CircRNA Information

General Information
circRNA Basic Information
CircID chr19:19025711|19025817
Strand -
CircType exon
Host Gene ENSG00000064607.15;
Algorism CIRI2;
Sequence CTCTGGCCTGGACTTGACTGCCGCCCCTAAGCACAGAGTCAGCCTCCCCAGGATGGTCCACGTCATAATCCCGACTCTCCTTCTCCAAACACTCTTTCTCAATCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:19025711|19025817 hsa-miR-345-5p 0 0 1
chr19:19025711|19025817 hsa-miR-345-3p 0 0 1
chr19:19025711|19025817 hsa-miR-539-5p 0 0 1
chr19:19025711|19025817 hsa-miR-539-3p 0 0 1
chr19:19025711|19025817 hsa-miR-580-5p 0 0 1
chr19:19025711|19025817 hsa-miR-580-3p 0 0 1
chr19:19025711|19025817 hsa-miR-620 0 0 1
chr19:19025711|19025817 hsa-miR-636 0 0 1
chr19:19025711|19025817 hsa-miR-939-5p 0 0 1
chr19:19025711|19025817 hsa-miR-939-3p 0 0 1
chr19:19025711|19025817 hsa-miR-1270 0 0 1
chr19:19025711|19025817 hsa-miR-485-5p 0 1 1
chr19:19025711|19025817 hsa-miR-1300 0 0 1
chr19:19025711|19025817 hsa-miR-218 0 0 1
chr19:19025711|19025817 hsa-miR-768-5p 0 0 1
chr19:19025711|19025817 hsa-miR-608 1 0 0
chr19:19025711|19025817 hsa-miR-611 1 0 0
chr19:19025711|19025817 hsa-miR-637 1 0 0
chr19:19025711|19025817 hsa-miR-765 1 0 0
chr19:19025711|19025817 hsa-miR-1182 1 0 0
chr19:19025711|19025817 hsa-miR-1258 1 0 0
chr19:19025711|19025817 hsa-miR-3125 1 0 0
chr19:19025711|19025817 hsa-miR-3153 1 0 0
chr19:19025711|19025817 hsa-miR-3154 1 1 0
chr19:19025711|19025817 hsa-miR-3185 1 0 0
chr19:19025711|19025817 hsa-miR-3188 1 0 0
chr19:19025711|19025817 hsa-miR-3196 1 1 0
chr19:19025711|19025817 hsa-miR-4298 1 0 0
chr19:19025711|19025817 hsa-miR-3929 0 1 0
chr19:19025711|19025817 hsa-miR-1268b 1 0 0
chr19:19025711|19025817 hsa-miR-4425 1 0 0
chr19:19025711|19025817 hsa-miR-4428 1 1 0
chr19:19025711|19025817 hsa-miR-4467 1 0 0
chr19:19025711|19025817 hsa-miR-4488 1 0 0
chr19:19025711|19025817 hsa-miR-4516 1 1 0
chr19:19025711|19025817 hsa-miR-4522 0 1 0
chr19:19025711|19025817 hsa-miR-4533 1 0 0
chr19:19025711|19025817 hsa-miR-3960 1 0 0
chr19:19025711|19025817 hsa-miR-4651 1 0 0
chr19:19025711|19025817 hsa-miR-4656 1 0 0
chr19:19025711|19025817 hsa-miR-4688 1 0 0
chr19:19025711|19025817 hsa-miR-4689 1 0 0
chr19:19025711|19025817 hsa-miR-4741 1 0 0
chr19:19025711|19025817 hsa-miR-5192 1 1 0
chr19:19025711|19025817 hsa-miR-5572 1 0 0
chr19:19025711|19025817 hsa-miR-5703 1 0 0
chr19:19025711|19025817 hsa-miR-6124 1 0 0
chr19:19025711|19025817 hsa-miR-6127 1 0 0
chr19:19025711|19025817 hsa-miR-6133 1 0 0
chr19:19025711|19025817 hsa-miR-8072 1 0 0
chr19:19025711|19025817 hsa-miR-8085 1 0 0
chr19:19025711|19025817 hsa-miR-8089 1 0 0
chr19:19025711|19025817 hsa-miR-12118 1 0 0
chr19:19025711|19025817 hsa-miR-4433b-3p 1 0 0
chr19:19025711|19025817 hsa-miR-4433a-3p 1 0 0
chr19:19025711|19025817 hsa-miR-6861-5p 1 0 0
chr19:19025711|19025817 hsa-miR-7106-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6825-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6894-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6857-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6799-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6833-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6515-5p 1 0 0
chr19:19025711|19025817 hsa-miR-7847-3p 1 0 0
chr19:19025711|19025817 hsa-miR-6871-5p 1 0 0
chr19:19025711|19025817 hsa-miR-3180-3p 1 0 0
chr19:19025711|19025817 hsa-miR-185-3p 1 0 0
chr19:19025711|19025817 hsa-miR-6805-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6782-5p 1 0 0
chr19:19025711|19025817 hsa-miR-3150b-3p 1 0 0
chr19:19025711|19025817 hsa-miR-1343-3p 0 1 0
chr19:19025711|19025817 hsa-miR-6740-5p 1 0 0
chr19:19025711|19025817 hsa-miR-1229-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6771-5p 1 0 0
chr19:19025711|19025817 hsa-miR-149-3p 1 0 0
chr19:19025711|19025817 hsa-miR-6824-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6789-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4776-5p 0 1 0
chr19:19025711|19025817 hsa-miR-3619-3p 1 1 0
chr19:19025711|19025817 hsa-miR-10400-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6787-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6816-5p 1 1 0
chr19:19025711|19025817 hsa-miR-1343-5p 1 0 0
chr19:19025711|19025817 hsa-miR-3180 1 0 0
chr19:19025711|19025817 hsa-miR-6737-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6756-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6813-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6819-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6851-5p 1 0 0
chr19:19025711|19025817 hsa-miR-7107-5p 1 0 0
chr19:19025711|19025817 hsa-miR-11181-3p 1 0 0
chr19:19025711|19025817 hsa-miR-6763-5p 1 0 0
chr19:19025711|19025817 hsa-miR-7111-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4728-5p 1 0 0
chr19:19025711|19025817 hsa-miR-5196-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6780b-5p 1 0 0
chr19:19025711|19025817 hsa-miR-1237-5p 1 0 0
chr19:19025711|19025817 hsa-miR-328-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4725-3p 1 0 0
chr19:19025711|19025817 hsa-miR-4745-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6777-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6846-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6848-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6858-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6889-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4697-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6831-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6731-5p 1 1 0
chr19:19025711|19025817 hsa-miR-6758-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4700-5p 0 1 0
chr19:19025711|19025817 hsa-miR-4747-5p 1 1 0
chr19:19025711|19025817 hsa-miR-6891-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6791-5p 1 0 0
chr19:19025711|19025817 hsa-miR-4756-5p 1 0 0
chr19:19025711|19025817 hsa-miR-6884-5p 0 1 0
chr19:19025711|19025817 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:19025711|19025817
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MDLTAAPKHRVSLPRMVHVIIPTLLLQTLFLNQ
Nucleotide Sequence CTGGACTTGACTGCCGCCCCTAAGCACAGAGTCAGCCTCCCCAGGATGGTCCACGTCATAATCCCGACTCTCCTTCTCCAAACACTCTTTCTCAATCAG
CircID chr19:19025711|19025817
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence LIEKECLEKESRDYDVDHPGEADSVLRGGSQVQAR
Nucleotide Sequence CTGATTGAGAAAGAGTGTTTGGAGAAGGAGAGTCGGGATTATGACGTGGACCATCCTGGGGAGGCTGACTCTGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGA
CircID chr19:19025711|19025817
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MRKSVWRRRVGIMTWTILGRLTLCLGAAVKSRPE
Nucleotide Sequence TTGAGAAAGAGTGTTTGGAGAAGGAGAGTCGGGATTATGACGTGGACCATCCTGGGGAGGCTGACTCTGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab