CircRNA Information

General Information
circRNA Basic Information
CircID chr19:3056504|3056710
Strand +
CircType exon
Host Gene ENSG00000104964.13;
Algorism CIRI2;
Sequence CCGCAGACAAGACATAGAAAGATACAAGATTAGGAGCCCTGGAATGCGTGTTCTCGCGGTGCACATGGAGTGGGGGAGGAGCCAGGCCAGGGCTAGGGACCTAAAGTGCCCCCAGTCTCCATCCGCAGCCCCAGCGGCCCCCTGCCCCTCTCCAGGGCGGGCTGGGATGCTGGGTGTGGGCGTCTCTCCCTCCTCTTTCCCTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:3056504|3056710 hsa-miR-149-5p 0 0 1
chr19:3056504|3056710 hsa-miR-149-3p 0 0 1
chr19:3056504|3056710 hsa-miR-185-5p 0 0 1
chr19:3056504|3056710 hsa-miR-185-3p 0 0 1
chr19:3056504|3056710 hsa-miR-346 0 0 1
chr19:3056504|3056710 hsa-miR-431-5p 0 0 1
chr19:3056504|3056710 hsa-miR-431-3p 0 0 1
chr19:3056504|3056710 hsa-miR-583 0 0 1
chr19:3056504|3056710 hsa-miR-604 0 1 1
chr19:3056504|3056710 hsa-miR-632 0 0 1
chr19:3056504|3056710 hsa-miR-637 0 1 1
chr19:3056504|3056710 hsa-miR-643 0 0 1
chr19:3056504|3056710 hsa-miR-1231 0 0 1
chr19:3056504|3056710 hsa-miR-139-3p 0 0 1
chr19:3056504|3056710 hsa-miR-486-3p 0 0 1
chr19:3056504|3056710 hsa-miR-324-5p 0 0 1
chr19:3056504|3056710 hsa-miR-423-5p 1 1 1
chr19:3056504|3056710 hsa-miR-361-3p 0 0 1
chr19:3056504|3056710 hsa-miR-654-3p 0 0 1
chr19:3056504|3056710 hsa-miR-338-3p 0 0 1
chr19:3056504|3056710 hsa-miR-1207-5p 1 1 1
chr19:3056504|3056710 hsa-miR-129-3p 0 0 1
chr19:3056504|3056710 hsa-miR-663a 0 1 0
chr19:3056504|3056710 hsa-miR-658 1 0 0
chr19:3056504|3056710 hsa-miR-765 1 0 0
chr19:3056504|3056710 hsa-miR-924 1 0 0
chr19:3056504|3056710 hsa-miR-3153 1 1 0
chr19:3056504|3056710 hsa-miR-3176 0 1 0
chr19:3056504|3056710 hsa-miR-4268 0 1 0
chr19:3056504|3056710 hsa-miR-4286 0 1 0
chr19:3056504|3056710 hsa-miR-4463 0 1 0
chr19:3056504|3056710 hsa-miR-4533 1 0 0
chr19:3056504|3056710 hsa-miR-4534 0 1 0
chr19:3056504|3056710 hsa-miR-4688 0 1 0
chr19:3056504|3056710 hsa-miR-4739 0 1 0
chr19:3056504|3056710 hsa-miR-4779 1 0 0
chr19:3056504|3056710 hsa-miR-5739 1 0 0
chr19:3056504|3056710 hsa-miR-5787 1 0 0
chr19:3056504|3056710 hsa-miR-6090 1 0 0
chr19:3056504|3056710 hsa-miR-6124 1 0 0
chr19:3056504|3056710 hsa-miR-6127 1 0 0
chr19:3056504|3056710 hsa-miR-6133 1 0 0
chr19:3056504|3056710 hsa-miR-7150 1 0 0
chr19:3056504|3056710 hsa-miR-8082 0 1 0
chr19:3056504|3056710 hsa-miR-8085 1 1 0
chr19:3056504|3056710 hsa-miR-8089 1 1 0
chr19:3056504|3056710 hsa-miR-6749-3p 0 1 0
chr19:3056504|3056710 hsa-miR-128-1-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6734-5p 1 0 0
chr19:3056504|3056710 hsa-miR-4731-5p 0 1 0
chr19:3056504|3056710 hsa-miR-7106-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6799-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6728-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6873-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6721-5p 0 1 0
chr19:3056504|3056710 hsa-miR-7845-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6716-5p 1 0 0
chr19:3056504|3056710 hsa-miR-3180-3p 1 0 0
chr19:3056504|3056710 hsa-miR-6829-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6805-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6798-5p 0 1 0
chr19:3056504|3056710 hsa-miR-3126-5p 1 0 0
chr19:3056504|3056710 hsa-miR-30b-3p 1 0 0
chr19:3056504|3056710 hsa-miR-6850-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6735-3p 1 0 0
chr19:3056504|3056710 hsa-miR-6815-3p 0 1 0
chr19:3056504|3056710 hsa-miR-7109-5p 1 0 0
chr19:3056504|3056710 hsa-miR-4707-3p 0 1 0
chr19:3056504|3056710 hsa-miR-30c-2-3p 1 0 0
chr19:3056504|3056710 hsa-miR-1908-5p 1 0 0
chr19:3056504|3056710 hsa-miR-1228-5p 1 0 0
chr19:3056504|3056710 hsa-miR-3202 1 0 0
chr19:3056504|3056710 hsa-miR-6895-3p 1 0 0
chr19:3056504|3056710 hsa-miR-1296-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6779-3p 0 1 0
chr19:3056504|3056710 hsa-miR-1233-5p 0 1 0
chr19:3056504|3056710 hsa-miR-1273h-5p 1 0 0
chr19:3056504|3056710 hsa-miR-4763-3p 1 1 0
chr19:3056504|3056710 hsa-miR-6778-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6870-5p 1 0 0
chr19:3056504|3056710 hsa-miR-3180 1 0 0
chr19:3056504|3056710 hsa-miR-6737-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6743-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6756-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6803-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6819-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6842-5p 1 0 0
chr19:3056504|3056710 hsa-miR-7107-5p 1 0 0
chr19:3056504|3056710 hsa-miR-1249-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6722-3p 0 1 0
chr19:3056504|3056710 hsa-miR-6751-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6763-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6779-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6780a-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6788-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6797-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6875-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6879-5p 1 0 0
chr19:3056504|3056710 hsa-miR-1915-3p 1 0 0
chr19:3056504|3056710 hsa-miR-4728-5p 1 1 0
chr19:3056504|3056710 hsa-miR-5196-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6780b-5p 1 0 0
chr19:3056504|3056710 hsa-miR-1909-3p 0 1 0
chr19:3056504|3056710 hsa-miR-328-5p 1 1 0
chr19:3056504|3056710 hsa-miR-3689a-3p 1 0 0
chr19:3056504|3056710 hsa-miR-4685-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6738-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6794-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6795-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6848-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6883-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6887-5p 1 1 0
chr19:3056504|3056710 hsa-miR-6885-5p 1 0 0
chr19:3056504|3056710 hsa-miR-30c-1-3p 1 0 0
chr19:3056504|3056710 hsa-miR-6758-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6856-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6855-5p 0 1 0
chr19:3056504|3056710 hsa-miR-4747-5p 1 0 0
chr19:3056504|3056710 hsa-miR-4716-3p 1 0 0
chr19:3056504|3056710 hsa-miR-6750-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6766-5p 1 0 0
chr19:3056504|3056710 hsa-miR-6785-5p 1 1 0
chr19:3056504|3056710 hsa-miR-3184-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6791-5p 1 1 0
chr19:3056504|3056710 hsa-miR-4756-5p 0 1 0
chr19:3056504|3056710 hsa-miR-6783-3p 1 0 0
chr19:3056504|3056710 hsa-miR-4691-5p 0 1 0
chr19:3056504|3056710 hsa-miR-574-3p 0 1 0
chr19:3056504|3056710 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:3056504|3056710
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MRVLAVHMEWGRSQARARDLKCPQSPSAAPAAPCPSPGRAGMLGVGVSPSSFPP
Nucleotide Sequence ATGCGTGTTCTCGCGGTGCACATGGAGTGGGGGAGGAGCCAGGCCAGGGCTAGGGACCTAAAGTGCCCCCAGTCTCCATCCGCAGCCCCAGCGGCCCCCTGCCCCTCTCCAGGGCGGGCTGGGATGCTGGGTGTGGGCGTCTCTCCCTCCTCTTTCCCTCCC

CircID chr19:3056504|3056710
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MAWLLPHSMCTARTRIPGLLILYLSMSCLR
Nucleotide Sequence CTGGCCTGGCTCCTCCCCCACTCCATGTGCACCGCGAGAACACGCATTCCAGGGCTCCTAATCTTGTATCTTTCTATGTCTTGTCTGCGG

CircID chr19:3056504|3056710
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MAPPPLHVHRENTHSRAPNLVSFYVLSA
Nucleotide Sequence CTGGCTCCTCCCCCACTCCATGTGCACCGCGAGAACACGCATTCCAGGGCTCCTAATCTTGTATCTTTCTATGTCTTGTCTGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites