CircNet

General Information

circRNA Basic Information

CircID	chr19:23255817\|23255980
Strand	-
CircType	exon
Host Gene	ENSG00000269837.1;
Algorism	CIRI2;
Sequence	CTGTGTGAGTGGTGCAAAGACAATGTCCTCTGGTGCCAGGACCCAGGCATAAAAGTTACATCACCTGGATGTTGGACCCAGCAATATGTCACAATGGCCCAAGTAGGCAGAGACAGAAGAGTCAGATAATGTCAGTGCAGGGCCCAGCAATGTCACAAAGTCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:23255817\|23255980	hsa-miR-137-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-137-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-377-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-377-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-345-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-345-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-511-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-511-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-507	0	0	1
chr19:23255817\|23255980	hsa-miR-557	0	0	1
chr19:23255817\|23255980	hsa-miR-593-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-593-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-635	0	1	1
chr19:23255817\|23255980	hsa-miR-661	1	1	1
chr19:23255817\|23255980	hsa-miR-758-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-758-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-890	0	0	1
chr19:23255817\|23255980	hsa-miR-1291	0	1	1
chr19:23255817\|23255980	hsa-miR-1279	0	0	1
chr19:23255817\|23255980	hsa-miR-125a-3p	0	1	1
chr19:23255817\|23255980	hsa-miR-296-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-767-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-532-5p	0	0	1
chr19:23255817\|23255980	hsa-miR-342-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-491-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-542-3p	0	0	1
chr19:23255817\|23255980	hsa-miR-1254	0	0	1
chr19:23255817\|23255980	hsa-miR-2113	0	1	0
chr19:23255817\|23255980	hsa-miR-4259	1	0	0
chr19:23255817\|23255980	hsa-miR-8073	1	1	0
chr19:23255817\|23255980	hsa-miR-4793-3p	1	1	0
chr19:23255817\|23255980	hsa-miR-4633-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-1343-3p	1	0	0
chr19:23255817\|23255980	hsa-miR-6847-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-4743-3p	0	1	0
chr19:23255817\|23255980	hsa-miR-3616-3p	1	0	0
chr19:23255817\|23255980	hsa-miR-6719-3p	0	1	0
chr19:23255817\|23255980	hsa-miR-24-1-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-208a-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-5004-5p	1	0	0
chr19:23255817\|23255980	hsa-miR-3126-3p	1	0	0
chr19:23255817\|23255980	hsa-miR-3173-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-506-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-6836-5p	1	0	0
chr19:23255817\|23255980	hsa-miR-6799-3p	0	1	0
chr19:23255817\|23255980	hsa-miR-6724-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-6807-3p	1	0	0
chr19:23255817\|23255980	hsa-miR-5588-5p	0	1	0
chr19:23255817\|23255980	hsa-miR-1912-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:23255817\|23255980
ORF Type	ORF1
Protein Length	42
Nucleotide Length	129
Protein Sequence	LCEWCKDNVLWCQDPGIKVTSPGCWTQQYVTMAQVGRDRRVR
Nucleotide Sequence	CTGTGTGAGTGGTGCAAAGACAATGTCCTCTGGTGCCAGGACCCAGGCATAAAAGTTACATCACCTGGATGTTGGACCCAGCAATATGTCACAATGGCCCAAGTAGGCAGAGACAGAAGAGTCAGATAA

CircID	chr19:23255817\|23255980
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MVPGPRHKSYITWMLDPAICHNGPSRQRQKSQIMSVQGPAMSQSL
Nucleotide Sequence	CTGGTGCCAGGACCCAGGCATAAAAGTTACATCACCTGGATGTTGGACCCAGCAATATGTCACAATGGCCCAAGTAGGCAGAGACAGAAGAGTCAGATAATGTCAGTGCAGGGCCCAGCAATGTCACAAAGTCTC

CircID	chr19:23255817\|23255980
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MTLLSLPTWAIVTYCWVQHPGDVTFMPGSWHQRTLSLHHSH
Nucleotide Sequence	CTGACTCTTCTGTCTCTGCCTACTTGGGCCATTGTGACATATTGCTGGGTCCAACATCCAGGTGATGTAACTTTTATGCCTGGGTCCTGGCACCAGAGGACATTGTCTTTGCACCACTCACAC

CircID	chr19:23255817\|23255980
ORF Type	ORF4
Protein Length	29
Nucleotide Length	90
Protein Sequence	MLGPALTLSDSSVSAYLGHCDILLGPTSR
Nucleotide Sequence	TTGCTGGGCCCTGCACTGACATTATCTGACTCTTCTGTCTCTGCCTACTTGGGCCATTGTGACATATTGCTGGGTCCAACATCCAGGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information