CircNet

General Information

circRNA Basic Information

CircID	chr19:34450265\|34460566
Strand	+
CircType	exon
Host Gene	ENSG00000126261.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTTTTTAAAGATGACATCAGGTATCTGTTGACAATGGACAAACTATGGCGGAAAAGGAAACCTCCAGTTCCGTTGGACTGGGCTGAAGTACAAAGTCAAGATTTTTTTGAATAAACAACCAAACCCAAGAAAGAAGCTTCTTGTGCCTTGTGCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAGCAAGCCAGAGGTGACTGTGCGGCTGAATGTCCATAAAGTGACTGTTCTCACCTTACAAGACAAGATAGTGAAAGAAAAATTTGCTATGGTAGCACCAGATGTCCAAATTGAAGATGGGAAAGGAACAATCCTAATATCTTCCGAAGAGGGAGAGACGGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:34450265\|34460566	hsa-miR-5572	1	1	1
chr19:34450265\|34460566	hsa-miR-92a-1-5p	1	1	1
chr19:34450265\|34460566	hsa-miR-6799-5p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:34450265\|34460566
ORF Type	ORF1
Protein Length	70
Nucleotide Length	210
Protein Sequence	MDIQPHSHLWLAGTYITIGVGRIQCTRHKKLLSWVWLFIQKNLDFVLQPSPTELEVSFSAIVCPLSTDT*
Nucleotide Sequence	ATGGACATTCAGCCGCACAGTCACCTCTGGCTTGCTGGCACATACATAACAATTGGGGTTGGGAGGATCCAGTGCACAAGGCACAAGAAGCTTCTTTCTTGGGTTTGGTTGTTTATTCAAAAAAATCTTGACTTTGTACTTCAGCCCAGTCCAACGGAACTGGAGGTTTCCTTTTCCGCCATAGTTTGTCCATTGTCAACAGATACCTGA

CircID	chr19:34450265\|34460566
ORF Type	ORF2
Protein Length	82
Nucleotide Length	246
Protein Sequence	LNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILISSEEGETE
Nucleotide Sequence	TTGAATAAACAACCAAACCCAAGAAAGAAGCTTCTTGTGCCTTGTGCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAGCAAGCCAGAGGTGACTGTGCGGCTGAATGTCCATAAAGTGACTGTTCTCACCTTACAAGACAAGATAGTGAAAGAAAAATTTGCTATGGTAGCACCAGATGTCCAAATTGAAGATGGGAAAGGAACAATCCTAATATCTTCCGAAGAGGGAGAGACGGAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:34450265\|34460566	SLBP	0	0	1
chr19:34450265\|34460566	MOV10	0	1	1
chr19:34450265\|34460566	ELAVL1	17	37	3
chr19:34450265\|34460566	DHX9	0	1	2
chr19:34450265\|34460566	SF3B4	2	0	0
chr19:34450265\|34460566	FAM120A	0	0	2
chr19:34450265\|34460566	CELF2	2	0	2
chr19:34450265\|34460566	RC3H1	0	0	1
chr19:34450265\|34460566	PRPF8	0	0	3
chr19:34450265\|34460566	TNRC6A	0	0	1
chr19:34450265\|34460566	FMR1	0	0	14
chr19:34450265\|34460566	CPSF6	0	0	1
chr19:34450265\|34460566	NUDT21	1	0	0
chr19:34450265\|34460566	FUS	3	1	0
chr19:34450265\|34460566	DGCR8	1	1	1
chr19:34450265\|34460566	SRSF1	1	2	9
chr19:34450265\|34460566	U2AF2	8	7	2
chr19:34450265\|34460566	NOP56	4	4	1
chr19:34450265\|34460566	SRSF9	0	0	2
chr19:34450265\|34460566	DDX54	1	0	11
chr19:34450265\|34460566	RBM10	6	3	0
chr19:34450265\|34460566	HNRNPL	0	1	0
chr19:34450265\|34460566	HNRNPM	0	8	0
chr19:34450265\|34460566	SF3A3	2	0	0
chr19:34450265\|34460566	PTBP1	2	7	1
chr19:34450265\|34460566	TARDBP	1	3	2
chr19:34450265\|34460566	SUGP2	0	0	1
chr19:34450265\|34460566	TRA2A	0	0	5
chr19:34450265\|34460566	ZNF184	0	0	2
chr19:34450265\|34460566	HNRNPA1	9	3	0
chr19:34450265\|34460566	ZC3H7B	0	2	3
chr19:34450265\|34460566	LARP7	0	0	1
chr19:34450265\|34460566	SBDS	0	0	1
chr19:34450265\|34460566	MSI2	0	0	1
chr19:34450265\|34460566	ACIN1	0	0	2
chr19:34450265\|34460566	LIN28B	0	1	2
chr19:34450265\|34460566	LIN28A	0	0	1
chr19:34450265\|34460566	FXR1	0	0	3
chr19:34450265\|34460566	FXR2	0	0	4
chr19:34450265\|34460566	IGF2BP1	0	1	7
chr19:34450265\|34460566	DICER1	0	1	0
chr19:34450265\|34460566	IGF2BP3	1	0	7
chr19:34450265\|34460566	IGF2BP2	2	1	14
chr19:34450265\|34460566	FTO	1	0	0
chr19:34450265\|34460566	NOP58	5	5	7
chr19:34450265\|34460566	HNRNPC	3	0	0
chr19:34450265\|34460566	BUD13	0	0	2
chr19:34450265\|34460566	RBFOX2	0	1	0
chr19:34450265\|34460566	CNBP	0	0	2
chr19:34450265\|34460566	SLTM	0	0	1
chr19:34450265\|34460566	EIF4G2	0	0	2
chr19:34450265\|34460566	RBM47	0	0	2
chr19:34450265\|34460566	CSTF2T	1	2	4
chr19:34450265\|34460566	BCCIP	0	1	0
chr19:34450265\|34460566	VIM	0	0	1
chr19:34450265\|34460566	RBM22	0	1	0
chr19:34450265\|34460566	TIAL1	0	1	0
chr19:34450265\|34460566	DKC1	1	0	0
chr19:34450265\|34460566	FBL	0	3	8
chr19:34450265\|34460566	AGO1	0	0	2
chr19:34450265\|34460566	EIF4A3	5	3	5
chr19:34450265\|34460566	AGO2	0	3	5

CircRNA Information