CircRNA Information

General Information
circRNA Basic Information
CircID chr19:35115904|35116301
Strand -
CircType exon
Host Gene ENSG00000089356.15;
Algorism CIRI2;
Sequence AACTGCCAGCAATCCTTCCACCAGGCAAAACACATCATCTAAGGAAAAGAAGTGAGGTCGGAACACCAACGCATCATCTCACTGCATGGCCCTGGAGGCTCTGCCGTTTAAAGACCCCAGAACCTTCCCCATTCAAGGTCCTCTCCTGGGCACAGGAGATTGGAGAAAGCTCCTCCCTTAATTCCAGGGGCCGAGTTCCAGCCCATCCAATTCTCCGTCTCACCTGAGGCTGCTGTGGTCCTGGTGACCCCAGGGAGCAACCTGCCGCCCATGGCTGGGGAGGGGGTGAAGCTGTCTCTTTAAGAGCAGGAATGGAGCCCCTGGGCCTCAGGGCATCTGACTTGTTTTCTACCTGCCCAGGTTTGCTTAGGGCGTGGCAGCTTCGGATAAACGCAGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:35115904|35116301 hsa-miR-22-5p 0 0 1
chr19:35115904|35116301 hsa-miR-22-3p 0 0 1
chr19:35115904|35116301 hsa-miR-34a-5p 0 0 1
chr19:35115904|35116301 hsa-miR-34a-3p 0 0 1
chr19:35115904|35116301 hsa-miR-143-5p 0 0 1
chr19:35115904|35116301 hsa-miR-143-3p 0 0 1
chr19:35115904|35116301 hsa-miR-136-5p 0 0 1
chr19:35115904|35116301 hsa-miR-136-3p 0 0 1
chr19:35115904|35116301 hsa-miR-370-5p 0 0 1
chr19:35115904|35116301 hsa-miR-370-3p 0 0 1
chr19:35115904|35116301 hsa-miR-449a 0 0 1
chr19:35115904|35116301 hsa-miR-412-5p 0 0 1
chr19:35115904|35116301 hsa-miR-412-3p 0 0 1
chr19:35115904|35116301 hsa-miR-553 0 0 1
chr19:35115904|35116301 hsa-miR-570-5p 0 0 1
chr19:35115904|35116301 hsa-miR-570-3p 0 0 1
chr19:35115904|35116301 hsa-miR-583 0 0 1
chr19:35115904|35116301 hsa-miR-612 1 1 1
chr19:35115904|35116301 hsa-miR-637 1 0 1
chr19:35115904|35116301 hsa-miR-661 0 0 1
chr19:35115904|35116301 hsa-miR-449b-5p 0 0 1
chr19:35115904|35116301 hsa-miR-449b-3p 0 0 1
chr19:35115904|35116301 hsa-miR-657 0 1 1
chr19:35115904|35116301 hsa-miR-765 0 0 1
chr19:35115904|35116301 hsa-miR-874-5p 0 0 1
chr19:35115904|35116301 hsa-miR-874-3p 0 0 1
chr19:35115904|35116301 hsa-miR-708-5p 0 0 1
chr19:35115904|35116301 hsa-miR-708-3p 0 0 1
chr19:35115904|35116301 hsa-miR-665 0 0 1
chr19:35115904|35116301 hsa-miR-1226-5p 0 0 1
chr19:35115904|35116301 hsa-miR-1226-3p 0 0 1
chr19:35115904|35116301 hsa-miR-1276 0 0 1
chr19:35115904|35116301 hsa-miR-1321 0 0 1
chr19:35115904|35116301 hsa-miR-1322 0 0 1
chr19:35115904|35116301 hsa-miR-125a-3p 1 1 1
chr19:35115904|35116301 hsa-miR-139-3p 0 0 1
chr19:35115904|35116301 hsa-miR-615-5p 0 0 1
chr19:35115904|35116301 hsa-miR-193a-5p 0 1 1
chr19:35115904|35116301 hsa-miR-146b-3p 0 0 1
chr19:35115904|35116301 hsa-miR-490-3p 0 0 1
chr19:35115904|35116301 hsa-miR-28-5p 0 1 1
chr19:35115904|35116301 hsa-miR-331-3p 0 0 1
chr19:35115904|35116301 hsa-miR-140-3p 0 0 1
chr19:35115904|35116301 hsa-miR-125a-5p 0 1 1
chr19:35115904|35116301 hsa-miR-34c-5p 0 0 1
chr19:35115904|35116301 hsa-miR-515-5p 0 0 1
chr19:35115904|35116301 hsa-miR-125b 0 0 1
chr19:35115904|35116301 hsa-miR-1285 0 0 1
chr19:35115904|35116301 hsa-miR-1254 0 0 1
chr19:35115904|35116301 hsa-miR-608 1 0 0
chr19:35115904|35116301 hsa-miR-762 1 1 0
chr19:35115904|35116301 hsa-miR-1538 1 0 0
chr19:35115904|35116301 hsa-miR-2110 1 0 0
chr19:35115904|35116301 hsa-miR-3132 0 1 0
chr19:35115904|35116301 hsa-miR-3139 0 1 0
chr19:35115904|35116301 hsa-miR-3141 1 0 0
chr19:35115904|35116301 hsa-miR-3193 1 1 0
chr19:35115904|35116301 hsa-miR-3196 1 0 0
chr19:35115904|35116301 hsa-miR-4308 0 1 0
chr19:35115904|35116301 hsa-miR-4271 1 0 0
chr19:35115904|35116301 hsa-miR-3918 0 1 0
chr19:35115904|35116301 hsa-miR-4476 0 1 0
chr19:35115904|35116301 hsa-miR-4516 1 0 0
chr19:35115904|35116301 hsa-miR-4533 0 1 0
chr19:35115904|35116301 hsa-miR-1587 1 1 0
chr19:35115904|35116301 hsa-miR-4651 1 0 0
chr19:35115904|35116301 hsa-miR-4736 0 1 0
chr19:35115904|35116301 hsa-miR-4739 1 1 0
chr19:35115904|35116301 hsa-miR-5572 1 0 0
chr19:35115904|35116301 hsa-miR-5787 1 0 0
chr19:35115904|35116301 hsa-miR-6088 0 1 0
chr19:35115904|35116301 hsa-miR-6860 1 1 0
chr19:35115904|35116301 hsa-miR-8089 1 0 0
chr19:35115904|35116301 hsa-miR-12127 1 0 0
chr19:35115904|35116301 hsa-miR-125b-2-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6840-3p 0 1 0
chr19:35115904|35116301 hsa-miR-7155-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6765-5p 1 0 0
chr19:35115904|35116301 hsa-miR-3150a-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6861-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6825-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6894-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6857-5p 1 0 0
chr19:35115904|35116301 hsa-miR-25-5p 0 1 0
chr19:35115904|35116301 hsa-miR-6880-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4653-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6890-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6820-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6793-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6796-5p 1 0 0
chr19:35115904|35116301 hsa-miR-185-3p 1 0 0
chr19:35115904|35116301 hsa-miR-3190-3p 1 1 0
chr19:35115904|35116301 hsa-miR-6728-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6821-5p 1 0 0
chr19:35115904|35116301 hsa-miR-5008-5p 0 1 0
chr19:35115904|35116301 hsa-miR-6852-5p 1 1 0
chr19:35115904|35116301 hsa-miR-1229-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6784-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6753-5p 0 1 0
chr19:35115904|35116301 hsa-miR-1228-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6771-5p 1 0 0
chr19:35115904|35116301 hsa-miR-149-3p 1 0 0
chr19:35115904|35116301 hsa-miR-4733-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6824-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4640-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6886-5p 1 0 0
chr19:35115904|35116301 hsa-miR-5010-5p 1 0 0
chr19:35115904|35116301 hsa-miR-7112-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6895-5p 0 1 0
chr19:35115904|35116301 hsa-miR-4707-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6508-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6882-5p 0 1 0
chr19:35115904|35116301 hsa-miR-3160-5p 0 1 0
chr19:35115904|35116301 hsa-miR-1914-5p 0 1 0
chr19:35115904|35116301 hsa-miR-4649-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6802-3p 0 1 0
chr19:35115904|35116301 hsa-miR-541-5p 0 1 0
chr19:35115904|35116301 hsa-miR-6731-3p 1 0 0
chr19:35115904|35116301 hsa-miR-1207-5p 1 0 0
chr19:35115904|35116301 hsa-miR-1233-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4763-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6778-5p 0 1 0
chr19:35115904|35116301 hsa-miR-6812-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6816-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6870-5p 1 0 0
chr19:35115904|35116301 hsa-miR-1343-5p 1 0 0
chr19:35115904|35116301 hsa-miR-5001-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6737-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6756-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6803-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6819-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6842-5p 1 0 0
chr19:35115904|35116301 hsa-miR-1249-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6751-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6763-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6774-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6779-5p 1 0 0
chr19:35115904|35116301 hsa-miR-7111-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6754-3p 0 1 0
chr19:35115904|35116301 hsa-miR-1915-3p 0 1 0
chr19:35115904|35116301 hsa-miR-3620-5p 1 1 0
chr19:35115904|35116301 hsa-miR-4728-5p 1 0 0
chr19:35115904|35116301 hsa-miR-5189-5p 1 1 0
chr19:35115904|35116301 hsa-miR-5196-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6780b-5p 1 1 0
chr19:35115904|35116301 hsa-miR-328-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4632-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4649-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4685-5p 1 1 0
chr19:35115904|35116301 hsa-miR-4725-3p 1 1 0
chr19:35115904|35116301 hsa-miR-4745-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6729-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6848-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6858-5p 1 0 0
chr19:35115904|35116301 hsa-miR-3187-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6831-5p 0 1 0
chr19:35115904|35116301 hsa-miR-939-5p 1 0 0
chr19:35115904|35116301 hsa-miR-1238-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4758-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4769-5p 0 1 0
chr19:35115904|35116301 hsa-miR-3940-5p 1 0 0
chr19:35115904|35116301 hsa-miR-1285-3p 0 1 0
chr19:35115904|35116301 hsa-miR-6736-5p 1 0 0
chr19:35115904|35116301 hsa-miR-4747-5p 1 1 0
chr19:35115904|35116301 hsa-miR-4716-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6790-5p 1 0 0
chr19:35115904|35116301 hsa-miR-6791-5p 1 1 0
chr19:35115904|35116301 hsa-miR-6805-3p 1 0 0
chr19:35115904|35116301 hsa-miR-6837-5p 1 1 0
chr19:35115904|35116301 hsa-miR-4756-5p 0 1 0
chr19:35115904|35116301 hsa-miR-4691-5p 0 1 0
chr19:35115904|35116301 hsa-miR-619-5p 0 1 0
chr19:35115904|35116301 hsa-miR-10527-5p 0 1 0
chr19:35115904|35116301 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:35115904|35116301
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MEKAPPLIPGAEFQPIQFSVSPEAAVVLVTPGSNLPPMAGEGVKLSL
Nucleotide Sequence TTGGAGAAAGCTCCTCCCTTAATTCCAGGGGCCGAGTTCCAGCCCATCCAATTCTCCGTCTCACCTGAGGCTGCTGTGGTCCTGGTGACCCCAGGGAGCAACCTGCCGCCCATGGCTGGGGAGGGGGTGAAGCTGTCTCTTTAA
CircID chr19:35115904|35116301
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MALEALPFKDPRTFPIQGPLLGTGDWRKLLP
Nucleotide Sequence ATGGCCCTGGAGGCTCTGCCGTTTAAAGACCCCAGAACCTTCCCCATTCAAGGTCCTCTCCTGGGCACAGGAGATTGGAGAAAGCTCCTCCCTTAA
CircID chr19:35115904|35116301
ORF Type ORF3
Protein Length 74
Nucleotide Length 225
Protein Sequence LPAILPPGKTHHLRKRSEVGTPTHHLTAWPWRLCRLKTPEPSPFKVLSWAQEIGESSSLNSRGRVPAHPILRLT
Nucleotide Sequence CTGCCAGCAATCCTTCCACCAGGCAAAACACATCATCTAAGGAAAAGAAGTGAGGTCGGAACACCAACGCATCATCTCACTGCATGGCCCTGGAGGCTCTGCCGTTTAAAGACCCCAGAACCTTCCCCATTCAAGGTCCTCTCCTGGGCACAGGAGATTGGAGAAAGCTCCTCCCTTAATTCCAGGGGCCGAGTTCCAGCCCATCCAATTCTCCGTCTCACCTGA
CircID chr19:35115904|35116301
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MEPLGLRASDLFSTCPGLLRAWQLRINAG
Nucleotide Sequence ATGGAGCCCCTGGGCCTCAGGGCATCTGACTTGTTTTCTACCTGCCCAGGTTTGCTTAGGGCGTGGCAGCTTCGGATAAACGCAGGA
CircID chr19:35115904|35116301
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MPRPKQTWAGRKQVRCPEAQGLHSCS
Nucleotide Sequence CTGCCACGCCCTAAGCAAACCTGGGCAGGTAGAAAACAAGTCAGATGCCCTGAGGCCCAGGGGCTCCATTCCTGCTCTTAA
CircID chr19:35115904|35116301
ORF Type ORF6
Protein Length 54
Nucleotide Length 165
Protein Sequence MGGRLLPGVTRTTAASGETENWMGWNSAPGIKGGAFSNLLCPGEDLEWGRFWGL
Nucleotide Sequence ATGGGCGGCAGGTTGCTCCCTGGGGTCACCAGGACCACAGCAGCCTCAGGTGAGACGGAGAATTGGATGGGCTGGAACTCGGCCCCTGGAATTAAGGGAGGAGCTTTCTCCAATCTCCTGTGCCCAGGAGAGGACCTTGAATGGGGAAGGTTCTGGGGTCTTTAA
CircID chr19:35115904|35116301
ORF Type ORF7
Protein Length 85
Nucleotide Length 258
Protein Sequence MRPRGSIPALKETASPPPQPWAAGCSLGSPGPQQPQVRRRIGWAGTRPLELREELSPISCAQERTLNGEGSGVFKRQSLQGHAVR
Nucleotide Sequence CTGAGGCCCAGGGGCTCCATTCCTGCTCTTAAAGAGACAGCTTCACCCCCTCCCCAGCCATGGGCGGCAGGTTGCTCCCTGGGGTCACCAGGACCACAGCAGCCTCAGGTGAGACGGAGAATTGGATGGGCTGGAACTCGGCCCCTGGAATTAAGGGAGGAGCTTTCTCCAATCTCCTGTGCCCAGGAGAGGACCTTGAATGGGGAAGGTTCTGGGGTCTTTAAACGGCAGAGCCTCCAGGGCCATGCAGTGAGATGA
CircID chr19:35115904|35116301
ORF Type ORF8
Protein Length 29
Nucleotide Length 90
Protein Sequence MLLKRQLHPLPSHGRQVAPWGHQDHSSLR
Nucleotide Sequence CTGCTCTTAAAGAGACAGCTTCACCCCCTCCCCAGCCATGGGCGGCAGGTTGCTCCCTGGGGTCACCAGGACCACAGCAGCCTCAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab