CircRNA Information

General Information
circRNA Basic Information
CircID chr19:2272781|2273052
Strand -
CircType exon
Host Gene ENSG00000104904.11;
Algorism CIRI2;
Sequence CATGTCTTCATTTGCTTCCACAAGAACCGCGAGGACAGAGGTAGGTGACCCGTATCGCCTGCAGTAGGGTGCGTGGGGGTGCCTGCGCCGCCCCTTCATTCTCAGCCCGCAGGCACGGTCTCCCTGCGGGGGTGGGGGGTGCGGGCGGGGGGTTCTGGTCGGCAGGGGTTCTGACGGCTTCTCCCCCGCAGCCGCCTTGCTCCGAACCTTCAGCTTTTTGGGCTTTGAGATTGTGAGACCGGGGCATCCCCTTGTCCCCAAGAGACCCGACG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:2272781|2273052 hsa-miR-216a-5p 0 0 1
chr19:2272781|2273052 hsa-miR-216a-3p 0 0 1
chr19:2272781|2273052 hsa-miR-217-5p 0 0 1
chr19:2272781|2273052 hsa-miR-217-3p 0 0 1
chr19:2272781|2273052 hsa-miR-320a-5p 0 0 1
chr19:2272781|2273052 hsa-miR-320a-3p 0 0 1
chr19:2272781|2273052 hsa-miR-493-5p 0 0 1
chr19:2272781|2273052 hsa-miR-493-3p 0 0 1
chr19:2272781|2273052 hsa-miR-578 0 0 1
chr19:2272781|2273052 hsa-miR-580-5p 0 0 1
chr19:2272781|2273052 hsa-miR-580-3p 0 0 1
chr19:2272781|2273052 hsa-miR-581 0 0 1
chr19:2272781|2273052 hsa-miR-604 0 0 1
chr19:2272781|2273052 hsa-miR-635 0 0 1
chr19:2272781|2273052 hsa-miR-641 0 0 1
chr19:2272781|2273052 hsa-miR-744-5p 0 0 1
chr19:2272781|2273052 hsa-miR-744-3p 0 0 1
chr19:2272781|2273052 hsa-miR-1205 0 0 1
chr19:2272781|2273052 hsa-miR-671-5p 1 0 1
chr19:2272781|2273052 hsa-miR-330-3p 0 0 1
chr19:2272781|2273052 hsa-miR-320b 0 1 1
chr19:2272781|2273052 hsa-miR-320c 0 1 1
chr19:2272781|2273052 hsa-miR-320d 0 1 1
chr19:2272781|2273052 hsa-miR-509-3-5p 0 0 1
chr19:2272781|2273052 hsa-miR-509-5p 0 0 1
chr19:2272781|2273052 hsa-miR-342-3p 0 0 1
chr19:2272781|2273052 hsa-miR-371-5p 0 0 1
chr19:2272781|2273052 hsa-miR-550 0 0 1
chr19:2272781|2273052 hsa-miR-768-3p 0 0 1
chr19:2272781|2273052 hsa-miR-1275 0 1 0
chr19:2272781|2273052 hsa-miR-1470 1 1 0
chr19:2272781|2273052 hsa-miR-3175 0 1 0
chr19:2272781|2273052 hsa-miR-3196 0 1 0
chr19:2272781|2273052 hsa-miR-4516 0 1 0
chr19:2272781|2273052 hsa-miR-3960 1 0 0
chr19:2272781|2273052 hsa-miR-4656 0 1 0
chr19:2272781|2273052 hsa-miR-4657 1 0 0
chr19:2272781|2273052 hsa-miR-4706 1 0 0
chr19:2272781|2273052 hsa-miR-4734 1 1 0
chr19:2272781|2273052 hsa-miR-4739 1 0 0
chr19:2272781|2273052 hsa-miR-4741 1 0 0
chr19:2272781|2273052 hsa-miR-5572 1 0 0
chr19:2272781|2273052 hsa-miR-5703 0 1 0
chr19:2272781|2273052 hsa-miR-6081 1 0 0
chr19:2272781|2273052 hsa-miR-7974 1 0 0
chr19:2272781|2273052 hsa-miR-8089 1 1 0
chr19:2272781|2273052 hsa-miR-370-3p 0 1 0
chr19:2272781|2273052 hsa-miR-93-3p 0 1 0
chr19:2272781|2273052 hsa-miR-7106-5p 1 0 0
chr19:2272781|2273052 hsa-miR-210-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6833-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6089 1 0 0
chr19:2272781|2273052 hsa-miR-1225-3p 1 1 0
chr19:2272781|2273052 hsa-miR-4722-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6727-5p 1 1 0
chr19:2272781|2273052 hsa-miR-23a-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6798-5p 1 1 0
chr19:2272781|2273052 hsa-miR-6760-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6810-5p 0 1 0
chr19:2272781|2273052 hsa-miR-7108-3p 0 1 0
chr19:2272781|2273052 hsa-miR-6749-5p 1 0 0
chr19:2272781|2273052 hsa-miR-193a-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6789-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6886-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6878-5p 0 1 0
chr19:2272781|2273052 hsa-miR-339-5p 0 1 0
chr19:2272781|2273052 hsa-miR-450a-2-3p 0 1 0
chr19:2272781|2273052 hsa-miR-4708-3p 1 1 0
chr19:2272781|2273052 hsa-miR-4687-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6752-3p 0 1 0
chr19:2272781|2273052 hsa-miR-7113-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6798-3p 0 1 0
chr19:2272781|2273052 hsa-miR-6729-3p 0 1 0
chr19:2272781|2273052 hsa-miR-579-5p 0 1 0
chr19:2272781|2273052 hsa-miR-10400-5p 0 1 0
chr19:2272781|2273052 hsa-miR-1207-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6769b-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6816-5p 1 1 0
chr19:2272781|2273052 hsa-miR-6754-5p 1 1 0
chr19:2272781|2273052 hsa-miR-6815-5p 0 1 0
chr19:2272781|2273052 hsa-miR-7111-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6836-5p 1 0 0
chr19:2272781|2273052 hsa-miR-328-5p 1 0 0
chr19:2272781|2273052 hsa-miR-4725-3p 0 1 0
chr19:2272781|2273052 hsa-miR-365a-5p 1 0 0
chr19:2272781|2273052 hsa-miR-6511b-5p 0 1 0
chr19:2272781|2273052 hsa-miR-10396a-3p 0 1 0
chr19:2272781|2273052 hsa-miR-10396b-3p 0 1 0
chr19:2272781|2273052 hsa-miR-4664-5p 1 0 0
chr19:2272781|2273052 hsa-miR-550a-3-5p 0 1 0
chr19:2272781|2273052 hsa-miR-550a-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6801-3p 0 1 0
chr19:2272781|2273052 hsa-miR-6810-3p 0 1 0
chr19:2272781|2273052 hsa-miR-10394-5p 0 1 0
chr19:2272781|2273052 hsa-miR-6771-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:2272781|2273052
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MRRPFILSPQARSPCGGGGCGRGVLVGRGSDGFSPAAALLRTFSFLGFEIVRPGHPLVPKRPD
Nucleotide Sequence CTGCGCCGCCCCTTCATTCTCAGCCCGCAGGCACGGTCTCCCTGCGGGGGTGGGGGGTGCGGGCGGGGGGTTCTGGTCGGCAGGGGTTCTGACGGCTTCTCCCCCGCAGCCGCCTTGCTCCGAACCTTCAGCTTTTTGGGCTTTGAGATTGTGAGACCGGGGCATCCCCTTGTCCCCAAGAGACCCGAC
CircID chr19:2272781|2273052
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MRGRSRQNPCRPEPPARTPHPRRETVPAG
Nucleotide Sequence CTGCGGGGGAGAAGCCGTCAGAACCCCTGCCGACCAGAACCCCCCGCCCGCACCCCCCACCCCCGCAGGGAGACCGTGCCTGCGGGCTGA
CircID chr19:2272781|2273052
ORF Type ORF3
Protein Length 79
Nucleotide Length 240
Protein Sequence MPRSHNLKAQKAEGSEQGGCGGEAVRTPADQNPPPAPPTPAGRPCLRAENEGAAQAPPRTLLQAIRVTYLCPRGSCGSK
Nucleotide Sequence ATGCCCCGGTCTCACAATCTCAAAGCCCAAAAAGCTGAAGGTTCGGAGCAAGGCGGCTGCGGGGGAGAAGCCGTCAGAACCCCTGCCGACCAGAACCCCCCGCCCGCACCCCCCACCCCCGCAGGGAGACCGTGCCTGCGGGCTGAGAATGAAGGGGCGGCGCAGGCACCCCCACGCACCCTACTGCAGGCGATACGGGTCACCTACCTCTGTCCTCGCGGTTCTTGTGGAAGCAAATGA
CircID chr19:2272781|2273052
ORF Type ORF4
Protein Length 87
Nucleotide Length 261
Protein Sequence MGTRGCPGLTISKPKKLKVRSKAAAGEKPSEPLPTRTPRPHPPPPQGDRACGLRMKGRRRHPHAPYCRRYGSPTSVLAVLVEANEDM
Nucleotide Sequence TTGGGGACAAGGGGATGCCCCGGTCTCACAATCTCAAAGCCCAAAAAGCTGAAGGTTCGGAGCAAGGCGGCTGCGGGGGAGAAGCCGTCAGAACCCCTGCCGACCAGAACCCCCCGCCCGCACCCCCCACCCCCGCAGGGAGACCGTGCCTGCGGGCTGAGAATGAAGGGGCGGCGCAGGCACCCCCACGCACCCTACTGCAGGCGATACGGGTCACCTACCTCTGTCCTCGCGGTTCTTGTGGAAGCAAATGAAGACATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab