CircNet

General Information

circRNA Basic Information

CircID	chr19:3535804\|3535974
Strand	-
CircType	exon
Host Gene	ENSG00000105325.12;
Algorism	CIRI2;
Sequence	CTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGCAGGGAGGGAGGCAAGGCAGGGGAGTGGGGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:3535804\|3535974	hsa-miR-370-5p	0	0	1
chr19:3535804\|3535974	hsa-miR-370-3p	0	0	1
chr19:3535804\|3535974	hsa-miR-661	0	0	1
chr19:3535804\|3535974	hsa-miR-920	0	0	1
chr19:3535804\|3535974	hsa-miR-193a-5p	0	0	1
chr19:3535804\|3535974	hsa-miR-1224-3p	0	1	1
chr19:3535804\|3535974	hsa-miR-331-3p	0	0	1
chr19:3535804\|3535974	hsa-miR-516a-5p	0	0	1
chr19:3535804\|3535974	hsa-miR-138	0	0	1
chr19:3535804\|3535974	hsa-miR-3137	1	1	0
chr19:3535804\|3535974	hsa-miR-4298	0	1	0
chr19:3535804\|3535974	hsa-miR-4286	0	1	0
chr19:3535804\|3535974	hsa-miR-3919	0	1	0
chr19:3535804\|3535974	hsa-miR-4469	0	1	0
chr19:3535804\|3535974	hsa-miR-2392	0	1	0
chr19:3535804\|3535974	hsa-miR-4739	1	0	0
chr19:3535804\|3535974	hsa-miR-9899	0	1	0
chr19:3535804\|3535974	hsa-miR-1843	0	1	0
chr19:3535804\|3535974	hsa-miR-6749-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6747-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6836-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-212-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-3150a-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6894-5p	1	1	0
chr19:3535804\|3535974	hsa-miR-4687-3p	1	1	0
chr19:3535804\|3535974	hsa-miR-8071	0	1	0
chr19:3535804\|3535974	hsa-miR-3192-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-6741-5p	1	0	0
chr19:3535804\|3535974	hsa-miR-1915-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-2467-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6882-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-939-3p	1	0	0
chr19:3535804\|3535974	hsa-miR-7113-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6847-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-6780a-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-3690	0	1	0
chr19:3535804\|3535974	hsa-miR-3189-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-4758-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6752-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-1306-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-3173-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-6846-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6789-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6775-5p	0	1	0
chr19:3535804\|3535974	hsa-miR-4685-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-939-5p	1	1	0
chr19:3535804\|3535974	hsa-miR-6799-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-1271-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6724-5p	1	0	0
chr19:3535804\|3535974	hsa-miR-6893-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-6810-3p	0	1	0
chr19:3535804\|3535974	hsa-miR-4756-5p	1	0	0
chr19:3535804\|3535974	hsa-miR-6783-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:3535804\|3535974
ORF Type	ORF1
Protein Length	57
Nucleotide Length	171
Protein Sequence	LSCPPAPTAVGKPRRPKGSRRWAPSILREASQAPLLLCLMLPGCTAGREGGKAGEWG
Nucleotide Sequence	CTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGCAGGGAGGGAGGCAAGGCAGGGGAGTGGGGC

CircID	chr19:3535804\|3535974
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MSTSANSRGEAKETQGVQEVGALHPSRSFPGSSASLSHAPRLHSRQGGRQGRGVG
Nucleotide Sequence	CTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGCAGGGAGGGAGGCAAGGCAGGGGAGTGGGG

CircID	chr19:3535804\|3535974
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGSFSKDGGRPPPGPLGSPWLPHGCWRWWTGQ
Nucleotide Sequence	CTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAG

CircID	chr19:3535804\|3535974
ORF Type	ORF4
Protein Length	51
Nucleotide Length	153
Protein Sequence	MPPSLPAVQPGSMRQRSRGAWEASRRMEGAHLLDPLGLLGFPTAVGAGGQD
Nucleotide Sequence	TTGCCTCCCTCCCTGCCTGCTGTGCAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information