CircRNA Information

General Information
circRNA Basic Information
CircID chr19:2444415|2456690
Strand -
CircType exon
Host Gene ENSG00000176619.9;
Algorism CIRI2;
Sequence CTCGTCCAACTCTGCCCTCAGCTTCCCAATCTCTATCTGCAGCCGGGCACGCTCTCGAGCCGTCTCATCCAGGACTCTCCGGGCATCGGCCAGCTCCGACTCGTACAGCGCCTTGATGCCACTCACCTCGCGCGTGGTCACCTCCTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:2444415|2456690 hsa-miR-571 0 0 1
chr19:2444415|2456690 hsa-miR-1255a 0 0 1
chr19:2444415|2456690 hsa-miR-139-3p 0 0 1
chr19:2444415|2456690 hsa-miR-524-3p 0 0 1
chr19:2444415|2456690 hsa-miR-525-3p 0 0 1
chr19:2444415|2456690 hsa-miR-1255b 0 0 1
chr19:2444415|2456690 hsa-miR-920 1 0 0
chr19:2444415|2456690 hsa-miR-3147 1 0 0
chr19:2444415|2456690 hsa-miR-3197 1 0 0
chr19:2444415|2456690 hsa-miR-3652 1 0 0
chr19:2444415|2456690 hsa-miR-4467 1 0 0
chr19:2444415|2456690 hsa-miR-4487 0 1 0
chr19:2444415|2456690 hsa-miR-4656 1 0 0
chr19:2444415|2456690 hsa-miR-4669 1 0 0
chr19:2444415|2456690 hsa-miR-4706 1 0 0
chr19:2444415|2456690 hsa-miR-4710 1 0 0
chr19:2444415|2456690 hsa-miR-5192 0 1 0
chr19:2444415|2456690 hsa-miR-5739 1 0 0
chr19:2444415|2456690 hsa-miR-5787 1 0 0
chr19:2444415|2456690 hsa-miR-6086 1 1 0
chr19:2444415|2456690 hsa-miR-8075 1 0 0
chr19:2444415|2456690 hsa-miR-135a-3p 1 1 0
chr19:2444415|2456690 hsa-miR-4731-5p 1 0 0
chr19:2444415|2456690 hsa-miR-1287-5p 0 1 0
chr19:2444415|2456690 hsa-miR-6765-5p 1 0 0
chr19:2444415|2456690 hsa-miR-671-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6825-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6894-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4687-3p 1 0 0
chr19:2444415|2456690 hsa-miR-6799-5p 1 0 0
chr19:2444415|2456690 hsa-miR-3192-5p 1 0 0
chr19:2444415|2456690 hsa-miR-7160-5p 0 1 0
chr19:2444415|2456690 hsa-miR-6820-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6727-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6776-5p 1 0 0
chr19:2444415|2456690 hsa-miR-7108-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6716-5p 1 0 0
chr19:2444415|2456690 hsa-miR-3180-3p 1 0 0
chr19:2444415|2456690 hsa-miR-6772-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6732-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6805-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6821-5p 1 0 0
chr19:2444415|2456690 hsa-miR-1226-5p 0 1 0
chr19:2444415|2456690 hsa-miR-7854-3p 1 1 0
chr19:2444415|2456690 hsa-miR-4787-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6824-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6800-5p 1 0 0
chr19:2444415|2456690 hsa-miR-3158-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6886-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4638-5p 1 0 0
chr19:2444415|2456690 hsa-miR-509-3p 1 0 0
chr19:2444415|2456690 hsa-miR-2277-5p 1 1 0
chr19:2444415|2456690 hsa-miR-5007-5p 0 1 0
chr19:2444415|2456690 hsa-miR-10400-5p 1 0 0
chr19:2444415|2456690 hsa-miR-1233-5p 1 0 0
chr19:2444415|2456690 hsa-miR-1273h-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6769b-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6778-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6812-5p 1 0 0
chr19:2444415|2456690 hsa-miR-1343-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6726-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6752-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6803-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6842-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6851-5p 1 1 0
chr19:2444415|2456690 hsa-miR-7110-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6751-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6763-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6779-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6879-5p 0 1 0
chr19:2444415|2456690 hsa-miR-5196-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4632-5p 0 1 0
chr19:2444415|2456690 hsa-miR-6735-5p 0 1 0
chr19:2444415|2456690 hsa-miR-675-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6883-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6889-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4723-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6831-5p 1 1 0
chr19:2444415|2456690 hsa-miR-939-5p 1 1 0
chr19:2444415|2456690 hsa-miR-4758-5p 1 0 0
chr19:2444415|2456690 hsa-miR-10394-3p 1 0 0
chr19:2444415|2456690 hsa-miR-6511b-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4664-5p 1 0 0
chr19:2444415|2456690 hsa-miR-7843-5p 0 1 0
chr19:2444415|2456690 hsa-miR-6736-5p 1 0 0
chr19:2444415|2456690 hsa-miR-10398-3p 0 1 0
chr19:2444415|2456690 hsa-miR-4646-5p 1 0 0
chr19:2444415|2456690 hsa-miR-4667-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6529-5p 1 0 0
chr19:2444415|2456690 hsa-miR-6884-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr19:2444415|2456690
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MQPGTLSSRLIQDSPGIGQLRLVQRLDATHLARGHLL
Nucleotide Sequence CTGCAGCCGGGCACGCTCTCGAGCCGTCTCATCCAGGACTCTCCGGGCATCGGCCAGCTCCGACTCGTACAGCGCCTTGATGCCACTCACCTCGCGCGTGGTCACCTCCTC
CircID chr19:2444415|2456690
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MPSASQSLSAAGHALEPSHPGLSGHRPAPTRTAP
Nucleotide Sequence CTGCCCTCAGCTTCCCAATCTCTATCTGCAGCCGGGCACGCTCTCGAGCCGTCTCATCCAGGACTCTCCGGGCATCGGCCAGCTCCGACTCGTACAGCGCCTTGA
CircID chr19:2444415|2456690
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MYESELADARRVLDETARERARLQIEIGKLRAELDE
Nucleotide Sequence CTGTACGAGTCGGAGCTGGCCGATGCCCGGAGAGTCCTGGATGAGACGGCTCGAGAGCGTGCCCGGCTGCAGATAGAGATTGGGAAGCTGAGGGCAGAGTTGGACGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab