CircRNA Information

General Information
circRNA Basic Information
CircID chr19:35904443|35904590
Strand +
CircType exon
Host Gene ENSG00000011600.10;
Algorism CIRI2;
Sequence ACAGAGGCCGTATTACAAATGAGCCCGAATCATGACAGTCAGCAACATGATACCTGGATCCAGCCATTCCTGAAGCCCACCCTGCACCTCATTCCAACTCCTACCGCGATACAGACCCACAGAGTGCCATCCCTGAGAGACCAGACCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:35904443|35904590 hsa-miR-183-5p 0 0 1
chr19:35904443|35904590 hsa-miR-183-3p 0 0 1
chr19:35904443|35904590 hsa-miR-206 0 0 1
chr19:35904443|35904590 hsa-miR-433-5p 0 0 1
chr19:35904443|35904590 hsa-miR-433-3p 0 0 1
chr19:35904443|35904590 hsa-miR-571 0 0 1
chr19:35904443|35904590 hsa-miR-579-5p 0 0 1
chr19:35904443|35904590 hsa-miR-579-3p 0 0 1
chr19:35904443|35904590 hsa-miR-613 0 0 1
chr19:35904443|35904590 hsa-miR-541-5p 0 0 1
chr19:35904443|35904590 hsa-miR-541-3p 0 0 1
chr19:35904443|35904590 hsa-miR-873-5p 0 0 1
chr19:35904443|35904590 hsa-miR-873-3p 0 0 1
chr19:35904443|35904590 hsa-miR-943 0 0 1
chr19:35904443|35904590 hsa-miR-1287-5p 0 0 1
chr19:35904443|35904590 hsa-miR-1287-3p 0 0 1
chr19:35904443|35904590 hsa-miR-1266-5p 0 0 1
chr19:35904443|35904590 hsa-miR-1266-3p 0 0 1
chr19:35904443|35904590 hsa-miR-193a-5p 1 0 1
chr19:35904443|35904590 hsa-miR-654-5p 1 1 1
chr19:35904443|35904590 hsa-miR-628-5p 0 0 1
chr19:35904443|35904590 hsa-miR-1 0 0 1
chr19:35904443|35904590 hsa-miR-608 1 0 0
chr19:35904443|35904590 hsa-miR-638 1 0 0
chr19:35904443|35904590 hsa-miR-658 1 0 0
chr19:35904443|35904590 hsa-miR-1205 1 0 0
chr19:35904443|35904590 hsa-miR-3141 1 0 0
chr19:35904443|35904590 hsa-miR-3197 1 0 0
chr19:35904443|35904590 hsa-miR-4296 1 0 0
chr19:35904443|35904590 hsa-miR-4322 1 0 0
chr19:35904443|35904590 hsa-miR-4259 1 0 0
chr19:35904443|35904590 hsa-miR-4265 1 0 0
chr19:35904443|35904590 hsa-miR-4466 1 0 0
chr19:35904443|35904590 hsa-miR-4505 1 0 0
chr19:35904443|35904590 hsa-miR-4507 1 0 0
chr19:35904443|35904590 hsa-miR-4518 1 1 0
chr19:35904443|35904590 hsa-miR-4525 1 0 0
chr19:35904443|35904590 hsa-miR-4533 1 0 0
chr19:35904443|35904590 hsa-miR-1587 1 0 0
chr19:35904443|35904590 hsa-miR-4648 1 0 0
chr19:35904443|35904590 hsa-miR-4651 1 0 0
chr19:35904443|35904590 hsa-miR-4656 1 0 0
chr19:35904443|35904590 hsa-miR-4674 1 0 0
chr19:35904443|35904590 hsa-miR-4706 1 0 0
chr19:35904443|35904590 hsa-miR-4741 1 0 0
chr19:35904443|35904590 hsa-miR-5194 1 0 0
chr19:35904443|35904590 hsa-miR-5572 1 0 0
chr19:35904443|35904590 hsa-miR-5705 1 0 0
chr19:35904443|35904590 hsa-miR-6086 1 0 0
chr19:35904443|35904590 hsa-miR-6127 1 0 0
chr19:35904443|35904590 hsa-miR-6129 1 0 0
chr19:35904443|35904590 hsa-miR-6132 1 0 0
chr19:35904443|35904590 hsa-miR-6745 1 0 0
chr19:35904443|35904590 hsa-miR-8052 1 0 0
chr19:35904443|35904590 hsa-miR-8072 1 0 0
chr19:35904443|35904590 hsa-miR-8075 1 0 0
chr19:35904443|35904590 hsa-miR-12114 1 0 0
chr19:35904443|35904590 hsa-miR-12119 1 0 0
chr19:35904443|35904590 hsa-miR-12128 1 1 0
chr19:35904443|35904590 hsa-miR-211-3p 1 0 0
chr19:35904443|35904590 hsa-miR-4433b-3p 1 0 0
chr19:35904443|35904590 hsa-miR-504-3p 1 0 0
chr19:35904443|35904590 hsa-miR-7106-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6799-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6728-5p 1 0 0
chr19:35904443|35904590 hsa-miR-8071 1 0 0
chr19:35904443|35904590 hsa-miR-5187-5p 1 0 0
chr19:35904443|35904590 hsa-miR-7114-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6757-5p 1 1 0
chr19:35904443|35904590 hsa-miR-6880-5p 1 0 0
chr19:35904443|35904590 hsa-miR-4653-3p 1 0 0
chr19:35904443|35904590 hsa-miR-3064-5p 0 1 0
chr19:35904443|35904590 hsa-miR-4474-3p 1 0 0
chr19:35904443|35904590 hsa-miR-6721-5p 1 0 0
chr19:35904443|35904590 hsa-miR-432-5p 1 0 0
chr19:35904443|35904590 hsa-miR-3663-5p 1 1 0
chr19:35904443|35904590 hsa-miR-6871-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6748-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6793-5p 1 1 0
chr19:35904443|35904590 hsa-miR-6796-5p 1 0 0
chr19:35904443|35904590 hsa-miR-185-3p 1 0 0
chr19:35904443|35904590 hsa-miR-6732-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6782-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6821-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6786-5p 1 0 0
chr19:35904443|35904590 hsa-miR-3944-3p 1 0 0
chr19:35904443|35904590 hsa-miR-296-3p 1 0 0
chr19:35904443|35904590 hsa-miR-6823-5p 1 0 0
chr19:35904443|35904590 hsa-miR-889-5p 1 1 0
chr19:35904443|35904590 hsa-miR-4446-3p 1 0 0
chr19:35904443|35904590 hsa-miR-202-3p 1 0 0
chr19:35904443|35904590 hsa-miR-106b-3p 1 0 0
chr19:35904443|35904590 hsa-miR-6895-3p 0 1 0
chr19:35904443|35904590 hsa-miR-1233-5p 1 0 0
chr19:35904443|35904590 hsa-miR-4763-3p 1 0 0
chr19:35904443|35904590 hsa-miR-6769b-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6778-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6812-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6816-5p 1 0 0
chr19:35904443|35904590 hsa-miR-5001-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6726-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6743-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6754-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6756-5p 1 1 0
chr19:35904443|35904590 hsa-miR-6769a-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6813-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6819-5p 1 0 0
chr19:35904443|35904590 hsa-miR-1249-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6722-3p 1 0 0
chr19:35904443|35904590 hsa-miR-3620-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6836-5p 1 0 0
chr19:35904443|35904590 hsa-miR-1909-3p 1 0 0
chr19:35904443|35904590 hsa-miR-328-5p 1 0 0
chr19:35904443|35904590 hsa-miR-4725-3p 1 0 0
chr19:35904443|35904590 hsa-miR-675-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6511b-5p 1 0 0
chr19:35904443|35904590 hsa-miR-3940-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6766-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6785-5p 1 0 0
chr19:35904443|35904590 hsa-miR-6753-3p 1 0 0
chr19:35904443|35904590 hsa-miR-4757-5p 0 1 0
chr19:35904443|35904590 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:35904443|35904590
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MSPNHDSQQHDTWIQPFLKPTLHLIPTPTAIQTHRVPSLRDQT
Nucleotide Sequence ATGAGCCCGAATCATGACAGTCAGCAACATGATACCTGGATCCAGCCATTCCTGAAGCCCACCCTGCACCTCATTCCAACTCCTACCGCGATACAGACCCACAGAGTGCCATCCCTGAGAGACCAGACC

CircID chr19:35904443|35904590
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MDPAIPEAHPAPHSNSYRDTDPQSAIPERPD
Nucleotide Sequence CTGGATCCAGCCATTCCTGAAGCCCACCCTGCACCTCATTCCAACTCCTACCGCGATACAGACCCACAGAGTGCCATCCCTGAGAGACCAGAC

CircID chr19:35904443|35904590
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MVSQGWHSVGLYRGRSWNEVQGGLQEWLDPGIMLLTVMIRAHL
Nucleotide Sequence CTGGTCTCTCAGGGATGGCACTCTGTGGGTCTGTATCGCGGTAGGAGTTGGAATGAGGTGCAGGGTGGGCTTCAGGAATGGCTGGATCCAGGTATCATGTTGCTGACTGTCATGATTCGGGCTCATTTGTAA

CircID chr19:35904443|35904590
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MWVCIAVGVGMRCRVGFRNGWIQVSCC
Nucleotide Sequence CTGTGGGTCTGTATCGCGGTAGGAGTTGGAATGAGGTGCAGGGTGGGCTTCAGGAATGGCTGGATCCAGGTATCATGTTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites