CircRNA Information

General Information
circRNA Basic Information
CircID chr19:3641633|3641796
Strand -
CircType exon
Host Gene ENSG00000186111.7;
Algorism CIRI2;
Sequence CTCGGGGTGCTCTTGGCTCCTCTGGGCCCGCAGCAGGTGGGCGCCCCGACCTCCCGCCGAGGCCGTGCTCACCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTGCACTGTAATCTGCTGCAGATCCTCTTCCGCGGGTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:3641633|3641796 hsa-miR-107 0 0 1
chr19:3641633|3641796 hsa-miR-148a-5p 0 0 1
chr19:3641633|3641796 hsa-miR-148a-3p 0 0 1
chr19:3641633|3641796 hsa-miR-152-5p 0 0 1
chr19:3641633|3641796 hsa-miR-152-3p 0 0 1
chr19:3641633|3641796 hsa-miR-370-5p 0 0 1
chr19:3641633|3641796 hsa-miR-370-3p 0 0 1
chr19:3641633|3641796 hsa-miR-148b-5p 0 0 1
chr19:3641633|3641796 hsa-miR-148b-3p 0 0 1
chr19:3641633|3641796 hsa-miR-335-5p 0 0 1
chr19:3641633|3641796 hsa-miR-335-3p 0 0 1
chr19:3641633|3641796 hsa-miR-583 0 0 1
chr19:3641633|3641796 hsa-miR-596 0 0 1
chr19:3641633|3641796 hsa-miR-620 0 0 1
chr19:3641633|3641796 hsa-miR-657 0 0 1
chr19:3641633|3641796 hsa-miR-922 0 0 1
chr19:3641633|3641796 hsa-miR-1205 0 0 1
chr19:3641633|3641796 hsa-miR-1270 0 0 1
chr19:3641633|3641796 hsa-miR-1307-5p 0 0 1
chr19:3641633|3641796 hsa-miR-1307-3p 0 0 1
chr19:3641633|3641796 hsa-miR-1184 0 0 1
chr19:3641633|3641796 hsa-miR-1224-3p 0 0 1
chr19:3641633|3641796 hsa-miR-582-5p 0 0 1
chr19:3641633|3641796 hsa-miR-103 0 0 1
chr19:3641633|3641796 hsa-miR-663a 1 0 0
chr19:3641633|3641796 hsa-miR-3154 1 0 0
chr19:3641633|3641796 hsa-miR-3188 1 0 0
chr19:3641633|3641796 hsa-miR-4281 1 0 0
chr19:3641633|3641796 hsa-miR-3911 1 0 0
chr19:3641633|3641796 hsa-miR-4479 1 0 0
chr19:3641633|3641796 hsa-miR-4656 1 0 0
chr19:3641633|3641796 hsa-miR-4734 1 0 0
chr19:3641633|3641796 hsa-miR-4739 1 0 0
chr19:3641633|3641796 hsa-miR-6071 1 0 0
chr19:3641633|3641796 hsa-miR-6125 1 0 0
chr19:3641633|3641796 hsa-miR-12115 1 0 0
chr19:3641633|3641796 hsa-miR-12118 1 0 0
chr19:3641633|3641796 hsa-miR-6825-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6894-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6804-5p 1 0 0
chr19:3641633|3641796 hsa-miR-7847-3p 1 0 0
chr19:3641633|3641796 hsa-miR-4695-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6776-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6798-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6782-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6821-5p 1 0 0
chr19:3641633|3641796 hsa-miR-5088-5p 1 0 0
chr19:3641633|3641796 hsa-miR-877-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6749-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6789-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6781-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6499-5p 1 0 0
chr19:3641633|3641796 hsa-miR-1343-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6756-5p 1 0 0
chr19:3641633|3641796 hsa-miR-7107-5p 1 0 0
chr19:3641633|3641796 hsa-miR-11181-3p 1 0 0
chr19:3641633|3641796 hsa-miR-6722-3p 1 0 0
chr19:3641633|3641796 hsa-miR-6836-5p 1 0 0
chr19:3641633|3641796 hsa-miR-1909-3p 1 0 0
chr19:3641633|3641796 hsa-miR-4726-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6794-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6858-5p 1 0 0
chr19:3641633|3641796 hsa-miR-939-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6731-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6856-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6773-5p 1 0 0
chr19:3641633|3641796 hsa-miR-4665-5p 1 0 0
chr19:3641633|3641796 hsa-miR-10398-3p 1 0 0
chr19:3641633|3641796 hsa-miR-3173-3p 1 0 0
chr19:3641633|3641796 hsa-miR-6891-5p 1 0 0
chr19:3641633|3641796 hsa-miR-3184-5p 1 0 0
chr19:3641633|3641796 hsa-miR-6724-5p 1 0 0
chr19:3641633|3641796 hsa-miR-3619-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:3641633|3641796
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MAPLGPQQVGAPTSRRGRAHPASSSLGTTISTLHAGSTCTVICCRSSSAG
Nucleotide Sequence TTGGCTCCTCTGGGCCCGCAGCAGGTGGGCGCCCCGACCTCCCGCCGAGGCCGTGCTCACCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTGCACTGTAATCTGCTGCAGATCCTCTTCCGCGGGT
CircID chr19:3641633|3641796
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MQQITVQVEPACSVEIVVPKEEDAG
Nucleotide Sequence CTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGTGA
CircID chr19:3641633|3641796
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MRAAWRLWSPKRRTQGEHGLGGRSGRPPAAGPEEPRAPR
Nucleotide Sequence CTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGTGAGCACGGCCTCGGCGGGAGGTCGGGGCGCCCACCTGCTGCGGGCCCAGAGGAGCCAAGAGCACCCCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab