CircRNA Information

General Information
circRNA Basic Information
CircID chr19:18169303|18169510
Strand +
CircType exon
Host Gene ENSG00000105647.13;
Algorism CIRI2;
Sequence AGGGGCCAAGAAAGACAGAGAAAAGGAGACAGAGGGAGATCTGGAGAATGGGGGAGGGAAGGAAAGAGAAAGAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:18169303|18169510 hsa-miR-149-5p 0 0 1
chr19:18169303|18169510 hsa-miR-149-3p 0 0 1
chr19:18169303|18169510 hsa-miR-328-5p 0 0 1
chr19:18169303|18169510 hsa-miR-328-3p 0 0 1
chr19:18169303|18169510 hsa-miR-511-5p 0 0 1
chr19:18169303|18169510 hsa-miR-511-3p 0 0 1
chr19:18169303|18169510 hsa-miR-578 0 0 1
chr19:18169303|18169510 hsa-miR-604 0 0 1
chr19:18169303|18169510 hsa-miR-766-5p 0 0 1
chr19:18169303|18169510 hsa-miR-766-3p 0 0 1
chr19:18169303|18169510 hsa-miR-760 1 1 1
chr19:18169303|18169510 hsa-miR-1229-5p 0 0 1
chr19:18169303|18169510 hsa-miR-1229-3p 0 0 1
chr19:18169303|18169510 hsa-miR-296-5p 0 0 1
chr19:18169303|18169510 hsa-miR-615-5p 0 1 1
chr19:18169303|18169510 hsa-miR-485-5p 0 0 1
chr19:18169303|18169510 hsa-miR-361-3p 0 0 1
chr19:18169303|18169510 hsa-miR-331-3p 0 1 1
chr19:18169303|18169510 hsa-miR-515-5p 0 0 1
chr19:18169303|18169510 hsa-miR-642 0 0 1
chr19:18169303|18169510 hsa-miR-663a 1 1 0
chr19:18169303|18169510 hsa-miR-762 1 0 0
chr19:18169303|18169510 hsa-miR-2861 1 0 0
chr19:18169303|18169510 hsa-miR-3181 1 0 0
chr19:18169303|18169510 hsa-miR-4326 1 0 0
chr19:18169303|18169510 hsa-miR-4292 0 1 0
chr19:18169303|18169510 hsa-miR-4290 1 0 0
chr19:18169303|18169510 hsa-miR-3615 1 0 0
chr19:18169303|18169510 hsa-miR-4449 1 0 0
chr19:18169303|18169510 hsa-miR-4467 1 1 0
chr19:18169303|18169510 hsa-miR-4469 1 0 0
chr19:18169303|18169510 hsa-miR-3960 1 1 0
chr19:18169303|18169510 hsa-miR-5193 1 0 0
chr19:18169303|18169510 hsa-miR-5787 1 0 0
chr19:18169303|18169510 hsa-miR-6860 1 0 0
chr19:18169303|18169510 hsa-miR-8072 0 1 0
chr19:18169303|18169510 hsa-miR-12125 1 0 0
chr19:18169303|18169510 hsa-miR-6749-3p 1 0 0
chr19:18169303|18169510 hsa-miR-18a-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6747-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6836-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6894-5p 1 0 0
chr19:18169303|18169510 hsa-miR-1972 1 0 0
chr19:18169303|18169510 hsa-miR-6892-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6881-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6875-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4677-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6873-3p 1 1 0
chr19:18169303|18169510 hsa-miR-7110-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6726-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6832-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6845-3p 1 0 0
chr19:18169303|18169510 hsa-miR-877-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6827-5p 0 1 0
chr19:18169303|18169510 hsa-miR-942-5p 1 0 0
chr19:18169303|18169510 hsa-miR-4753-3p 1 1 0
chr19:18169303|18169510 hsa-miR-4713-5p 1 0 0
chr19:18169303|18169510 hsa-miR-939-3p 0 1 0
chr19:18169303|18169510 hsa-miR-4707-3p 0 1 0
chr19:18169303|18169510 hsa-miR-6803-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4691-3p 0 1 0
chr19:18169303|18169510 hsa-miR-5001-3p 1 0 0
chr19:18169303|18169510 hsa-miR-7113-3p 1 0 0
chr19:18169303|18169510 hsa-miR-3667-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6771-5p 0 1 0
chr19:18169303|18169510 hsa-miR-3191-5p 1 0 0
chr19:18169303|18169510 hsa-miR-4743-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6809-3p 1 1 0
chr19:18169303|18169510 hsa-miR-7111-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6780a-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6830-3p 0 1 0
chr19:18169303|18169510 hsa-miR-5196-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4667-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6739-3p 1 0 0
chr19:18169303|18169510 hsa-miR-1304-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6870-3p 1 0 0
chr19:18169303|18169510 hsa-miR-211-5p 1 1 0
chr19:18169303|18169510 hsa-miR-1237-3p 1 0 0
chr19:18169303|18169510 hsa-miR-1236-3p 1 0 0
chr19:18169303|18169510 hsa-miR-3180-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6867-3p 1 1 0
chr19:18169303|18169510 hsa-miR-1224-3p 1 0 0
chr19:18169303|18169510 hsa-miR-2276-5p 1 1 0
chr19:18169303|18169510 hsa-miR-6752-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4632-3p 0 1 0
chr19:18169303|18169510 hsa-miR-6746-3p 0 1 0
chr19:18169303|18169510 hsa-miR-7848-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6865-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6826-3p 1 0 0
chr19:18169303|18169510 hsa-miR-5088-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6777-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6794-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6802-3p 1 0 0
chr19:18169303|18169510 hsa-miR-3124-3p 0 1 0
chr19:18169303|18169510 hsa-miR-204-5p 1 1 0
chr19:18169303|18169510 hsa-miR-130b-5p 1 0 0
chr19:18169303|18169510 hsa-miR-7152-5p 1 0 0
chr19:18169303|18169510 hsa-miR-3620-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6734-3p 1 1 0
chr19:18169303|18169510 hsa-miR-222-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4639-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6780b-3p 1 0 0
chr19:18169303|18169510 hsa-miR-642a-5p 1 0 0
chr19:18169303|18169510 hsa-miR-2116-3p 1 0 0
chr19:18169303|18169510 hsa-miR-3162-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6888-3p 0 1 0
chr19:18169303|18169510 hsa-miR-6885-3p 1 0 0
chr19:18169303|18169510 hsa-miR-4652-3p 1 0 0
chr19:18169303|18169510 hsa-miR-10400-5p 1 1 0
chr19:18169303|18169510 hsa-miR-6787-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6851-5p 1 0 0
chr19:18169303|18169510 hsa-miR-320a-5p 1 1 0
chr19:18169303|18169510 hsa-miR-892c-3p 1 0 0
chr19:18169303|18169510 hsa-miR-10396b-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6848-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6724-5p 1 1 0
chr19:18169303|18169510 hsa-miR-6791-5p 1 1 0
chr19:18169303|18169510 hsa-miR-6762-5p 1 1 0
chr19:18169303|18169510 hsa-miR-6511a-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6784-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6792-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6862-3p 1 1 0
chr19:18169303|18169510 hsa-miR-4723-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6511b-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6884-5p 0 1 0
chr19:18169303|18169510 hsa-miR-6500-5p 1 0 0
chr19:18169303|18169510 hsa-miR-6833-3p 1 1 0
chr19:18169303|18169510 hsa-miR-6843-3p 1 0 0
chr19:18169303|18169510 hsa-miR-6814-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:18169303|18169510
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MRTPGCGWSGPWLPPPQPPAQTGPGAALLGAG
Nucleotide Sequence ATGAGGACCCCTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGT

CircID chr19:18169303|18169510
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MDVAGLVRGSRRRSLRRRRAQGRLCLGRV
Nucleotide Sequence CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTC

CircID chr19:18169303|18169510
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MGEGRKEKEGERTPNKSQSRRNEDPWMWLVWSVAPAAAASGADGPRGGSAWGG
Nucleotide Sequence ATGGGGGAGGGAAGGAAAGAGAAAGAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGG

CircID chr19:18169303|18169510
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MGPSAPEAAAAGATDQTSHIQGSSFLRLWLLFGVLSPSFSFLPSPILQISLCLLFSVFLGP
Nucleotide Sequence CTGGGCCCGTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTCTTTCTCTTTCCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCTCCTTTTCTCTGTCTTTCTTGGCCCC

CircID chr19:18169303|18169510
ORF Type ORF5
Protein Length 58
Nucleotide Length 174
Protein Sequence MRRRLRRREPRTRPATSRGPHFSGSGSCLGFSHPLSLSFPPPFSRSPSVSFSLSFLAP
Nucleotide Sequence CTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTCTTTCTCTTTCCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCTCCTTTTCTCTGTCTTTCTTGGCCCCT

CircID chr19:18169303|18169510
ORF Type ORF6
Protein Length 33
Nucleotide Length 99
Protein Sequence MALVWGSLTLFLFPSLPHSPDLPLSPFLCLSWP
Nucleotide Sequence CTGGCTCTTGTTTGGGGTTCTCTCACCCTCTTTCTCTTTCCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCTCCTTTTCTCTGTCTTTCTTGGCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites