CircRNA Information

General Information
circRNA Basic Information
CircID chr19:34647922|34648068
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTCAGGAGTGGCATCGCATCCACCCAGCTGCTCCAGCCCAACGTGACCCCCTTCCCCACTGCCCCTTGTTCCAGGTACACTGGCCATTTCTCCGACACACTAAACCCTTTCTCATCATGCTGCATTCTCTGCCCCAGACCTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:34647922|34648068 hsa-miR-107 1 1 1
chr19:34647922|34648068 hsa-miR-34a-5p 0 0 1
chr19:34647922|34648068 hsa-miR-34a-3p 0 0 1
chr19:34647922|34648068 hsa-miR-449a 1 0 1
chr19:34647922|34648068 hsa-miR-493-5p 0 0 1
chr19:34647922|34648068 hsa-miR-493-3p 0 0 1
chr19:34647922|34648068 hsa-miR-539-5p 0 0 1
chr19:34647922|34648068 hsa-miR-539-3p 0 0 1
chr19:34647922|34648068 hsa-miR-619-5p 0 0 1
chr19:34647922|34648068 hsa-miR-619-3p 0 0 1
chr19:34647922|34648068 hsa-miR-629-5p 0 0 1
chr19:34647922|34648068 hsa-miR-629-3p 0 0 1
chr19:34647922|34648068 hsa-miR-637 1 0 1
chr19:34647922|34648068 hsa-miR-646 0 0 1
chr19:34647922|34648068 hsa-miR-648 0 0 1
chr19:34647922|34648068 hsa-miR-449b-5p 0 0 1
chr19:34647922|34648068 hsa-miR-449b-3p 0 0 1
chr19:34647922|34648068 hsa-miR-1200 0 0 1
chr19:34647922|34648068 hsa-miR-1293 0 0 1
chr19:34647922|34648068 hsa-miR-1272 0 0 1
chr19:34647922|34648068 hsa-miR-491-5p 0 0 1
chr19:34647922|34648068 hsa-miR-486-3p 1 0 1
chr19:34647922|34648068 hsa-miR-199a-5p 0 0 1
chr19:34647922|34648068 hsa-miR-1207-3p 0 0 1
chr19:34647922|34648068 hsa-miR-199b-5p 0 0 1
chr19:34647922|34648068 hsa-miR-483-3p 0 0 1
chr19:34647922|34648068 hsa-miR-34c-5p 0 0 1
chr19:34647922|34648068 hsa-miR-103 0 0 1
chr19:34647922|34648068 hsa-miR-638 1 0 0
chr19:34647922|34648068 hsa-miR-658 1 0 0
chr19:34647922|34648068 hsa-miR-762 1 1 0
chr19:34647922|34648068 hsa-miR-1182 1 1 0
chr19:34647922|34648068 hsa-miR-1231 1 0 0
chr19:34647922|34648068 hsa-miR-1275 1 0 0
chr19:34647922|34648068 hsa-miR-2110 1 0 0
chr19:34647922|34648068 hsa-miR-2861 1 0 0
chr19:34647922|34648068 hsa-miR-3125 1 0 0
chr19:34647922|34648068 hsa-miR-3132 1 1 0
chr19:34647922|34648068 hsa-miR-3147 1 1 0
chr19:34647922|34648068 hsa-miR-3154 1 0 0
chr19:34647922|34648068 hsa-miR-3165 1 1 0
chr19:34647922|34648068 hsa-miR-3175 1 0 0
chr19:34647922|34648068 hsa-miR-3185 1 0 0
chr19:34647922|34648068 hsa-miR-3196 1 0 0
chr19:34647922|34648068 hsa-miR-3197 1 0 0
chr19:34647922|34648068 hsa-miR-4298 1 0 0
chr19:34647922|34648068 hsa-miR-4260 1 0 0
chr19:34647922|34648068 hsa-miR-3652 1 0 0
chr19:34647922|34648068 hsa-miR-3916 1 0 0
chr19:34647922|34648068 hsa-miR-3937 1 0 0
chr19:34647922|34648068 hsa-miR-3945 1 0 0
chr19:34647922|34648068 hsa-miR-4430 1 1 0
chr19:34647922|34648068 hsa-miR-3135b 1 1 0
chr19:34647922|34648068 hsa-miR-4467 1 0 0
chr19:34647922|34648068 hsa-miR-4476 1 0 0
chr19:34647922|34648068 hsa-miR-4488 1 0 0
chr19:34647922|34648068 hsa-miR-4492 1 0 0
chr19:34647922|34648068 hsa-miR-4498 1 0 0
chr19:34647922|34648068 hsa-miR-4505 1 0 0
chr19:34647922|34648068 hsa-miR-4507 1 0 0
chr19:34647922|34648068 hsa-miR-4516 1 0 0
chr19:34647922|34648068 hsa-miR-4533 1 0 0
chr19:34647922|34648068 hsa-miR-1587 1 1 0
chr19:34647922|34648068 hsa-miR-4651 1 0 0
chr19:34647922|34648068 hsa-miR-4656 1 0 0
chr19:34647922|34648068 hsa-miR-4688 1 1 0
chr19:34647922|34648068 hsa-miR-4741 1 0 0
chr19:34647922|34648068 hsa-miR-4748 1 0 0
chr19:34647922|34648068 hsa-miR-5090 1 1 0
chr19:34647922|34648068 hsa-miR-5681a 1 0 0
chr19:34647922|34648068 hsa-miR-5698 1 0 0
chr19:34647922|34648068 hsa-miR-5787 1 0 0
chr19:34647922|34648068 hsa-miR-6076 1 0 0
chr19:34647922|34648068 hsa-miR-6085 1 0 0
chr19:34647922|34648068 hsa-miR-6124 1 0 0
chr19:34647922|34648068 hsa-miR-6126 1 0 0
chr19:34647922|34648068 hsa-miR-6133 1 0 0
chr19:34647922|34648068 hsa-miR-7974 1 0 0
chr19:34647922|34648068 hsa-miR-8072 1 0 0
chr19:34647922|34648068 hsa-miR-8089 1 0 0
chr19:34647922|34648068 hsa-miR-128-1-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4731-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6765-5p 1 0 0
chr19:34647922|34648068 hsa-miR-7106-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6825-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6857-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6799-5p 1 0 0
chr19:34647922|34648068 hsa-miR-5187-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4695-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6867-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3677-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6730-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1301-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6890-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6727-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6721-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4655-5p 1 0 0
chr19:34647922|34648068 hsa-miR-197-5p 1 1 0
chr19:34647922|34648068 hsa-miR-7845-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6742-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6716-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3151-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1292-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3180-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6772-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6732-5p 1 1 0
chr19:34647922|34648068 hsa-miR-3190-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6805-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6798-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6810-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6786-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6835-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6740-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3944-3p 1 0 0
chr19:34647922|34648068 hsa-miR-185-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1229-5p 1 0 0
chr19:34647922|34648068 hsa-miR-193b-5p 1 0 0
chr19:34647922|34648068 hsa-miR-885-3p 1 0 0
chr19:34647922|34648068 hsa-miR-1228-5p 1 0 0
chr19:34647922|34648068 hsa-miR-296-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6771-5p 1 0 0
chr19:34647922|34648068 hsa-miR-92b-5p 1 0 0
chr19:34647922|34648068 hsa-miR-103a-3p 1 1 0
chr19:34647922|34648068 hsa-miR-4446-3p 1 0 0
chr19:34647922|34648068 hsa-miR-149-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6824-5p 1 0 0
chr19:34647922|34648068 hsa-miR-7156-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6781-5p 1 0 0
chr19:34647922|34648068 hsa-miR-423-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6801-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4750-5p 1 0 0
chr19:34647922|34648068 hsa-miR-10400-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1207-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1233-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4763-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6787-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6816-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6865-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6870-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6775-5p 0 1 0
chr19:34647922|34648068 hsa-miR-1343-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3180 1 0 0
chr19:34647922|34648068 hsa-miR-5001-5p 1 1 0
chr19:34647922|34648068 hsa-miR-6737-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6743-5p 1 1 0
chr19:34647922|34648068 hsa-miR-6752-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6756-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6769a-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6803-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6813-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6819-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6851-5p 1 0 0
chr19:34647922|34648068 hsa-miR-10401-5p 1 0 0
chr19:34647922|34648068 hsa-miR-11181-3p 1 0 0
chr19:34647922|34648068 hsa-miR-1249-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6722-3p 1 0 0
chr19:34647922|34648068 hsa-miR-6751-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6763-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6774-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6779-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6780a-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6788-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6797-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6808-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6879-5p 0 1 0
chr19:34647922|34648068 hsa-miR-7111-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3620-5p 1 1 0
chr19:34647922|34648068 hsa-miR-4728-5p 1 0 0
chr19:34647922|34648068 hsa-miR-5196-5p 1 1 0
chr19:34647922|34648068 hsa-miR-6780b-5p 1 0 0
chr19:34647922|34648068 hsa-miR-10526-3p 1 0 0
chr19:34647922|34648068 hsa-miR-1237-5p 1 0 0
chr19:34647922|34648068 hsa-miR-328-5p 1 0 0
chr19:34647922|34648068 hsa-miR-449c-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4632-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4649-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4725-3p 1 1 0
chr19:34647922|34648068 hsa-miR-4726-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4745-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6729-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6735-5p 1 1 0
chr19:34647922|34648068 hsa-miR-6794-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6795-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6846-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6848-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6858-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6883-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6831-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3085-5p 0 1 0
chr19:34647922|34648068 hsa-miR-3940-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6758-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6856-5p 1 0 0
chr19:34647922|34648068 hsa-miR-7843-5p 1 0 0
chr19:34647922|34648068 hsa-miR-1914-3p 1 0 0
chr19:34647922|34648068 hsa-miR-4665-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6736-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6855-5p 1 0 0
chr19:34647922|34648068 hsa-miR-3116 1 0 0
chr19:34647922|34648068 hsa-miR-4700-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4747-5p 0 1 0
chr19:34647922|34648068 hsa-miR-6891-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6766-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6785-5p 1 0 0
chr19:34647922|34648068 hsa-miR-4667-5p 1 0 0
chr19:34647922|34648068 hsa-miR-6790-5p 1 0 0
chr19:34647922|34648068 hsa-miR-10400-3p 1 0 0
chr19:34647922|34648068 hsa-miR-363-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:34647922|34648068
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MFQVHWPFLRHTKPFLIMLHSLPQTF
Nucleotide Sequence TTGTTCCAGGTACACTGGCCATTTCTCCGACACACTAAACCCTTTCTCATCATGCTGCATTCTCTGCCCCAGACCTTC
CircID chr19:34647922|34648068
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MLQPNVTPFPTAPCSRYTGHFSDTLNPFSSCCILCPRPS
Nucleotide Sequence CTGCTCCAGCCCAACGTGACCCCCTTCCCCACTGCCCCTTGTTCCAGGTACACTGGCCATTTCTCCGACACACTAAACCCTTTCTCATCATGCTGCATTCTCTGCCCCAGACCTTCA
CircID chr19:34647922|34648068
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MMRKGLVCRRNGQCTWNKGQWGRGSRWAGAAGWMRCHS
Nucleotide Sequence ATGATGAGAAAGGGTTTAGTGTGTCGGAGAAATGGCCAGTGTACCTGGAACAAGGGGCAGTGGGGAAGGGGGTCACGTTGGGCTGGAGCAGCTGGGTGGATGCGATGCCACTCCTGA
CircID chr19:34647922|34648068
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MASVPGTRGSGEGGHVGLEQLGGCDATPE
Nucleotide Sequence ATGGCCAGTGTACCTGGAACAAGGGGCAGTGGGGAAGGGGGTCACGTTGGGCTGGAGCAGCTGGGTGGATGCGATGCCACTCCTGAG
CircID chr19:34647922|34648068
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MGQRMQHDEKGFSVSEKWPVYLEQGAVGKGVTLGWSSWVDAMPLLR
Nucleotide Sequence CTGGGGCAGAGAATGCAGCATGATGAGAAAGGGTTTAGTGTGTCGGAGAAATGGCCAGTGTACCTGGAACAAGGGGCAGTGGGGAAGGGGGTCACGTTGGGCTGGAGCAGCTGGGTGGATGCGATGCCACTCCTGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab