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General Information

circRNA Basic Information

CircID	chr19:32639356\|32643631
Strand	-
CircType	exon
Host Gene	ENSG00000105186.15;
Algorism	CIRI2;find_circ;DCC;
Sequence	GACTCAGCGAATGCTCTCTACACCAAATGCCTCCAGCAGCTTCTGAGGGACTCTCACCTGAAAATGCTCGCCAAGCAGGAGGCCCAGATGAACCTGATGAAGCAGGCAGTGGAGATATACGTCCATCATGAAATTTACAACCTGATCTTTAAATACGTGGGGACCATGGAGGCAAGTGAGGTAGGTTCTCAGTTATTATCACCCAAGATGGAAGCCTTCTTCTGTGCTTTTTGAGAAATTTGAAGGTTCGTTAAAATCTGTTGTTAGGATGCGGCCTTTAACAAAATCACAAGAAGCCTTCAAGATCTTCAGCAGAAAGATATTGGTGTGAAACCGGAGTTCAGGTAAGGGTTTGCGCCACAGCGGCTTGGTGTCCTCAGAGGCAGGGGTGCTGTCTTCTCCCGCTTTAACATACCTCGTGCCAAAAGAGAGCTGGCTCAGCTGAACAAATGCACCTCCCCACAGCAGAAGCTTGTCTGCTTGCGAAAAGTGGTGCAGCTCATTACACAGTCTCCAAGCCAGAGAGTGAACCTGGAGACCATGTGTGCTGATGATCTGCTATCAGTCCTGTTATACTTGCTTGTGAAAACGGAGATCCCTAATTGGATGGCAAATTTGAGTTACATCAAAAACTTCAGGTTTAGCAGCTTGGCAAAGGATGAACTGGGATACTGCCTGACCTCATTCGAAGCTGCCATTGAATATATTCGGCAAGGAAGCCTCTCTGCTAAACCCCCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:32639356\|32643631	hsa-miR-1203	1	1	1
chr19:32639356\|32643631	hsa-miR-4257	1	1	1
chr19:32639356\|32643631	hsa-miR-3909	1	1	1
chr19:32639356\|32643631	hsa-miR-5094	1	1	1
chr19:32639356\|32643631	hsa-miR-6165	1	1	1
chr19:32639356\|32643631	hsa-miR-8060	1	1	1
chr19:32639356\|32643631	hsa-miR-8075	1	1	1
chr19:32639356\|32643631	hsa-miR-105-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-22-3p	1	1	1
chr19:32639356\|32643631	hsa-miR-6734-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-6857-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-125a-3p	1	1	1
chr19:32639356\|32643631	hsa-miR-182-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-6089	1	1	1
chr19:32639356\|32643631	hsa-miR-7847-3p	1	1	1
chr19:32639356\|32643631	hsa-miR-4695-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-4459	1	1	1
chr19:32639356\|32643631	hsa-miR-24-3p	1	1	1
chr19:32639356\|32643631	hsa-miR-6742-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-491-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-3151-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-6765-3p	1	1	1
chr19:32639356\|32643631	hsa-miR-5008-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-1226-5p	1	1	1
chr19:32639356\|32643631	hsa-miR-619-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:32639356\|32643631
ORF Type	ORF1
Protein Length	66
Nucleotide Length	198
Protein Sequence	MCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRFSSLAKDELGYCLTSFEAAIEYIRQGSLSAKPP
Nucleotide Sequence	ATGTGTGCTGATGATCTGCTATCAGTCCTGTTATACTTGCTTGTGAAAACGGAGATCCCTAATTGGATGGCAAATTTGAGTTACATCAAAAACTTCAGGTTTAGCAGCTTGGCAAAGGATGAACTGGGATACTGCCTGACCTCATTCGAAGCTGCCATTGAATATATTCGGCAAGGAAGCCTCTCTGCTAAACCCCCT

CircID	chr19:32639356\|32643631
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	MLAKQEAQMNLMKQAVEIYVHHEIYNLIFKYVGTMEASEVGSQLLSPKMEAFFCAF*
Nucleotide Sequence	ATGCTCGCCAAGCAGGAGGCCCAGATGAACCTGATGAAGCAGGCAGTGGAGATATACGTCCATCATGAAATTTACAACCTGATCTTTAAATACGTGGGGACCATGGAGGCAAGTGAGGTAGGTTCTCAGTTATTATCACCCAAGATGGAAGCCTTCTTCTGTGCTTTTTGA

CircID	chr19:32639356\|32643631
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	MMDVYLHCLLHQVHLGLLLGEHFQVRVPQKLLEAFGVESIR*
Nucleotide Sequence	ATGATGGACGTATATCTCCACTGCCTGCTTCATCAGGTTCATCTGGGCCTCCTGCTTGGCGAGCATTTTCAGGTGAGAGTCCCTCAGAAGCTGCTGGAGGCATTTGGTGTAGAGAGCATTCGCTGA

CircID	chr19:32639356\|32643631
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MLKREKTAPLPLRTPSRCGANPYLNSGFTPISFC*
Nucleotide Sequence	ATGTTAAAGCGGGAGAAGACAGCACCCCTGCCTCTGAGGACACCAAGCCGCTGTGGCGCAAACCCTTACCTGAACTCCGGTTTCACACCAATATCTTTCTGCTGA

CircID	chr19:32639356\|32643631
ORF Type	ORF5
Protein Length	35
Nucleotide Length	105
Protein Sequence	MVSRFTLWLGDCVMSCTTFRKQTSFCCGEVHLFS*
Nucleotide Sequence	ATGGTCTCCAGGTTCACTCTCTGGCTTGGAGACTGTGTAATGAGCTGCACCACTTTTCGCAAGCAGACAAGCTTCTGCTGTGGGGAGGTGCATTTGTTCAGCTGA

CircID	chr19:32639356\|32643631
ORF Type	ORF6
Protein Length	35
Nucleotide Length	105
Protein Sequence	MPPAASEGLSPENARQAGGPDEPDEAGSGDIRPS*
Nucleotide Sequence	ATGCCTCCAGCAGCTTCTGAGGGACTCTCACCTGAAAATGCTCGCCAAGCAGGAGGCCCAGATGAACCTGATGAAGCAGGCAGTGGAGATATACGTCCATCATGA

CircID	chr19:32639356\|32643631
ORF Type	ORF7
Protein Length	34
Nucleotide Length	102
Protein Sequence	MHLPTAEACLLAKSGAAHYTVSKPESEPGDHVC*
Nucleotide Sequence	ATGCACCTCCCCACAGCAGAAGCTTGTCTGCTTGCGAAAAGTGGTGCAGCTCATTACACAGTCTCCAAGCCAGAGAGTGAACCTGGAGACCATGTGTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:32639356\|32643631	NOP56	1	0	0
chr19:32639356\|32643631	ELAVL1	2	1	4
chr19:32639356\|32643631	SF3B4	3	0	0
chr19:32639356\|32643631	FAM120A	0	0	1
chr19:32639356\|32643631	PUM2	0	2	1
chr19:32639356\|32643631	PRPF8	4	2	2
chr19:32639356\|32643631	UPF1	2	0	0
chr19:32639356\|32643631	TAF15	0	2	0
chr19:32639356\|32643631	FMR1	1	2	6
chr19:32639356\|32643631	CPSF6	1	4	0
chr19:32639356\|32643631	NUDT21	0	3	0
chr19:32639356\|32643631	TIA1	1	0	0
chr19:32639356\|32643631	CPSF3	0	1	0
chr19:32639356\|32643631	FUS	1	1	0
chr19:32639356\|32643631	DGCR8	1	0	0
chr19:32639356\|32643631	SRSF7	1	0	0
chr19:32639356\|32643631	SRSF1	2	0	1
chr19:32639356\|32643631	NOP58	3	0	6
chr19:32639356\|32643631	U2AF1	1	0	1
chr19:32639356\|32643631	U2AF2	13	4	6
chr19:32639356\|32643631	HNRNPU	0	2	0
chr19:32639356\|32643631	DDX54	2	2	12
chr19:32639356\|32643631	RBM10	7	0	0
chr19:32639356\|32643631	HNRNPUL1	0	1	0
chr19:32639356\|32643631	AUH	0	1	0
chr19:32639356\|32643631	FIP1L1	0	2	0
chr19:32639356\|32643631	PTBP1	2	1	1
chr19:32639356\|32643631	HNRNPC	0	1	0
chr19:32639356\|32643631	TRA2A	1	0	1
chr19:32639356\|32643631	ZNF184	1	0	0
chr19:32639356\|32643631	HNRNPA1	0	2	0
chr19:32639356\|32643631	DDX3X	0	4	0
chr19:32639356\|32643631	MSI2	0	0	1
chr19:32639356\|32643631	ACIN1	1	0	3
chr19:32639356\|32643631	LIN28B	1	2	7
chr19:32639356\|32643631	FXR1	2	1	5
chr19:32639356\|32643631	FXR2	0	2	3
chr19:32639356\|32643631	IGF2BP1	0	0	1
chr19:32639356\|32643631	IGF2BP3	1	0	0
chr19:32639356\|32643631	IGF2BP2	3	0	4
chr19:32639356\|32643631	NPM1	1	0	0
chr19:32639356\|32643631	FTO	1	0	0
chr19:32639356\|32643631	TARDBP	0	1	0
chr19:32639356\|32643631	BUD13	2	0	1
chr19:32639356\|32643631	RBFOX2	1	0	0
chr19:32639356\|32643631	EIF4G2	1	0	0
chr19:32639356\|32643631	CSTF2T	1	2	2
chr19:32639356\|32643631	BCCIP	1	0	0
chr19:32639356\|32643631	CSTF2	0	0	1
chr19:32639356\|32643631	CPSF7	0	2	0
chr19:32639356\|32643631	RBM22	0	3	0
chr19:32639356\|32643631	WDR33	0	0	1
chr19:32639356\|32643631	RTCB	0	1	0
chr19:32639356\|32643631	AGO2	0	0	1
chr19:32639356\|32643631	AGO1	0	0	1
chr19:32639356\|32643631	EWSR1	0	2	0
chr19:32639356\|32643631	EIF4A3	4	3	14
chr19:32639356\|32643631	FBL	4	1	6

CircRNA Information