CircRNA Information

General Information
circRNA Basic Information
CircID chr19:18162995|18163313
Strand +
CircType exon
Host Gene ENSG00000105647.13;
Algorism CIRI2;
Sequence CTTAAGCTGGGCGCCCACTGCCTCCACGCTGTCCTCCTTGACAATCTGGTCCTGGAGATACGTGGCGGAATGAGGGGAGATGCATAGCCTGGTCGGGTCTACCTAGGAAACTGAGGCCTGGGGCCAGCCAGGTGCTACCCTCCCTGGCTCCCAGGCCAGCACGGACCTGCTGGTATTTGGACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAGGTGAGTGGCTCTGAGAAGCCATAGTGCCCATCTCGGTGGAAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:18162995|18163313 hsa-miR-29a-5p 0 0 1
chr19:18162995|18163313 hsa-miR-29a-3p 0 0 1
chr19:18162995|18163313 hsa-miR-10a-5p 0 0 1
chr19:18162995|18163313 hsa-miR-10a-3p 0 0 1
chr19:18162995|18163313 hsa-miR-10b-5p 0 0 1
chr19:18162995|18163313 hsa-miR-10b-3p 0 0 1
chr19:18162995|18163313 hsa-miR-34a-5p 0 0 1
chr19:18162995|18163313 hsa-miR-34a-3p 0 0 1
chr19:18162995|18163313 hsa-miR-214-5p 0 0 1
chr19:18162995|18163313 hsa-miR-214-3p 0 0 1
chr19:18162995|18163313 hsa-miR-29c-5p 0 0 1
chr19:18162995|18163313 hsa-miR-29c-3p 0 0 1
chr19:18162995|18163313 hsa-miR-34b-5p 0 0 1
chr19:18162995|18163313 hsa-miR-34b-3p 0 0 1
chr19:18162995|18163313 hsa-miR-379-5p 0 0 1
chr19:18162995|18163313 hsa-miR-379-3p 0 0 1
chr19:18162995|18163313 hsa-miR-326 0 0 1
chr19:18162995|18163313 hsa-miR-135b-5p 0 0 1
chr19:18162995|18163313 hsa-miR-135b-3p 0 0 1
chr19:18162995|18163313 hsa-miR-384 0 0 1
chr19:18162995|18163313 hsa-miR-196b-5p 0 0 1
chr19:18162995|18163313 hsa-miR-196b-3p 0 0 1
chr19:18162995|18163313 hsa-miR-449a 0 1 1
chr19:18162995|18163313 hsa-miR-492 0 0 1
chr19:18162995|18163313 hsa-miR-586 0 0 1
chr19:18162995|18163313 hsa-miR-593-5p 0 0 1
chr19:18162995|18163313 hsa-miR-593-3p 0 0 1
chr19:18162995|18163313 hsa-miR-634 0 0 1
chr19:18162995|18163313 hsa-miR-650 0 1 1
chr19:18162995|18163313 hsa-miR-661 0 0 1
chr19:18162995|18163313 hsa-miR-449b-5p 0 0 1
chr19:18162995|18163313 hsa-miR-449b-3p 0 0 1
chr19:18162995|18163313 hsa-miR-766-5p 0 0 1
chr19:18162995|18163313 hsa-miR-766-3p 0 0 1
chr19:18162995|18163313 hsa-miR-665 0 0 1
chr19:18162995|18163313 hsa-miR-920 0 0 1
chr19:18162995|18163313 hsa-miR-1237-5p 0 0 1
chr19:18162995|18163313 hsa-miR-1237-3p 0 0 1
chr19:18162995|18163313 hsa-miR-1321 0 0 1
chr19:18162995|18163313 hsa-miR-1827 0 0 1
chr19:18162995|18163313 hsa-miR-770-5p 0 1 1
chr19:18162995|18163313 hsa-miR-767-3p 1 0 1
chr19:18162995|18163313 hsa-miR-34c-3p 0 1 1
chr19:18162995|18163313 hsa-miR-330-5p 0 0 1
chr19:18162995|18163313 hsa-miR-34c-5p 0 0 1
chr19:18162995|18163313 hsa-miR-135a 0 0 1
chr19:18162995|18163313 hsa-miR-196a 0 0 1
chr19:18162995|18163313 hsa-miR-29b 0 0 1
chr19:18162995|18163313 hsa-miR-219-5p 0 0 1
chr19:18162995|18163313 hsa-miR-612 0 1 0
chr19:18162995|18163313 hsa-miR-935 1 0 0
chr19:18162995|18163313 hsa-miR-3176 0 1 0
chr19:18162995|18163313 hsa-miR-4443 0 1 0
chr19:18162995|18163313 hsa-miR-4512 1 0 0
chr19:18162995|18163313 hsa-miR-4523 1 1 0
chr19:18162995|18163313 hsa-miR-4706 1 1 0
chr19:18162995|18163313 hsa-miR-4739 0 1 0
chr19:18162995|18163313 hsa-miR-5682 0 1 0
chr19:18162995|18163313 hsa-miR-6072 0 1 0
chr19:18162995|18163313 hsa-miR-7974 1 0 0
chr19:18162995|18163313 hsa-miR-12118 0 1 0
chr19:18162995|18163313 hsa-miR-12121 1 0 0
chr19:18162995|18163313 hsa-miR-4726-3p 1 0 0
chr19:18162995|18163313 hsa-miR-205-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6880-5p 0 1 0
chr19:18162995|18163313 hsa-miR-4695-5p 1 1 0
chr19:18162995|18163313 hsa-miR-7154-3p 0 1 0
chr19:18162995|18163313 hsa-miR-505-5p 0 1 0
chr19:18162995|18163313 hsa-miR-874-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6842-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6827-5p 0 1 0
chr19:18162995|18163313 hsa-miR-4793-3p 1 0 0
chr19:18162995|18163313 hsa-miR-6765-3p 1 1 0
chr19:18162995|18163313 hsa-miR-6815-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6835-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6772-3p 1 1 0
chr19:18162995|18163313 hsa-miR-885-3p 0 1 0
chr19:18162995|18163313 hsa-miR-3191-5p 0 1 0
chr19:18162995|18163313 hsa-miR-3677-3p 1 0 0
chr19:18162995|18163313 hsa-miR-4638-3p 0 1 0
chr19:18162995|18163313 hsa-miR-4776-5p 0 1 0
chr19:18162995|18163313 hsa-miR-5571-3p 0 1 0
chr19:18162995|18163313 hsa-miR-1911-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6804-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6828-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6869-3p 1 0 0
chr19:18162995|18163313 hsa-miR-6865-3p 1 0 0
chr19:18162995|18163313 hsa-miR-6826-3p 0 1 0
chr19:18162995|18163313 hsa-miR-7113-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6750-3p 1 1 0
chr19:18162995|18163313 hsa-miR-4650-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6754-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6780a-5p 0 1 0
chr19:18162995|18163313 hsa-miR-449c-5p 0 1 0
chr19:18162995|18163313 hsa-miR-4632-5p 0 1 0
chr19:18162995|18163313 hsa-miR-6883-5p 0 1 0
chr19:18162995|18163313 hsa-miR-10396a-3p 1 0 0
chr19:18162995|18163313 hsa-miR-10396b-3p 1 0 0
chr19:18162995|18163313 hsa-miR-324-3p 1 0 0
chr19:18162995|18163313 hsa-miR-3173-3p 0 1 0
chr19:18162995|18163313 hsa-miR-6862-3p 1 0 0
chr19:18162995|18163313 hsa-miR-3085-3p 0 1 0
chr19:18162995|18163313 hsa-miR-3619-5p 0 1 0
chr19:18162995|18163313 hsa-miR-2682-5p 0 1 0
chr19:18162995|18163313 hsa-miR-3927-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:18162995|18163313
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MGAHCLHAVLLDNLVLEIRGGMRGDA
Nucleotide Sequence CTGGGCGCCCACTGCCTCCACGCTGTCCTCCTTGACAATCTGGTCCTGGAGATACGTGGCGGAATGAGGGGAGATGCATAG

CircID chr19:18162995|18163313
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MGPARCYPPWLPGQHGPAGIWTQGRGAVCPAWHCTGPETRGGSD
Nucleotide Sequence CTGGGGCCAGCCAGGTGCTACCCTCCCTGGCTCCCAGGCCAGCACGGACCTGCTGGTATTTGGACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTGATTGA

CircID chr19:18162995|18163313
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MLVFGHRVEEPCVQLGIVLGQRLVAVVIDEVHNGAEGEWL
Nucleotide Sequence CTGCTGGTATTTGGACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAGGTGAGTGGCTCTGA

CircID chr19:18162995|18163313
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MRPGASQVLPSLAPRPARTCWYLDTG
Nucleotide Sequence CTGAGGCCTGGGGCCAGCCAGGTGCTACCCTCCCTGGCTCCCAGGCCAGCACGGACCTGCTGGTATTTGGACACAGGGTAG

CircID chr19:18162995|18163313
ORF Type ORF5
Protein Length 75
Nucleotide Length 228
Protein Sequence MAQYNAKLDTRLLYPVSKYQQVRAGLGAREGSTWLAPGLSFLGRPDQAMHLPSFRHVSPGPDCQGGQRGGSGRPA
Nucleotide Sequence CTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGTCCAAATACCAGCAGGTCCGTGCTGGCCTGGGAGCCAGGGAGGGTAGCACCTGGCTGGCCCCAGGCCTCAGTTTCCTAGGTAGACCCGACCAGGCTATGCATCTCCCCTCATTCCGCCACGTATCTCCAGGACCAGATTGTCAAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTTAA

CircID chr19:18162995|18163313
ORF Type ORF6
Protein Length 67
Nucleotide Length 204
Protein Sequence MGTMASQSHSPSAPLWTSSITTATSLWPSTMPSWTHGSSTLCPNTSRSVLAWEPGRVAPGWPQASVS
Nucleotide Sequence ATGGGCACTATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGTCCAAATACCAGCAGGTCCGTGCTGGCCTGGGAGCCAGGGAGGGTAGCACCTGGCTGGCCCCAGGCCTCAGTTTCCTAG

CircID chr19:18162995|18163313
ORF Type ORF7
Protein Length 45
Nucleotide Length 138
Protein Sequence MLRCGPHQSLPPRVSGPVQCQAGHTAPLPCVQIPAGPCWPGSQGG
Nucleotide Sequence CTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGTCCAAATACCAGCAGGTCCGTGCTGGCCTGGGAGCCAGGGAGGGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites