CircRNA Information

General Information
circRNA Basic Information
CircID chr19:18994066|18994166
Strand -
CircType exon
Host Gene ENSG00000064607.15;
Algorism CIRI2;
Sequence ACGCACATCCACGGAGGCTGGCCTGGAGGCCTTGAGGGGCTCACAGCCGGGGCACCAGGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:18994066|18994166 hsa-miR-210-5p 0 0 1
chr19:18994066|18994166 hsa-miR-210-3p 0 0 1
chr19:18994066|18994166 hsa-miR-193b-5p 0 0 1
chr19:18994066|18994166 hsa-miR-193b-3p 0 0 1
chr19:18994066|18994166 hsa-miR-661 0 0 1
chr19:18994066|18994166 hsa-miR-1225-3p 0 1 1
chr19:18994066|18994166 hsa-miR-342-3p 0 0 1
chr19:18994066|18994166 hsa-miR-193a-3p 0 0 1
chr19:18994066|18994166 hsa-miR-1233 0 0 1
chr19:18994066|18994166 hsa-miR-1254 0 0 1
chr19:18994066|18994166 hsa-miR-596 1 0 0
chr19:18994066|18994166 hsa-miR-3907 1 0 0
chr19:18994066|18994166 hsa-miR-4449 1 0 0
chr19:18994066|18994166 hsa-miR-7974 0 1 0
chr19:18994066|18994166 hsa-miR-11400 0 1 0
chr19:18994066|18994166 hsa-miR-1972 0 1 0
chr19:18994066|18994166 hsa-miR-3663-5p 1 0 0
chr19:18994066|18994166 hsa-miR-3194-5p 0 1 0
chr19:18994066|18994166 hsa-miR-6735-3p 1 0 0
chr19:18994066|18994166 hsa-miR-4763-5p 0 1 0
chr19:18994066|18994166 hsa-miR-4640-5p 1 0 0
chr19:18994066|18994166 hsa-miR-6757-3p 0 1 0
chr19:18994066|18994166 hsa-miR-941 0 1 0
chr19:18994066|18994166 hsa-miR-6769a-3p 0 1 0
chr19:18994066|18994166 hsa-miR-4707-5p 1 0 0
chr19:18994066|18994166 hsa-miR-4749-3p 0 1 0
chr19:18994066|18994166 hsa-miR-4677-3p 0 1 0
chr19:18994066|18994166 hsa-miR-6743-5p 1 1 0
chr19:18994066|18994166 hsa-miR-4632-5p 1 1 0
chr19:18994066|18994166 hsa-miR-6729-5p 1 0 0
chr19:18994066|18994166 hsa-miR-6735-5p 0 1 0
chr19:18994066|18994166 hsa-miR-10396a-3p 1 0 0
chr19:18994066|18994166 hsa-miR-10396b-3p 1 0 0
chr19:18994066|18994166 hsa-miR-7843-5p 1 1 0
chr19:18994066|18994166 hsa-miR-6791-3p 1 0 0
chr19:18994066|18994166 hsa-miR-33b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:18994066|18994166
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MEALRGSQPGHQAGHAHLPLASVRFA
Nucleotide Sequence CTGGAGGCCTTGAGGGGCTCACAGCCGGGGCACCAGGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCT

CircID chr19:18994066|18994166
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MAKGRCAWPAWCPGCEPLKASRPASVDVR
Nucleotide Sequence CTGGCCAAGGGCAGATGCGCATGGCCTGCCTGGTGCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTGCGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites