CircRNA Information

General Information
circRNA Basic Information
CircID chr19:2809993|2810146
Strand +
CircType exon
Host Gene ENSG00000172009.13;
Algorism CIRI2;
Sequence CCGGAGGCCCCTGGGCTGCTGCTGGCTGCCGGTGGCAGCAGGACACACCTGAAGATGCCGGCCACATGACCCCGTCCCTGGAGGCCACCCACGCTTCTCCTCTAGCCACAGAGCTGCTGCTCCCTGAAAGCTCCGCACCCCGAGGGGTTGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:2809993|2810146 hsa-miR-15a-5p 0 0 1
chr19:2809993|2810146 hsa-miR-15a-3p 0 0 1
chr19:2809993|2810146 hsa-miR-15b-5p 0 0 1
chr19:2809993|2810146 hsa-miR-15b-3p 0 0 1
chr19:2809993|2810146 hsa-miR-195-5p 0 0 1
chr19:2809993|2810146 hsa-miR-195-3p 0 0 1
chr19:2809993|2810146 hsa-miR-370-5p 0 0 1
chr19:2809993|2810146 hsa-miR-370-3p 0 0 1
chr19:2809993|2810146 hsa-miR-424-5p 0 0 1
chr19:2809993|2810146 hsa-miR-424-3p 0 0 1
chr19:2809993|2810146 hsa-miR-497-5p 0 0 1
chr19:2809993|2810146 hsa-miR-497-3p 0 0 1
chr19:2809993|2810146 hsa-miR-646 0 0 1
chr19:2809993|2810146 hsa-miR-658 1 0 1
chr19:2809993|2810146 hsa-miR-675-5p 0 0 1
chr19:2809993|2810146 hsa-miR-675-3p 0 0 1
chr19:2809993|2810146 hsa-miR-877-5p 0 0 1
chr19:2809993|2810146 hsa-miR-877-3p 0 0 1
chr19:2809993|2810146 hsa-miR-663b 0 0 1
chr19:2809993|2810146 hsa-miR-1293 0 0 1
chr19:2809993|2810146 hsa-miR-125a-3p 0 0 1
chr19:2809993|2810146 hsa-miR-342-5p 0 0 1
chr19:2809993|2810146 hsa-miR-16 0 0 1
chr19:2809993|2810146 hsa-miR-608 1 0 0
chr19:2809993|2810146 hsa-miR-650 1 0 0
chr19:2809993|2810146 hsa-miR-663a 1 0 0
chr19:2809993|2810146 hsa-miR-762 1 0 0
chr19:2809993|2810146 hsa-miR-765 1 0 0
chr19:2809993|2810146 hsa-miR-298 1 0 0
chr19:2809993|2810146 hsa-miR-760 1 0 0
chr19:2809993|2810146 hsa-miR-3132 1 0 0
chr19:2809993|2810146 hsa-miR-4270 1 0 0
chr19:2809993|2810146 hsa-miR-3652 1 0 0
chr19:2809993|2810146 hsa-miR-3911 1 0 0
chr19:2809993|2810146 hsa-miR-3916 1 0 0
chr19:2809993|2810146 hsa-miR-3937 1 0 0
chr19:2809993|2810146 hsa-miR-4430 1 0 0
chr19:2809993|2810146 hsa-miR-4440 1 0 0
chr19:2809993|2810146 hsa-miR-3135b 1 0 0
chr19:2809993|2810146 hsa-miR-4466 1 0 0
chr19:2809993|2810146 hsa-miR-4498 1 0 0
chr19:2809993|2810146 hsa-miR-4516 1 1 0
chr19:2809993|2810146 hsa-miR-4651 1 0 0
chr19:2809993|2810146 hsa-miR-4660 1 1 0
chr19:2809993|2810146 hsa-miR-4688 1 0 0
chr19:2809993|2810146 hsa-miR-4689 1 0 0
chr19:2809993|2810146 hsa-miR-4739 1 0 0
chr19:2809993|2810146 hsa-miR-4741 1 0 0
chr19:2809993|2810146 hsa-miR-4754 1 0 0
chr19:2809993|2810146 hsa-miR-4784 1 1 0
chr19:2809993|2810146 hsa-miR-5090 1 0 0
chr19:2809993|2810146 hsa-miR-6077 1 0 0
chr19:2809993|2810146 hsa-miR-6090 1 0 0
chr19:2809993|2810146 hsa-miR-7704 1 0 0
chr19:2809993|2810146 hsa-miR-12115 1 0 0
chr19:2809993|2810146 hsa-miR-12118 1 0 0
chr19:2809993|2810146 hsa-miR-12128 1 1 0
chr19:2809993|2810146 hsa-miR-211-3p 1 0 0
chr19:2809993|2810146 hsa-miR-4433b-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6734-5p 1 0 0
chr19:2809993|2810146 hsa-miR-7155-5p 1 0 0
chr19:2809993|2810146 hsa-miR-3194-3p 1 0 0
chr19:2809993|2810146 hsa-miR-4665-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6747-5p 1 0 0
chr19:2809993|2810146 hsa-miR-7114-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6089 1 0 0
chr19:2809993|2810146 hsa-miR-6757-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6746-5p 1 0 0
chr19:2809993|2810146 hsa-miR-7154-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6820-5p 0 1 0
chr19:2809993|2810146 hsa-miR-6727-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4474-3p 1 1 0
chr19:2809993|2810146 hsa-miR-6842-3p 1 0 0
chr19:2809993|2810146 hsa-miR-4655-5p 1 0 0
chr19:2809993|2810146 hsa-miR-197-5p 1 0 0
chr19:2809993|2810146 hsa-miR-7108-5p 1 1 0
chr19:2809993|2810146 hsa-miR-3180-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6748-5p 0 1 0
chr19:2809993|2810146 hsa-miR-6772-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6793-5p 1 0 0
chr19:2809993|2810146 hsa-miR-185-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6805-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6798-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6782-5p 1 1 0
chr19:2809993|2810146 hsa-miR-6858-3p 0 1 0
chr19:2809993|2810146 hsa-miR-615-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6853-5p 0 1 0
chr19:2809993|2810146 hsa-miR-4715-3p 0 1 0
chr19:2809993|2810146 hsa-miR-1228-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4743-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4787-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6824-5p 1 0 0
chr19:2809993|2810146 hsa-miR-3162-5p 1 0 0
chr19:2809993|2810146 hsa-miR-3191-3p 1 0 0
chr19:2809993|2810146 hsa-miR-7846-3p 1 0 0
chr19:2809993|2810146 hsa-miR-744-5p 1 0 0
chr19:2809993|2810146 hsa-miR-7113-5p 0 1 0
chr19:2809993|2810146 hsa-miR-1199-3p 1 0 0
chr19:2809993|2810146 hsa-miR-1233-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6778-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6787-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6812-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6816-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6775-5p 1 0 0
chr19:2809993|2810146 hsa-miR-1343-5p 1 0 0
chr19:2809993|2810146 hsa-miR-3180 1 0 0
chr19:2809993|2810146 hsa-miR-5001-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6726-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6743-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6752-5p 0 1 0
chr19:2809993|2810146 hsa-miR-6754-5p 1 1 0
chr19:2809993|2810146 hsa-miR-6756-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6803-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6813-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6819-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6842-5p 1 0 0
chr19:2809993|2810146 hsa-miR-10401-5p 1 0 0
chr19:2809993|2810146 hsa-miR-5196-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6780b-5p 1 0 0
chr19:2809993|2810146 hsa-miR-10396b-5p 1 0 0
chr19:2809993|2810146 hsa-miR-1237-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4632-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4649-5p 1 0 0
chr19:2809993|2810146 hsa-miR-4725-3p 1 0 0
chr19:2809993|2810146 hsa-miR-4749-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6777-5p 1 0 0
chr19:2809993|2810146 hsa-miR-939-5p 1 1 0
chr19:2809993|2810146 hsa-miR-365a-5p 1 0 0
chr19:2809993|2810146 hsa-miR-365b-5p 1 0 0
chr19:2809993|2810146 hsa-miR-1914-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6750-5p 1 0 0
chr19:2809993|2810146 hsa-miR-5591-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6762-5p 1 0 0
chr19:2809993|2810146 hsa-miR-518e-5p 1 0 0
chr19:2809993|2810146 hsa-miR-519a-5p 1 0 0
chr19:2809993|2810146 hsa-miR-519b-5p 1 0 0
chr19:2809993|2810146 hsa-miR-519c-5p 1 0 0
chr19:2809993|2810146 hsa-miR-522-5p 1 0 0
chr19:2809993|2810146 hsa-miR-523-5p 1 0 0
chr19:2809993|2810146 hsa-miR-6893-3p 0 1 0
chr19:2809993|2810146 hsa-miR-4757-5p 1 0 0
chr19:2809993|2810146 hsa-miR-10400-3p 1 0 0
chr19:2809993|2810146 hsa-miR-6817-5p 0 1 0
chr19:2809993|2810146 hsa-miR-4690-3p 0 1 0
chr19:2809993|2810146 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:2809993|2810146
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MTPSLEATHASPLATELLLPESSAPRGVG
Nucleotide Sequence ATGACCCCGTCCCTGGAGGCCACCCACGCTTCTCCTCTAGCCACAGAGCTGCTGCTCCCTGAAAGCTCCGCACCCCGAGGGGTTGGG
CircID chr19:2809993|2810146
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MWLEEKRGWPPGTGSCGRHLQVCPAATGSQQQPRGLR
Nucleotide Sequence CTGTGGCTAGAGGAGAAGCGTGGGTGGCCTCCAGGGACGGGGTCATGTGGCCGGCATCTTCAGGTGTGTCCTGCTGCCACCGGCAGCCAGCAGCAGCCCAGGGGCCTCCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab