CircRNA Information

General Information
circRNA Basic Information
CircID chr19:18927844|18928202
Strand +
CircType exon
Host Gene ENSG00000105671.10;
Algorism CIRI2;
Sequence CTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTGGCACAGGGAGGACCAGGGGATGGCTGAGCTGGCGGCCCCCGCCAGGGAACCTGGCCACCCACCCCCTACCTGCGGGCTCGGCCCTCACCTTCCCCTCCAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTCTGGTGGAGGGAAGTGGGGTAAGGAGATGCTGGTCACGGGGGCCCCACCTGGAAGGGAGCACCCCCGGCCCTGGAGAGCACTTTAGTTCCTGCCCGCCTCTGACACTCACGATCTCACACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:18927844|18928202 hsa-miR-17-5p 0 0 1
chr19:18927844|18928202 hsa-miR-17-3p 0 0 1
chr19:18927844|18928202 hsa-miR-20a-5p 0 0 1
chr19:18927844|18928202 hsa-miR-20a-3p 0 0 1
chr19:18927844|18928202 hsa-miR-93-5p 0 0 1
chr19:18927844|18928202 hsa-miR-93-3p 0 0 1
chr19:18927844|18928202 hsa-miR-106a-5p 0 0 1
chr19:18927844|18928202 hsa-miR-106a-3p 0 0 1
chr19:18927844|18928202 hsa-miR-191-5p 0 0 1
chr19:18927844|18928202 hsa-miR-191-3p 0 0 1
chr19:18927844|18928202 hsa-miR-106b-5p 0 0 1
chr19:18927844|18928202 hsa-miR-106b-3p 0 0 1
chr19:18927844|18928202 hsa-miR-302a-5p 0 0 1
chr19:18927844|18928202 hsa-miR-302a-3p 0 0 1
chr19:18927844|18928202 hsa-miR-302b-5p 0 0 1
chr19:18927844|18928202 hsa-miR-302b-3p 0 0 1
chr19:18927844|18928202 hsa-miR-302c-5p 0 0 1
chr19:18927844|18928202 hsa-miR-302c-3p 0 0 1
chr19:18927844|18928202 hsa-miR-302d-5p 0 0 1
chr19:18927844|18928202 hsa-miR-302d-3p 0 0 1
chr19:18927844|18928202 hsa-miR-372-5p 0 0 1
chr19:18927844|18928202 hsa-miR-372-3p 0 0 1
chr19:18927844|18928202 hsa-miR-373-5p 0 0 1
chr19:18927844|18928202 hsa-miR-373-3p 0 0 1
chr19:18927844|18928202 hsa-miR-20b-5p 0 0 1
chr19:18927844|18928202 hsa-miR-20b-3p 0 0 1
chr19:18927844|18928202 hsa-miR-495-5p 0 0 1
chr19:18927844|18928202 hsa-miR-495-3p 0 0 1
chr19:18927844|18928202 hsa-miR-520e-5p 0 0 1
chr19:18927844|18928202 hsa-miR-520e-3p 0 0 1
chr19:18927844|18928202 hsa-miR-520b-5p 0 0 1
chr19:18927844|18928202 hsa-miR-520b-3p 0 0 1
chr19:18927844|18928202 hsa-miR-519d-5p 0 0 1
chr19:18927844|18928202 hsa-miR-519d-3p 0 0 1
chr19:18927844|18928202 hsa-miR-504-5p 0 0 1
chr19:18927844|18928202 hsa-miR-504-3p 0 0 1
chr19:18927844|18928202 hsa-miR-558 0 0 1
chr19:18927844|18928202 hsa-miR-608 1 1 1
chr19:18927844|18928202 hsa-miR-619-5p 0 0 1
chr19:18927844|18928202 hsa-miR-619-3p 0 0 1
chr19:18927844|18928202 hsa-miR-631 0 0 1
chr19:18927844|18928202 hsa-miR-634 0 0 1
chr19:18927844|18928202 hsa-miR-646 0 1 1
chr19:18927844|18928202 hsa-miR-650 0 0 1
chr19:18927844|18928202 hsa-miR-766-5p 0 0 1
chr19:18927844|18928202 hsa-miR-766-3p 0 0 1
chr19:18927844|18928202 hsa-miR-298 1 1 1
chr19:18927844|18928202 hsa-miR-873-5p 0 0 1
chr19:18927844|18928202 hsa-miR-873-3p 0 0 1
chr19:18927844|18928202 hsa-miR-1227-5p 0 0 1
chr19:18927844|18928202 hsa-miR-1227-3p 0 0 1
chr19:18927844|18928202 hsa-miR-1293 0 0 1
chr19:18927844|18928202 hsa-miR-302e 0 0 1
chr19:18927844|18928202 hsa-miR-296-5p 0 0 1
chr19:18927844|18928202 hsa-miR-615-3p 0 0 1
chr19:18927844|18928202 hsa-miR-339-5p 0 0 1
chr19:18927844|18928202 hsa-miR-574-5p 0 1 1
chr19:18927844|18928202 hsa-miR-331-3p 0 1 1
chr19:18927844|18928202 hsa-miR-338-3p 0 0 1
chr19:18927844|18928202 hsa-miR-342-5p 0 1 1
chr19:18927844|18928202 hsa-miR-520d-3p 0 1 1
chr19:18927844|18928202 hsa-miR-520a-3p 0 0 1
chr19:18927844|18928202 hsa-miR-520c-3p 0 0 1
chr19:18927844|18928202 hsa-miR-548b-3p 0 0 1
chr19:18927844|18928202 hsa-miR-1274a 0 0 1
chr19:18927844|18928202 hsa-miR-642 0 0 1
chr19:18927844|18928202 hsa-miR-1274b 0 0 1
chr19:18927844|18928202 hsa-miR-663 0 0 1
chr19:18927844|18928202 hsa-miR-638 1 0 0
chr19:18927844|18928202 hsa-miR-663a 1 1 0
chr19:18927844|18928202 hsa-miR-762 1 0 0
chr19:18927844|18928202 hsa-miR-1204 0 1 0
chr19:18927844|18928202 hsa-miR-1291 0 1 0
chr19:18927844|18928202 hsa-miR-1268a 1 0 0
chr19:18927844|18928202 hsa-miR-3154 1 0 0
chr19:18927844|18928202 hsa-miR-3621 1 0 0
chr19:18927844|18928202 hsa-miR-3665 1 0 0
chr19:18927844|18928202 hsa-miR-3907 0 1 0
chr19:18927844|18928202 hsa-miR-3918 0 1 0
chr19:18927844|18928202 hsa-miR-1268b 1 0 0
chr19:18927844|18928202 hsa-miR-4428 0 1 0
chr19:18927844|18928202 hsa-miR-4466 1 0 0
chr19:18927844|18928202 hsa-miR-4478 0 1 0
chr19:18927844|18928202 hsa-miR-4479 1 0 0
chr19:18927844|18928202 hsa-miR-4487 0 1 0
chr19:18927844|18928202 hsa-miR-4488 1 0 0
chr19:18927844|18928202 hsa-miR-4498 1 0 0
chr19:18927844|18928202 hsa-miR-4522 0 1 0
chr19:18927844|18928202 hsa-miR-4533 0 1 0
chr19:18927844|18928202 hsa-miR-4651 1 1 0
chr19:18927844|18928202 hsa-miR-4654 1 0 0
chr19:18927844|18928202 hsa-miR-4656 1 0 0
chr19:18927844|18928202 hsa-miR-4658 0 1 0
chr19:18927844|18928202 hsa-miR-4663 0 1 0
chr19:18927844|18928202 hsa-miR-4706 1 0 0
chr19:18927844|18928202 hsa-miR-4710 0 1 0
chr19:18927844|18928202 hsa-miR-4721 1 0 0
chr19:18927844|18928202 hsa-miR-4767 1 0 0
chr19:18927844|18928202 hsa-miR-6075 1 0 0
chr19:18927844|18928202 hsa-miR-6088 1 0 0
chr19:18927844|18928202 hsa-miR-6132 0 1 0
chr19:18927844|18928202 hsa-miR-4435 0 1 0
chr19:18927844|18928202 hsa-miR-6749-3p 0 1 0
chr19:18927844|18928202 hsa-miR-128-1-5p 0 1 0
chr19:18927844|18928202 hsa-miR-4726-3p 1 0 0
chr19:18927844|18928202 hsa-miR-6765-5p 1 0 0
chr19:18927844|18928202 hsa-miR-671-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1972 0 1 0
chr19:18927844|18928202 hsa-miR-6804-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6089 1 1 0
chr19:18927844|18928202 hsa-miR-6867-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4722-5p 1 0 0
chr19:18927844|18928202 hsa-miR-3677-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6741-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6721-5p 0 1 0
chr19:18927844|18928202 hsa-miR-138-1-3p 0 1 0
chr19:18927844|18928202 hsa-miR-1915-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6742-5p 1 0 0
chr19:18927844|18928202 hsa-miR-3151-5p 0 1 0
chr19:18927844|18928202 hsa-miR-3180-3p 1 0 0
chr19:18927844|18928202 hsa-miR-6748-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6793-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6732-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6805-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6782-5p 1 0 0
chr19:18927844|18928202 hsa-miR-5006-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6786-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1226-5p 1 1 0
chr19:18927844|18928202 hsa-miR-4738-3p 1 1 0
chr19:18927844|18928202 hsa-miR-1908-3p 0 1 0
chr19:18927844|18928202 hsa-miR-4640-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1908-5p 0 1 0
chr19:18927844|18928202 hsa-miR-7113-3p 0 1 0
chr19:18927844|18928202 hsa-miR-642b-5p 0 1 0
chr19:18927844|18928202 hsa-miR-4787-5p 1 0 0
chr19:18927844|18928202 hsa-miR-149-3p 1 0 0
chr19:18927844|18928202 hsa-miR-6824-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6789-5p 1 0 0
chr19:18927844|18928202 hsa-miR-146b-3p 0 1 0
chr19:18927844|18928202 hsa-miR-6886-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6781-5p 0 1 0
chr19:18927844|18928202 hsa-miR-7112-5p 1 1 0
chr19:18927844|18928202 hsa-miR-7152-3p 0 1 0
chr19:18927844|18928202 hsa-miR-3065-5p 0 1 0
chr19:18927844|18928202 hsa-miR-4732-3p 0 1 0
chr19:18927844|18928202 hsa-miR-6720-3p 1 0 0
chr19:18927844|18928202 hsa-miR-6801-5p 1 1 0
chr19:18927844|18928202 hsa-miR-1914-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6729-3p 0 1 0
chr19:18927844|18928202 hsa-miR-7159-5p 0 1 0
chr19:18927844|18928202 hsa-miR-3617-3p 1 0 0
chr19:18927844|18928202 hsa-miR-10400-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1207-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1233-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4763-3p 1 0 0
chr19:18927844|18928202 hsa-miR-6769b-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6787-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6816-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6865-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6870-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1343-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6737-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6743-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6752-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6756-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6803-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6813-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6815-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6819-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6842-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6851-5p 1 0 0
chr19:18927844|18928202 hsa-miR-7110-5p 0 1 0
chr19:18927844|18928202 hsa-miR-10401-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1249-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6751-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6797-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6808-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4685-3p 0 1 0
chr19:18927844|18928202 hsa-miR-3620-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4728-5p 1 0 0
chr19:18927844|18928202 hsa-miR-5196-5p 1 1 0
chr19:18927844|18928202 hsa-miR-6780b-5p 0 1 0
chr19:18927844|18928202 hsa-miR-10396b-5p 1 1 0
chr19:18927844|18928202 hsa-miR-1237-5p 1 0 0
chr19:18927844|18928202 hsa-miR-1909-3p 1 0 0
chr19:18927844|18928202 hsa-miR-328-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4649-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4685-5p 0 1 0
chr19:18927844|18928202 hsa-miR-4725-3p 0 1 0
chr19:18927844|18928202 hsa-miR-4745-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6794-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6795-5p 1 0 0
chr19:18927844|18928202 hsa-miR-6848-5p 1 0 0
chr19:18927844|18928202 hsa-miR-939-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4758-5p 1 0 0
chr19:18927844|18928202 hsa-miR-4664-5p 0 1 0
chr19:18927844|18928202 hsa-miR-3173-3p 0 1 0
chr19:18927844|18928202 hsa-miR-4747-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6766-5p 0 1 0
chr19:18927844|18928202 hsa-miR-6790-5p 1 1 0
chr19:18927844|18928202 hsa-miR-10394-5p 1 0 0
chr19:18927844|18928202 hsa-miR-9902 0 1 0
chr19:18927844|18928202 hsa-miR-6764-3p 0 1 0
chr19:18927844|18928202 hsa-miR-526b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:18927844|18928202
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MLDLGQLSLALGLQVRVLAQGGPGDG
Nucleotide Sequence CTGCTTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTGGCACAGGGAGGACCAGGGGATGGCTGA
CircID chr19:18927844|18928202
ORF Type ORF2
Protein Length 117
Nucleotide Length 351
Protein Sequence MKRRFFCLILASSALRLASRSGSWHREDQGMAELAAPAREPGHPPPTCGLGPHLPLQDQLLPFVDLLLFVKVGRLQFLVEGSGVRRCWSRGPHLEGSTPGPGEHFSSCPPLTLTISH
Nucleotide Sequence TTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTGGCACAGGGAGGACCAGGGGATGGCTGAGCTGGCGGCCCCCGCCAGGGAACCTGGCCACCCACCCCCTACCTGCGGGCTCGGCCCTCACCTTCCCCTCCAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTCTGGTGGAGGGAAGTGGGGTAAGGAGATGCTGGTCACGGGGGCCCCACCTGGAAGGGAGCACCCCCGGCCCTGGAGAGCACTTTAGTTCCTGCCCGCCTCTGACACTCACGATCTCACAC
CircID chr19:18927844|18928202
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MSWRPPPGNLATHPLPAGSALTFPSRISCFRLLISFFSSKWAASSFWWREVG
Nucleotide Sequence CTGAGCTGGCGGCCCCCGCCAGGGAACCTGGCCACCCACCCCCTACCTGCGGGCTCGGCCCTCACCTTCCCCTCCAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTCTGGTGGAGGGAAGTGGGGTAA
CircID chr19:18927844|18928202
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MEAAHFDEKKEINKRKQLILEGKVRAEPAGRGWVARFPGGGRQLSHPLVLPVPGP
Nucleotide Sequence CTGGAGGCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGATCCTGGAGGGGAAGGTGAGGGCCGAGCCCGCAGGTAGGGGGTGGGTGGCCAGGTTCCCTGGCGGGGGCCGCCAGCTCAGCCATCCCCTGGTCCTCCCTGTGCCAGGACCCTGA
CircID chr19:18927844|18928202
ORF Type ORF5
Protein Length 41
Nucleotide Length 123
Protein Sequence MAGAASSAIPWSSLCQDPDLEAKRKAELAKIKQKNRRFKEK
Nucleotide Sequence CTGGCGGGGGCCGCCAGCTCAGCCATCCCCTGGTCCTCCCTGTGCCAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab