CircRNA Information

General Information
circRNA Basic Information
CircID chr19:3053289|3053444
Strand +
CircType exon
Host Gene ENSG00000104964.13;
Algorism CIRI2;
Sequence AGCCCTCTCACCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGCACCCCGAGTCTCCCCCGACCCCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCACGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:3053289|3053444 hsa-miR-517-5p 0 0 1
chr19:3053289|3053444 hsa-miR-517b-3p 0 0 1
chr19:3053289|3053444 hsa-miR-585-5p 0 0 1
chr19:3053289|3053444 hsa-miR-585-3p 0 0 1
chr19:3053289|3053444 hsa-miR-619-5p 0 0 1
chr19:3053289|3053444 hsa-miR-619-3p 0 0 1
chr19:3053289|3053444 hsa-miR-621 0 0 1
chr19:3053289|3053444 hsa-miR-920 0 0 1
chr19:3053289|3053444 hsa-miR-1179 0 0 1
chr19:3053289|3053444 hsa-miR-1231 0 0 1
chr19:3053289|3053444 hsa-miR-1299 1 1 1
chr19:3053289|3053444 hsa-miR-486-3p 1 1 1
chr19:3053289|3053444 hsa-miR-875-3p 1 0 1
chr19:3053289|3053444 hsa-miR-342-5p 0 0 1
chr19:3053289|3053444 hsa-miR-886-5p 0 0 1
chr19:3053289|3053444 hsa-miR-1268 0 0 1
chr19:3053289|3053444 hsa-miR-608 1 1 0
chr19:3053289|3053444 hsa-miR-663a 1 0 0
chr19:3053289|3053444 hsa-miR-658 1 0 0
chr19:3053289|3053444 hsa-miR-936 1 0 0
chr19:3053289|3053444 hsa-miR-1293 1 0 0
chr19:3053289|3053444 hsa-miR-1268a 1 1 0
chr19:3053289|3053444 hsa-miR-2861 1 0 0
chr19:3053289|3053444 hsa-miR-3141 1 0 0
chr19:3053289|3053444 hsa-miR-3147 1 0 0
chr19:3053289|3053444 hsa-miR-3153 0 1 0
chr19:3053289|3053444 hsa-miR-3154 1 0 0
chr19:3053289|3053444 hsa-miR-3196 1 0 0
chr19:3053289|3053444 hsa-miR-378c 1 0 0
chr19:3053289|3053444 hsa-miR-4298 1 0 0
chr19:3053289|3053444 hsa-miR-4257 1 1 0
chr19:3053289|3053444 hsa-miR-4260 1 0 0
chr19:3053289|3053444 hsa-miR-4281 1 0 0
chr19:3053289|3053444 hsa-miR-3661 0 1 0
chr19:3053289|3053444 hsa-miR-3665 1 1 0
chr19:3053289|3053444 hsa-miR-3911 1 0 0
chr19:3053289|3053444 hsa-miR-3917 1 0 0
chr19:3053289|3053444 hsa-miR-3936 1 0 0
chr19:3053289|3053444 hsa-miR-1268b 1 1 0
chr19:3053289|3053444 hsa-miR-4455 1 0 0
chr19:3053289|3053444 hsa-miR-4458 1 0 0
chr19:3053289|3053444 hsa-miR-3135b 1 0 0
chr19:3053289|3053444 hsa-miR-4466 1 0 0
chr19:3053289|3053444 hsa-miR-4471 0 1 0
chr19:3053289|3053444 hsa-miR-4481 1 1 0
chr19:3053289|3053444 hsa-miR-4488 1 0 0
chr19:3053289|3053444 hsa-miR-4507 1 0 0
chr19:3053289|3053444 hsa-miR-4519 1 0 0
chr19:3053289|3053444 hsa-miR-4648 1 0 0
chr19:3053289|3053444 hsa-miR-4651 1 0 0
chr19:3053289|3053444 hsa-miR-4658 1 0 0
chr19:3053289|3053444 hsa-miR-4669 1 0 0
chr19:3053289|3053444 hsa-miR-4681 0 1 0
chr19:3053289|3053444 hsa-miR-4688 1 1 0
chr19:3053289|3053444 hsa-miR-4706 1 0 0
chr19:3053289|3053444 hsa-miR-4710 1 0 0
chr19:3053289|3053444 hsa-miR-4736 1 0 0
chr19:3053289|3053444 hsa-miR-4741 1 0 0
chr19:3053289|3053444 hsa-miR-5090 1 0 0
chr19:3053289|3053444 hsa-miR-5192 1 0 0
chr19:3053289|3053444 hsa-miR-5572 1 0 0
chr19:3053289|3053444 hsa-miR-5787 1 0 0
chr19:3053289|3053444 hsa-miR-6090 1 0 0
chr19:3053289|3053444 hsa-miR-6134 1 1 0
chr19:3053289|3053444 hsa-miR-6165 1 0 0
chr19:3053289|3053444 hsa-miR-6863 1 0 0
chr19:3053289|3053444 hsa-miR-7704 1 1 0
chr19:3053289|3053444 hsa-miR-8072 1 0 0
chr19:3053289|3053444 hsa-miR-8073 1 0 0
chr19:3053289|3053444 hsa-miR-8077 1 0 0
chr19:3053289|3053444 hsa-miR-8089 1 0 0
chr19:3053289|3053444 hsa-miR-1843 1 0 0
chr19:3053289|3053444 hsa-miR-12114 1 1 0
chr19:3053289|3053444 hsa-miR-12115 1 0 0
chr19:3053289|3053444 hsa-miR-12127 1 0 0
chr19:3053289|3053444 hsa-miR-134-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4433b-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6840-3p 0 1 0
chr19:3053289|3053444 hsa-miR-323a-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6747-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4433a-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6765-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7106-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6825-5p 1 0 0
chr19:3053289|3053444 hsa-miR-125a-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6799-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6510-5p 1 0 0
chr19:3053289|3053444 hsa-miR-8071 1 0 0
chr19:3053289|3053444 hsa-miR-6804-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7851-3p 0 1 0
chr19:3053289|3053444 hsa-miR-3934-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1227-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7114-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6515-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6880-5p 1 1 0
chr19:3053289|3053444 hsa-miR-7847-3p 1 1 0
chr19:3053289|3053444 hsa-miR-6746-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7160-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6890-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6727-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6759-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6721-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4655-5p 0 1 0
chr19:3053289|3053444 hsa-miR-770-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6742-5p 1 0 0
chr19:3053289|3053444 hsa-miR-3151-5p 1 1 0
chr19:3053289|3053444 hsa-miR-3180-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6748-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6772-5p 1 0 0
chr19:3053289|3053444 hsa-miR-185-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6732-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6805-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6798-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6881-5p 1 0 0
chr19:3053289|3053444 hsa-miR-2467-3p 1 1 0
chr19:3053289|3053444 hsa-miR-6782-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6874-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7855-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6786-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6835-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1226-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1229-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4640-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6753-5p 0 1 0
chr19:3053289|3053444 hsa-miR-885-3p 1 0 0
chr19:3053289|3053444 hsa-miR-1908-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1228-5p 1 0 0
chr19:3053289|3053444 hsa-miR-296-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6823-5p 1 0 0
chr19:3053289|3053444 hsa-miR-92b-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6516-5p 1 1 0
chr19:3053289|3053444 hsa-miR-877-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6847-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7854-3p 1 0 0
chr19:3053289|3053444 hsa-miR-4787-5p 1 0 0
chr19:3053289|3053444 hsa-miR-149-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6824-5p 1 0 0
chr19:3053289|3053444 hsa-miR-194-3p 1 0 0
chr19:3053289|3053444 hsa-miR-7112-5p 1 0 0
chr19:3053289|3053444 hsa-miR-423-5p 1 0 0
chr19:3053289|3053444 hsa-miR-7846-3p 1 0 0
chr19:3053289|3053444 hsa-miR-4750-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1296-3p 1 0 0
chr19:3053289|3053444 hsa-miR-1207-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1233-5p 0 1 0
chr19:3053289|3053444 hsa-miR-4763-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6769b-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6778-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6787-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6812-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6816-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6865-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6870-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6893-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6775-5p 1 1 0
chr19:3053289|3053444 hsa-miR-1343-5p 1 0 0
chr19:3053289|3053444 hsa-miR-3180 1 0 0
chr19:3053289|3053444 hsa-miR-6737-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6743-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6752-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6756-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6769a-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6803-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6819-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6842-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6851-5p 1 1 0
chr19:3053289|3053444 hsa-miR-7110-5p 1 0 0
chr19:3053289|3053444 hsa-miR-10401-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6722-3p 1 1 0
chr19:3053289|3053444 hsa-miR-6751-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6763-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6779-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6780a-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6797-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6808-5p 0 1 0
chr19:3053289|3053444 hsa-miR-6879-5p 1 1 0
chr19:3053289|3053444 hsa-miR-7111-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4728-5p 1 0 0
chr19:3053289|3053444 hsa-miR-5196-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6780b-5p 1 0 0
chr19:3053289|3053444 hsa-miR-10396b-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1237-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1909-3p 1 0 0
chr19:3053289|3053444 hsa-miR-328-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4632-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4649-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4685-5p 1 1 0
chr19:3053289|3053444 hsa-miR-4725-3p 1 0 0
chr19:3053289|3053444 hsa-miR-4745-5p 1 1 0
chr19:3053289|3053444 hsa-miR-6729-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6738-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6794-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6858-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4436b-3p 1 0 0
chr19:3053289|3053444 hsa-miR-1238-5p 1 0 0
chr19:3053289|3053444 hsa-miR-4758-5p 1 1 0
chr19:3053289|3053444 hsa-miR-4633-3p 1 0 0
chr19:3053289|3053444 hsa-miR-3940-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6731-5p 1 0 0
chr19:3053289|3053444 hsa-miR-1271-3p 1 0 0
chr19:3053289|3053444 hsa-miR-4664-5p 0 1 0
chr19:3053289|3053444 hsa-miR-1914-3p 1 0 0
chr19:3053289|3053444 hsa-miR-6736-5p 1 0 0
chr19:3053289|3053444 hsa-miR-3116 1 0 0
chr19:3053289|3053444 hsa-miR-6766-5p 1 1 0
chr19:3053289|3053444 hsa-miR-3689d 0 1 0
chr19:3053289|3053444 hsa-miR-6790-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6724-5p 1 0 0
chr19:3053289|3053444 hsa-miR-6791-5p 1 0 0
chr19:3053289|3053444 hsa-miR-769-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:3053289|3053444
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MVLHARNASCPFPVLGTPSLPRPRVPGMLPPPPAPLTTSASSRHLHAH
Nucleotide Sequence CTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGCACCCCGAGTCTCCCCCGACCCCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCACGCCCAC
CircID chr19:3053289|3053444
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MHAMLAAPFPSWAPRVSPDPGSQVCSHLHLPHSPPLLVPDTSTP
Nucleotide Sequence ATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGCACCCCGAGTCTCCCCCGACCCCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCACGCCC
CircID chr19:3053289|3053444
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MPLSRPGHPESPPTPGPRYAPTSTCPTHHLC
Nucleotide Sequence CTGCCCCTTTCCCGTCCTGGGCACCCCGAGTCTCCCCCGACCCCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAG
CircID chr19:3053289|3053444
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MELAEVVSGAGGGGSIPGTRGRGRLGVPRTGKGQLALRACSTRVRG
Nucleotide Sequence CTGGAACTAGCAGAGGTGGTGAGTGGGGCAGGTGGAGGTGGGAGCATACCTGGGACCCGGGGTCGGGGGAGACTCGGGGTGCCCAGGACGGGAAAGGGGCAGCTAGCATTGCGTGCATGCAGTACCAGGGTGAGAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab