CircRNA Information

General Information
circRNA Basic Information
CircID chr19:35267346|35267528
Strand +
CircType exon
Host Gene ENSG00000105699.15;
Algorism CIRI2;
Sequence GGTGGTGGTGGGACCTGGGGTCGGCAGGAGGGCGCTCCCGAGACCTGAAGTCGTCGTAGTGGGGGTCCCGGGAGCGTGGGAAGTCCCTCGAGTCGTCTTGGTCATAGAGGTCGTCCCGGCTGCGGCTCCGCGGGGGCATGTAGGCCCGGCTTCTCCCACCATTACTCGTGGGAGACCTGCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:35267346|35267528 hsa-miR-150-5p 0 0 1
chr19:35267346|35267528 hsa-miR-150-3p 0 0 1
chr19:35267346|35267528 hsa-miR-617 0 1 1
chr19:35267346|35267528 hsa-miR-662 0 0 1
chr19:35267346|35267528 hsa-miR-541-5p 0 0 1
chr19:35267346|35267528 hsa-miR-541-3p 0 0 1
chr19:35267346|35267528 hsa-miR-532-3p 0 0 1
chr19:35267346|35267528 hsa-miR-654-5p 0 0 1
chr19:35267346|35267528 hsa-miR-339-3p 0 1 1
chr19:35267346|35267528 hsa-miR-1224-3p 0 0 1
chr19:35267346|35267528 hsa-miR-188-3p 0 0 1
chr19:35267346|35267528 hsa-miR-220b 0 0 1
chr19:35267346|35267528 hsa-miR-1260 0 0 1
chr19:35267346|35267528 hsa-miR-1280 0 0 1
chr19:35267346|35267528 hsa-miR-638 1 0 0
chr19:35267346|35267528 hsa-miR-663a 1 0 0
chr19:35267346|35267528 hsa-miR-1260a 0 1 0
chr19:35267346|35267528 hsa-miR-1913 1 0 0
chr19:35267346|35267528 hsa-miR-1976 0 1 0
chr19:35267346|35267528 hsa-miR-1260b 0 1 0
chr19:35267346|35267528 hsa-miR-4301 0 1 0
chr19:35267346|35267528 hsa-miR-4290 0 1 0
chr19:35267346|35267528 hsa-miR-3972 1 0 0
chr19:35267346|35267528 hsa-miR-4651 1 0 0
chr19:35267346|35267528 hsa-miR-5193 1 0 0
chr19:35267346|35267528 hsa-miR-5703 0 1 0
chr19:35267346|35267528 hsa-miR-6071 1 0 0
chr19:35267346|35267528 hsa-miR-6081 0 1 0
chr19:35267346|35267528 hsa-miR-11399 0 1 0
chr19:35267346|35267528 hsa-miR-1247-3p 0 1 0
chr19:35267346|35267528 hsa-miR-6747-3p 1 0 0
chr19:35267346|35267528 hsa-miR-4726-3p 0 1 0
chr19:35267346|35267528 hsa-miR-6089 1 0 0
chr19:35267346|35267528 hsa-miR-874-5p 1 0 0
chr19:35267346|35267528 hsa-miR-4728-3p 1 0 0
chr19:35267346|35267528 hsa-miR-6850-5p 1 0 0
chr19:35267346|35267528 hsa-miR-1343-3p 1 1 0
chr19:35267346|35267528 hsa-miR-4763-5p 1 0 0
chr19:35267346|35267528 hsa-miR-4707-3p 1 0 0
chr19:35267346|35267528 hsa-miR-6894-3p 1 0 0
chr19:35267346|35267528 hsa-miR-30c-2-3p 0 1 0
chr19:35267346|35267528 hsa-miR-6771-5p 1 0 0
chr19:35267346|35267528 hsa-miR-4667-3p 1 1 0
chr19:35267346|35267528 hsa-miR-6825-3p 1 0 0
chr19:35267346|35267528 hsa-miR-1237-3p 1 0 0
chr19:35267346|35267528 hsa-miR-4687-5p 0 1 0
chr19:35267346|35267528 hsa-miR-6859-3p 1 1 0
chr19:35267346|35267528 hsa-miR-4433a-5p 0 1 0
chr19:35267346|35267528 hsa-miR-4750-3p 1 0 0
chr19:35267346|35267528 hsa-miR-6846-3p 1 0 0
chr19:35267346|35267528 hsa-miR-6510-3p 1 0 0
chr19:35267346|35267528 hsa-miR-1233-5p 0 1 0
chr19:35267346|35267528 hsa-miR-1249-5p 1 0 0
chr19:35267346|35267528 hsa-miR-6779-5p 1 1 0
chr19:35267346|35267528 hsa-miR-6788-5p 0 1 0
chr19:35267346|35267528 hsa-miR-10396a-5p 1 0 0
chr19:35267346|35267528 hsa-miR-10396b-5p 1 0 0
chr19:35267346|35267528 hsa-miR-4749-5p 1 0 0
chr19:35267346|35267528 hsa-miR-6887-5p 1 0 0
chr19:35267346|35267528 hsa-miR-30c-1-3p 0 1 0
chr19:35267346|35267528 hsa-miR-1199-5p 1 0 0
chr19:35267346|35267528 hsa-miR-6727-3p 1 0 0
chr19:35267346|35267528 hsa-miR-6893-3p 1 0 0
chr19:35267346|35267528 hsa-miR-4757-5p 1 0 0
chr19:35267346|35267528 hsa-miR-10392-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:35267346|35267528
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MVIEVVPAAAPRGHVGPASPTITRGRPA
Nucleotide Sequence TTGGTCATAGAGGTCGTCCCGGCTGCGGCTCCGCGGGGGCATGTAGGCCCGGCTTCTCCCACCATTACTCGTGGGAGACCTGCT

CircID chr19:35267346|35267528
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MVGEAGPTCPRGAAAGTTSMTKTTRGTSHAPGTPTTTTSGLGSALLPTPGPTTT
Nucleotide Sequence ATGGTGGGAGAAGCCGGGCCTACATGCCCCCGCGGAGCCGCAGCCGGGACGACCTCTATGACCAAGACGACTCGAGGGACTTCCCACGCTCCCGGGACCCCCACTACGACGACTTCAGGTCTCGGGAGCGCCCTCCTGCCGACCCCAGGTCCCACCACCACC

CircID chr19:35267346|35267528
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MPPRSRSRDDLYDQDDSRDFPRSRDPHYDDFRSRERPPADPRSHHH
Nucleotide Sequence ATGCCCCCGCGGAGCCGCAGCCGGGACGACCTCTATGACCAAGACGACTCGAGGGACTTCCCACGCTCCCGGGACCCCCACTACGACGACTTCAGGTCTCGGGAGCGCCCTCCTGCCGACCCCAGGTCCCACCACCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites