CircRNA Information

General Information
circRNA Basic Information
CircID chr19:3468104|3468465
Strand +
CircType exon
Host Gene ENSG00000141905.16;
Algorism CIRI2;
Sequence CCCAGGACTTGAGGGGGCTTTGGTTTTGGGGGGGCCTGGCTGGGACCCAAGATGAGAGGATGGGGTGTGGATGCAGTTGAGGGGCCGGGGCAGCCTGTGTCCCCTTTTTGGAGGGCTCTCTTCCAGCCAGGAGATGTGCGTGGAAGGCTGGGGGGTGGTGGCTTGGGGGTGCATGACTTCCCCTCCGGGGCCCATATTCCTATTGGATCCCCTTCCTCCTTCCTGTCTCAGGTGTGAGCAAAGCCTTGGGGAGGGGGCTGCCATGGACGGGGGGGTGGGGCAGGAGAATCCCAAAGCCACACCAGCAGACATGTGAGGCACTGCTTGGGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:3468104|3468465 hsa-miR-217-5p 0 0 1
chr19:3468104|3468465 hsa-miR-217-3p 0 0 1
chr19:3468104|3468465 hsa-miR-346 0 0 1
chr19:3468104|3468465 hsa-miR-519e-5p 0 0 1
chr19:3468104|3468465 hsa-miR-519e-3p 0 0 1
chr19:3468104|3468465 hsa-miR-632 0 1 1
chr19:3468104|3468465 hsa-miR-635 0 0 1
chr19:3468104|3468465 hsa-miR-1178-5p 0 0 1
chr19:3468104|3468465 hsa-miR-1178-3p 0 0 1
chr19:3468104|3468465 hsa-miR-1228-5p 0 0 1
chr19:3468104|3468465 hsa-miR-1228-3p 0 0 1
chr19:3468104|3468465 hsa-miR-1202 0 0 1
chr19:3468104|3468465 hsa-miR-1247-5p 0 0 1
chr19:3468104|3468465 hsa-miR-1247-3p 0 0 1
chr19:3468104|3468465 hsa-miR-296-5p 1 0 1
chr19:3468104|3468465 hsa-miR-885-3p 0 0 1
chr19:3468104|3468465 hsa-miR-324-5p 0 0 1
chr19:3468104|3468465 hsa-miR-361-3p 0 0 1
chr19:3468104|3468465 hsa-miR-654-3p 0 1 1
chr19:3468104|3468465 hsa-miR-324-3p 0 0 1
chr19:3468104|3468465 hsa-miR-769-3p 0 0 1
chr19:3468104|3468465 hsa-miR-515-3p 0 0 1
chr19:3468104|3468465 hsa-miR-502-3p 0 0 1
chr19:3468104|3468465 hsa-miR-501-3p 0 0 1
chr19:3468104|3468465 hsa-miR-450b-3p 0 0 1
chr19:3468104|3468465 hsa-miR-342-3p 0 0 1
chr19:3468104|3468465 hsa-miR-220b 0 0 1
chr19:3468104|3468465 hsa-miR-1233 0 0 1
chr19:3468104|3468465 hsa-miR-7 0 0 1
chr19:3468104|3468465 hsa-miR-644 0 0 1
chr19:3468104|3468465 hsa-miR-138 0 0 1
chr19:3468104|3468465 hsa-miR-220a 0 0 1
chr19:3468104|3468465 hsa-miR-596 1 0 0
chr19:3468104|3468465 hsa-miR-602 1 0 0
chr19:3468104|3468465 hsa-miR-1470 1 1 0
chr19:3468104|3468465 hsa-miR-1913 1 1 0
chr19:3468104|3468465 hsa-miR-1976 1 1 0
chr19:3468104|3468465 hsa-miR-3154 0 1 0
chr19:3468104|3468465 hsa-miR-3188 1 0 0
chr19:3468104|3468465 hsa-miR-4298 1 1 0
chr19:3468104|3468465 hsa-miR-4313 1 1 0
chr19:3468104|3468465 hsa-miR-4320 0 1 0
chr19:3468104|3468465 hsa-miR-4281 1 0 0
chr19:3468104|3468465 hsa-miR-3652 0 1 0
chr19:3468104|3468465 hsa-miR-3943 1 1 0
chr19:3468104|3468465 hsa-miR-4430 0 1 0
chr19:3468104|3468465 hsa-miR-4476 0 1 0
chr19:3468104|3468465 hsa-miR-4533 0 1 0
chr19:3468104|3468465 hsa-miR-3972 1 0 0
chr19:3468104|3468465 hsa-miR-4739 1 1 0
chr19:3468104|3468465 hsa-miR-7977 0 1 0
chr19:3468104|3468465 hsa-miR-9899 1 0 0
chr19:3468104|3468465 hsa-miR-12116 1 0 0
chr19:3468104|3468465 hsa-miR-12118 0 1 0
chr19:3468104|3468465 hsa-miR-134-3p 1 0 0
chr19:3468104|3468465 hsa-miR-4665-3p 1 0 0
chr19:3468104|3468465 hsa-miR-7106-5p 0 1 0
chr19:3468104|3468465 hsa-miR-766-3p 1 0 0
chr19:3468104|3468465 hsa-miR-210-5p 1 0 0
chr19:3468104|3468465 hsa-miR-3692-5p 0 1 0
chr19:3468104|3468465 hsa-miR-766-5p 0 1 0
chr19:3468104|3468465 hsa-miR-4755-3p 0 1 0
chr19:3468104|3468465 hsa-miR-3189-5p 1 1 0
chr19:3468104|3468465 hsa-miR-6849-3p 0 1 0
chr19:3468104|3468465 hsa-miR-6787-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6783-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6882-3p 1 1 0
chr19:3468104|3468465 hsa-miR-4436b-5p 1 0 0
chr19:3468104|3468465 hsa-miR-6884-3p 0 1 0
chr19:3468104|3468465 hsa-miR-939-3p 1 0 0
chr19:3468104|3468465 hsa-miR-4763-5p 1 1 0
chr19:3468104|3468465 hsa-miR-6763-3p 1 0 0
chr19:3468104|3468465 hsa-miR-4707-3p 1 0 0
chr19:3468104|3468465 hsa-miR-3944-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6501-5p 0 1 0
chr19:3468104|3468465 hsa-miR-7111-3p 0 1 0
chr19:3468104|3468465 hsa-miR-4640-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6769a-3p 1 0 0
chr19:3468104|3468465 hsa-miR-339-5p 1 0 0
chr19:3468104|3468465 hsa-miR-3191-3p 0 1 0
chr19:3468104|3468465 hsa-miR-4707-5p 1 0 0
chr19:3468104|3468465 hsa-miR-1237-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6826-5p 0 1 0
chr19:3468104|3468465 hsa-miR-4758-3p 1 1 0
chr19:3468104|3468465 hsa-miR-1251-3p 0 1 0
chr19:3468104|3468465 hsa-miR-519d-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6513-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6752-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6746-3p 1 0 0
chr19:3468104|3468465 hsa-miR-483-5p 0 1 0
chr19:3468104|3468465 hsa-miR-4749-3p 1 1 0
chr19:3468104|3468465 hsa-miR-6777-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6851-3p 1 0 0
chr19:3468104|3468465 hsa-miR-4433a-5p 1 1 0
chr19:3468104|3468465 hsa-miR-4750-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6798-3p 0 1 0
chr19:3468104|3468465 hsa-miR-4433b-5p 1 1 0
chr19:3468104|3468465 hsa-miR-6729-3p 1 0 0
chr19:3468104|3468465 hsa-miR-3162-3p 1 0 0
chr19:3468104|3468465 hsa-miR-4787-3p 1 0 0
chr19:3468104|3468465 hsa-miR-3617-3p 1 0 0
chr19:3468104|3468465 hsa-miR-1249-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6808-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6780b-5p 0 1 0
chr19:3468104|3468465 hsa-miR-10526-3p 0 1 0
chr19:3468104|3468465 hsa-miR-4685-5p 1 0 0
chr19:3468104|3468465 hsa-miR-4725-3p 0 1 0
chr19:3468104|3468465 hsa-miR-10396a-3p 1 1 0
chr19:3468104|3468465 hsa-miR-10396b-3p 1 1 0
chr19:3468104|3468465 hsa-miR-6773-5p 0 1 0
chr19:3468104|3468465 hsa-miR-3173-3p 0 1 0
chr19:3468104|3468465 hsa-miR-6876-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6891-5p 0 1 0
chr19:3468104|3468465 hsa-miR-302a-3p 1 0 0
chr19:3468104|3468465 hsa-miR-302d-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6724-5p 1 1 0
chr19:3468104|3468465 hsa-miR-4722-3p 1 0 0
chr19:3468104|3468465 hsa-miR-193b-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6784-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6862-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6829-3p 1 0 0
chr19:3468104|3468465 hsa-miR-10392-3p 1 1 0
chr19:3468104|3468465 hsa-miR-483-3p 1 0 0
chr19:3468104|3468465 hsa-miR-6891-3p 1 0 0
chr19:3468104|3468465 hsa-miR-3085-3p 1 1 0
chr19:3468104|3468465 hsa-miR-5581-5p 0 1 0
chr19:3468104|3468465 hsa-miR-6859-5p 0 1 0
chr19:3468104|3468465 hsa-miR-33b-3p 0 1 0
chr19:3468104|3468465 hsa-miR-6807-3p 1 1 0
chr19:3468104|3468465 hsa-miR-6766-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:3468104|3468465
ORF Type ORF1
Protein Length 65
Nucleotide Length 198
Protein Sequence MGPKMRGWGVDAVEGPGQPVSPFWRALFQPGDVRGRLGGGGLGVHDFPSGAHIPIGSPSSFLSQV
Nucleotide Sequence CTGGGACCCAAGATGAGAGGATGGGGTGTGGATGCAGTTGAGGGGCCGGGGCAGCCTGTGTCCCCTTTTTGGAGGGCTCTCTTCCAGCCAGGAGATGTGCGTGGAAGGCTGGGGGGTGGTGGCTTGGGGGTGCATGACTTCCCCTCCGGGGCCCATATTCCTATTGGATCCCCTTCCTCCTTCCTGTCTCAGGTGTGA

CircID chr19:3468104|3468465
ORF Type ORF2
Protein Length 81
Nucleotide Length 246
Protein Sequence MQLRGRGSLCPLFGGLSSSQEMCVEGWGVVAWGCMTSPPGPIFLLDPLPPSCLRCEQSLGEGAAMDGGVGQENPKATPADM
Nucleotide Sequence ATGCAGTTGAGGGGCCGGGGCAGCCTGTGTCCCCTTTTTGGAGGGCTCTCTTCCAGCCAGGAGATGTGCGTGGAAGGCTGGGGGGTGGTGGCTTGGGGGTGCATGACTTCCCCTCCGGGGCCCATATTCCTATTGGATCCCCTTCCTCCTTCCTGTCTCAGGTGTGAGCAAAGCCTTGGGGAGGGGGCTGCCATGGACGGGGGGGTGGGGCAGGAGAATCCCAAAGCCACACCAGCAGACATGTGA

CircID chr19:3468104|3468465
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MGRGLPWTGGWGRRIPKPHQQTCEALLGKSLFWYHWQQV
Nucleotide Sequence TTGGGGAGGGGGCTGCCATGGACGGGGGGGTGGGGCAGGAGAATCCCAAAGCCACACCAGCAGACATGTGAGGCACTGCTTGGGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTC

CircID chr19:3468104|3468465
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MLPVIPKQTFPKQCLTCLLVWLWDSPAPPPRPWQPPPQGFAHT
Nucleotide Sequence TTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCTGCTGGTGTGGCTTTGGGATTCTCCTGCCCCACCCCCCCGTCCATGGCAGCCCCCTCCCCAAGGCTTTGCTCACACCTGA

CircID chr19:3468104|3468465
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MPHPPVHGSPLPKALLTPETGRRKGIQ
Nucleotide Sequence CTGCCCCACCCCCCCGTCCATGGCAGCCCCCTCCCCAAGGCTTTGCTCACACCTGAGACAGGAAGGAGGAAGGGGATCCAATAG

CircID chr19:3468104|3468465
ORF Type ORF6
Protein Length 43
Nucleotide Length 129
Protein Sequence MAGREPSKKGTQAAPAPQLHPHPILSSWVPARPPQNQSPLKSW
Nucleotide Sequence CTGGCTGGAAGAGAGCCCTCCAAAAAGGGGACACAGGCTGCCCCGGCCCCTCAACTGCATCCACACCCCATCCTCTCATCTTGGGTCCCAGCCAGGCCCCCCCAAAACCAAAGCCCCCTCAAGTCCTGG

CircID chr19:3468104|3468465
ORF Type ORF7
Protein Length 104
Nucleotide Length 312
Protein Sequence MSAGVALGFSCPTPPSMAAPSPRLCSHLRQEGGRGSNRNMGPGGEVMHPQATTPQPSTHISWLEESPPKRGHRLPRPLNCIHTPSSHLGSQPGPPKTKAPSSPG
Nucleotide Sequence ATGTCTGCTGGTGTGGCTTTGGGATTCTCCTGCCCCACCCCCCCGTCCATGGCAGCCCCCTCCCCAAGGCTTTGCTCACACCTGAGACAGGAAGGAGGAAGGGGATCCAATAGGAATATGGGCCCCGGAGGGGAAGTCATGCACCCCCAAGCCACCACCCCCCAGCCTTCCACGCACATCTCCTGGCTGGAAGAGAGCCCTCCAAAAAGGGGACACAGGCTGCCCCGGCCCCTCAACTGCATCCACACCCCATCCTCTCATCTTGGGTCCCAGCCAGGCCCCCCCAAAACCAAAGCCCCCTCAAGTCCTGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites