CircRNA Information

General Information
circRNA Basic Information
CircID chr19:35907218|35907541
Strand -
CircType exon
Host Gene ENSG00000011600.10;
Algorism CIRI2;
Sequence CTGATAAGGCGACTCGGTCTCAGTGATACGCTGTTTCCGGGTCGCTGCTGGAGGTGAGGGGTGTTGTGGGGTGCAGAGACAGGCAGAGTGGTGAGTTGAGGGTGTTTTGTCATTCCAAATCAGCACCTCCATTACCATCCCTTTGGATGTTTGAGATCTGGGAGTTTACCCAGCCCCCCACCCCCATCTAGGCAAGTCCTCAGGATGTCCCCTGCTAGCCCCACTCACCCTCCGCAGCCCCTCGCCCCCGAGGGACCAGCCGGCCCAGGAAGTACACGGCCAGGGCAATGAGCACTGTCAGCACCAGGTCTCCCATCACGATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:35907218|35907541 hsa-miR-197-5p 0 0 1
chr19:35907218|35907541 hsa-miR-197-3p 0 0 1
chr19:35907218|35907541 hsa-miR-206 0 0 1
chr19:35907218|35907541 hsa-miR-503-5p 0 0 1
chr19:35907218|35907541 hsa-miR-503-3p 0 0 1
chr19:35907218|35907541 hsa-miR-555 0 0 1
chr19:35907218|35907541 hsa-miR-593-5p 0 0 1
chr19:35907218|35907541 hsa-miR-593-3p 0 0 1
chr19:35907218|35907541 hsa-miR-604 1 1 1
chr19:35907218|35907541 hsa-miR-608 1 1 1
chr19:35907218|35907541 hsa-miR-613 0 0 1
chr19:35907218|35907541 hsa-miR-621 0 0 1
chr19:35907218|35907541 hsa-miR-631 0 1 1
chr19:35907218|35907541 hsa-miR-658 1 1 1
chr19:35907218|35907541 hsa-miR-766-5p 0 0 1
chr19:35907218|35907541 hsa-miR-766-3p 0 0 1
chr19:35907218|35907541 hsa-miR-874-5p 0 0 1
chr19:35907218|35907541 hsa-miR-874-3p 0 0 1
chr19:35907218|35907541 hsa-miR-1200 0 0 1
chr19:35907218|35907541 hsa-miR-769-5p 1 1 1
chr19:35907218|35907541 hsa-miR-1224-5p 1 0 1
chr19:35907218|35907541 hsa-miR-361-5p 0 0 1
chr19:35907218|35907541 hsa-miR-146b-3p 0 0 1
chr19:35907218|35907541 hsa-miR-423-5p 0 1 1
chr19:35907218|35907541 hsa-miR-628-5p 0 0 1
chr19:35907218|35907541 hsa-miR-34c-3p 0 0 1
chr19:35907218|35907541 hsa-miR-338-3p 0 0 1
chr19:35907218|35907541 hsa-miR-220b 0 0 1
chr19:35907218|35907541 hsa-miR-371-5p 0 0 1
chr19:35907218|35907541 hsa-miR-1 0 0 1
chr19:35907218|35907541 hsa-miR-449a 1 0 0
chr19:35907218|35907541 hsa-miR-623 1 0 0
chr19:35907218|35907541 hsa-miR-637 1 0 0
chr19:35907218|35907541 hsa-miR-663a 1 0 0
chr19:35907218|35907541 hsa-miR-762 1 1 0
chr19:35907218|35907541 hsa-miR-760 1 0 0
chr19:35907218|35907541 hsa-miR-1268a 1 0 0
chr19:35907218|35907541 hsa-miR-1275 1 0 0
chr19:35907218|35907541 hsa-miR-1470 1 0 0
chr19:35907218|35907541 hsa-miR-2861 1 0 0
chr19:35907218|35907541 hsa-miR-3131 1 0 0
chr19:35907218|35907541 hsa-miR-544b 0 1 0
chr19:35907218|35907541 hsa-miR-3141 1 0 0
chr19:35907218|35907541 hsa-miR-3154 1 0 0
chr19:35907218|35907541 hsa-miR-3188 1 0 0
chr19:35907218|35907541 hsa-miR-3196 1 0 0
chr19:35907218|35907541 hsa-miR-4327 1 0 0
chr19:35907218|35907541 hsa-miR-4281 1 0 0
chr19:35907218|35907541 hsa-miR-4292 1 0 0
chr19:35907218|35907541 hsa-miR-4329 0 1 0
chr19:35907218|35907541 hsa-miR-3661 1 1 0
chr19:35907218|35907541 hsa-miR-1268b 1 0 0
chr19:35907218|35907541 hsa-miR-4420 0 1 0
chr19:35907218|35907541 hsa-miR-4440 1 0 0
chr19:35907218|35907541 hsa-miR-4466 1 0 0
chr19:35907218|35907541 hsa-miR-4467 1 0 0
chr19:35907218|35907541 hsa-miR-4481 1 1 0
chr19:35907218|35907541 hsa-miR-4488 1 1 0
chr19:35907218|35907541 hsa-miR-4489 1 0 0
chr19:35907218|35907541 hsa-miR-4498 1 1 0
chr19:35907218|35907541 hsa-miR-2392 1 0 0
chr19:35907218|35907541 hsa-miR-4507 1 0 0
chr19:35907218|35907541 hsa-miR-4526 0 1 0
chr19:35907218|35907541 hsa-miR-4530 0 1 0
chr19:35907218|35907541 hsa-miR-4534 1 0 0
chr19:35907218|35907541 hsa-miR-1587 1 0 0
chr19:35907218|35907541 hsa-miR-4651 1 1 0
chr19:35907218|35907541 hsa-miR-4656 1 0 0
chr19:35907218|35907541 hsa-miR-4675 1 0 0
chr19:35907218|35907541 hsa-miR-4683 1 0 0
chr19:35907218|35907541 hsa-miR-4688 1 0 0
chr19:35907218|35907541 hsa-miR-4689 1 0 0
chr19:35907218|35907541 hsa-miR-4706 1 0 0
chr19:35907218|35907541 hsa-miR-4721 1 0 0
chr19:35907218|35907541 hsa-miR-4734 1 0 0
chr19:35907218|35907541 hsa-miR-4741 1 0 0
chr19:35907218|35907541 hsa-miR-4754 1 0 0
chr19:35907218|35907541 hsa-miR-5194 1 0 0
chr19:35907218|35907541 hsa-miR-5572 1 0 0
chr19:35907218|35907541 hsa-miR-5787 1 0 0
chr19:35907218|35907541 hsa-miR-6085 1 1 0
chr19:35907218|35907541 hsa-miR-6090 1 0 0
chr19:35907218|35907541 hsa-miR-6132 1 0 0
chr19:35907218|35907541 hsa-miR-7974 1 1 0
chr19:35907218|35907541 hsa-miR-8072 1 0 0
chr19:35907218|35907541 hsa-miR-8077 1 0 0
chr19:35907218|35907541 hsa-miR-8089 1 1 0
chr19:35907218|35907541 hsa-miR-1843 0 1 0
chr19:35907218|35907541 hsa-miR-12114 1 0 0
chr19:35907218|35907541 hsa-miR-6734-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6747-3p 0 1 0
chr19:35907218|35907541 hsa-miR-6747-5p 1 0 0
chr19:35907218|35907541 hsa-miR-4687-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6799-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6510-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6804-5p 1 0 0
chr19:35907218|35907541 hsa-miR-139-3p 1 0 0
chr19:35907218|35907541 hsa-miR-7114-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6515-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6089 1 0 0
chr19:35907218|35907541 hsa-miR-6757-5p 0 1 0
chr19:35907218|35907541 hsa-miR-6880-5p 1 0 0
chr19:35907218|35907541 hsa-miR-7847-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6727-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6721-5p 1 0 0
chr19:35907218|35907541 hsa-miR-433-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6871-5p 1 1 0
chr19:35907218|35907541 hsa-miR-3180-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6748-5p 1 0 0
chr19:35907218|35907541 hsa-miR-185-3p 1 1 0
chr19:35907218|35907541 hsa-miR-6829-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6732-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6805-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6798-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6881-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6782-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6850-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6788-3p 1 0 0
chr19:35907218|35907541 hsa-miR-1343-3p 0 1 0
chr19:35907218|35907541 hsa-miR-6786-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6835-5p 1 0 0
chr19:35907218|35907541 hsa-miR-939-3p 0 1 0
chr19:35907218|35907541 hsa-miR-7109-5p 1 0 0
chr19:35907218|35907541 hsa-miR-1226-5p 1 1 0
chr19:35907218|35907541 hsa-miR-1229-5p 1 0 0
chr19:35907218|35907541 hsa-miR-4640-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6803-3p 1 0 0
chr19:35907218|35907541 hsa-miR-30c-2-3p 1 1 0
chr19:35907218|35907541 hsa-miR-6514-3p 0 1 0
chr19:35907218|35907541 hsa-miR-5001-3p 0 1 0
chr19:35907218|35907541 hsa-miR-885-3p 1 0 0
chr19:35907218|35907541 hsa-miR-619-3p 1 0 0
chr19:35907218|35907541 hsa-miR-1228-5p 1 0 0
chr19:35907218|35907541 hsa-miR-296-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6818-3p 0 1 0
chr19:35907218|35907541 hsa-miR-4787-5p 1 0 0
chr19:35907218|35907541 hsa-miR-5196-3p 1 0 0
chr19:35907218|35907541 hsa-miR-4446-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6789-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6781-5p 1 0 0
chr19:35907218|35907541 hsa-miR-194-3p 1 0 0
chr19:35907218|35907541 hsa-miR-664b-5p 1 0 0
chr19:35907218|35907541 hsa-miR-3191-3p 1 0 0
chr19:35907218|35907541 hsa-miR-4727-3p 1 0 0
chr19:35907218|35907541 hsa-miR-744-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6871-3p 1 1 0
chr19:35907218|35907541 hsa-miR-7848-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6865-3p 1 1 0
chr19:35907218|35907541 hsa-miR-34a-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6792-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6738-3p 0 1 0
chr19:35907218|35907541 hsa-miR-4649-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6777-3p 1 1 0
chr19:35907218|35907541 hsa-miR-1296-3p 0 1 0
chr19:35907218|35907541 hsa-miR-3670 1 0 0
chr19:35907218|35907541 hsa-miR-3620-3p 1 0 0
chr19:35907218|35907541 hsa-miR-1229-3p 1 0 0
chr19:35907218|35907541 hsa-miR-4639-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6750-3p 1 1 0
chr19:35907218|35907541 hsa-miR-5003-5p 0 1 0
chr19:35907218|35907541 hsa-miR-10400-5p 1 0 0
chr19:35907218|35907541 hsa-miR-1207-5p 1 0 0
chr19:35907218|35907541 hsa-miR-1233-5p 1 0 0
chr19:35907218|35907541 hsa-miR-1273h-5p 1 0 0
chr19:35907218|35907541 hsa-miR-4763-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6769b-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6778-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6787-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6812-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6816-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6870-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6775-5p 1 0 0
chr19:35907218|35907541 hsa-miR-3180 1 0 0
chr19:35907218|35907541 hsa-miR-5001-5p 0 1 0
chr19:35907218|35907541 hsa-miR-6726-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6737-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6743-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6752-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6756-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6803-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6813-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6819-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6842-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6851-5p 1 0 0
chr19:35907218|35907541 hsa-miR-7110-5p 1 1 0
chr19:35907218|35907541 hsa-miR-1249-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6722-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6751-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6774-5p 0 1 0
chr19:35907218|35907541 hsa-miR-6779-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6797-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6754-3p 1 0 0
chr19:35907218|35907541 hsa-miR-3620-5p 1 0 0
chr19:35907218|35907541 hsa-miR-10396a-5p 1 0 0
chr19:35907218|35907541 hsa-miR-10396b-5p 1 0 0
chr19:35907218|35907541 hsa-miR-1237-5p 1 1 0
chr19:35907218|35907541 hsa-miR-328-5p 1 1 0
chr19:35907218|35907541 hsa-miR-4649-5p 1 1 0
chr19:35907218|35907541 hsa-miR-4745-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6729-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6738-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6794-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6795-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6846-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6848-5p 1 1 0
chr19:35907218|35907541 hsa-miR-6858-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6883-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6887-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6885-5p 0 1 0
chr19:35907218|35907541 hsa-miR-939-5p 1 0 0
chr19:35907218|35907541 hsa-miR-4758-5p 1 1 0
chr19:35907218|35907541 hsa-miR-365a-5p 1 0 0
chr19:35907218|35907541 hsa-miR-3940-5p 1 0 0
chr19:35907218|35907541 hsa-miR-30c-1-3p 1 1 0
chr19:35907218|35907541 hsa-miR-6736-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6855-5p 1 0 0
chr19:35907218|35907541 hsa-miR-3679-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6766-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6785-5p 1 0 0
chr19:35907218|35907541 hsa-miR-3689d 0 1 0
chr19:35907218|35907541 hsa-miR-6790-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6724-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6791-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6753-3p 1 0 0
chr19:35907218|35907541 hsa-miR-6511a-3p 1 1 0
chr19:35907218|35907541 hsa-miR-483-3p 0 1 0
chr19:35907218|35907541 hsa-miR-6511b-3p 1 1 0
chr19:35907218|35907541 hsa-miR-4756-5p 1 0 0
chr19:35907218|35907541 hsa-miR-6783-3p 0 1 0
chr19:35907218|35907541 hsa-miR-1912-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:35907218|35907541
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MRSGSLPSPPPPSRQVLRMSPASPTHPPQPLAPEGPAGPGSTRPGQ
Nucleotide Sequence TTGAGATCTGGGAGTTTACCCAGCCCCCCACCCCCATCTAGGCAAGTCCTCAGGATGTCCCCTGCTAGCCCCACTCACCCTCCGCAGCCCCTCGCCCCCGAGGGACCAGCCGGCCCAGGAAGTACACGGCCAGGGCAATGA

CircID chr19:35907218|35907541
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MGVYPAPHPHLGKSSGCPLLAPLTLRSPSPPRDQPAQEVHGQGNEHCQHQVSHHD
Nucleotide Sequence CTGGGAGTTTACCCAGCCCCCCACCCCCATCTAGGCAAGTCCTCAGGATGTCCCCTGCTAGCCCCACTCACCCTCCGCAGCCCCTCGCCCCCGAGGGACCAGCCGGCCCAGGAAGTACACGGCCAGGGCAATGAGCACTGTCAGCACCAGGTCTCCCATCACGAT

CircID chr19:35907218|35907541
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MLEVRGVVGCRDRQSGELRVFCHSKSAPPLPSLWMFEIWEFTQPPTPI
Nucleotide Sequence CTGCTGGAGGTGAGGGGTGTTGTGGGGTGCAGAGACAGGCAGAGTGGTGAGTTGAGGGTGTTTTGTCATTCCAAATCAGCACCTCCATTACCATCCCTTTGGATGTTTGAGATCTGGGAGTTTACCCAGCCCCCCACCCCCATCTAG

CircID chr19:35907218|35907541
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MPWPCTSWAGWSLGGEGLRRVSGASRGHPEDLPRWGWGAG
Nucleotide Sequence TTGCCCTGGCCGTGTACTTCCTGGGCCGGCTGGTCCCTCGGGGGCGAGGGGCTGCGGAGGGTGAGTGGGGCTAGCAGGGGACATCCTGAGGACTTGCCTAGATGGGGGTGGGGGGCTGGGTAA

CircID chr19:35907218|35907541
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MVMEVLIWNDKTPSTHHSACLCTPQHPSPPAATRKQRITETESPYQ
Nucleotide Sequence ATGGTAATGGAGGTGCTGATTTGGAATGACAAAACACCCTCAACTCACCACTCTGCCTGTCTCTGCACCCCACAACACCCCTCACCTCCAGCAGCGACCCGGAAACAGCGTATCACTGAGACCGAGTCGCCTTATCAG

CircID chr19:35907218|35907541
ORF Type ORF6
Protein Length 37
Nucleotide Length 111
Protein Sequence MTKHPQLTTLPVSAPHNTPHLQQRPGNSVSLRPSRLI
Nucleotide Sequence ATGACAAAACACCCTCAACTCACCACTCTGCCTGTCTCTGCACCCCACAACACCCCTCACCTCCAGCAGCGACCCGGAAACAGCGTATCACTGAGACCGAGTCGCCTTATC

CircID chr19:35907218|35907541
ORF Type ORF7
Protein Length 33
Nucleotide Length 102
Protein Sequence MGDLVLTVLIALAVYFLGRLVPRGRGAAEGEWG
Nucleotide Sequence ATGGGAGACCTGGTGCTGACAGTGCTCATTGCCCTGGCCGTGTACTTCCTGGGCCGGCTGGTCCCTCGGGGGCGAGGGGCTGCGGAGGGTGAGTGGGGCTAG

CircID chr19:35907218|35907541
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MGVGGWVNSQISNIQRDGNGGADLE
Nucleotide Sequence ATGGGGGTGGGGGGCTGGGTAAACTCCCAGATCTCAAACATCCAAAGGGATGGTAATGGAGGTGCTGATTTGGAATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites