CircNet

General Information

circRNA Basic Information

CircID	chr19:17582648\|17582788
Strand	-
CircType	exon
Host Gene	ENSG00000130309.9;
Algorism	CIRI2;
Sequence	AGACTCCCAGTTGGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:17582648\|17582788	hsa-miR-346	0	0	1
chr19:17582648\|17582788	hsa-miR-632	0	0	1
chr19:17582648\|17582788	hsa-miR-635	0	0	1
chr19:17582648\|17582788	hsa-miR-636	0	1	1
chr19:17582648\|17582788	hsa-miR-541-5p	0	0	1
chr19:17582648\|17582788	hsa-miR-541-3p	0	0	1
chr19:17582648\|17582788	hsa-miR-1231	0	0	1
chr19:17582648\|17582788	hsa-miR-1293	0	1	1
chr19:17582648\|17582788	hsa-miR-1262	0	0	1
chr19:17582648\|17582788	hsa-miR-654-5p	0	0	1
chr19:17582648\|17582788	hsa-miR-331-3p	0	0	1
chr19:17582648\|17582788	hsa-miR-642	0	0	1
chr19:17582648\|17582788	hsa-miR-218	0	0	1
chr19:17582648\|17582788	hsa-miR-608	1	0	0
chr19:17582648\|17582788	hsa-miR-1305	0	1	0
chr19:17582648\|17582788	hsa-miR-4447	0	1	0
chr19:17582648\|17582788	hsa-miR-4469	1	1	0
chr19:17582648\|17582788	hsa-miR-4525	0	1	0
chr19:17582648\|17582788	hsa-miR-5572	1	0	0
chr19:17582648\|17582788	hsa-miR-6077	0	1	0
chr19:17582648\|17582788	hsa-miR-92a-2-5p	0	1	0
chr19:17582648\|17582788	hsa-miR-6741-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-6821-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-4638-3p	1	1	0
chr19:17582648\|17582788	hsa-miR-6811-3p	1	1	0
chr19:17582648\|17582788	hsa-miR-1914-5p	0	1	0
chr19:17582648\|17582788	hsa-miR-676-5p	0	1	0
chr19:17582648\|17582788	hsa-miR-6841-5p	0	1	0
chr19:17582648\|17582788	hsa-miR-6737-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-6756-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-6774-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-328-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-4701-3p	1	0	0
chr19:17582648\|17582788	hsa-miR-6887-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-6885-5p	1	0	0
chr19:17582648\|17582788	hsa-miR-4472	1	1	0
chr19:17582648\|17582788	hsa-miR-6737-3p	0	1	0
chr19:17582648\|17582788	hsa-miR-10522-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:17582648\|17582788
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MYPRSSELCADNIPPPPKREGSSSATRGKHR
Nucleotide Sequence	CTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGG

CircID	chr19:17582648\|17582788
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MTEFDSSCTLGRLSCVQTTSPHHPRGRVALPPPGASTG
Nucleotide Sequence	TTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAGACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGT

CircID	chr19:17582648\|17582788
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MCLPLVAEELPSLLGGGGMLSAHSSDDRGYRKNQTQSTILQPNWES
Nucleotide Sequence	CTGTGCTTGCCCCTGGTGGCGGAAGAGCTACCCTCCCTCTTGGGTGGTGGGGGGATGTTGTCTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCAACTGGGAGTCT

CircID	chr19:17582648\|17582788
ORF Type	ORF4
Protein Length	25
Nucleotide Length	75
Protein Sequence	MHTAQTTEGTGRIKLSQPFFNPTGS
Nucleotide Sequence	CTGCACACAGCTCAGACGACCGAGGGTACAGGAAGAATCAAACTCAGTCAACCATTCTTCAACCCAACTGGGAGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information