CircRNA Information

General Information
circRNA Basic Information
CircID chr19:36489938|36490194
Strand +
CircType exon
Host Gene ENSG00000267309.1;
Algorism CIRI2;
Sequence CTCCCCCCATCAGGTCGCAGGTTCCTGGTCTACACCCCTTCTGCGTCCCCAACCACTTCTGAGTCTCACAACCTCTGGTCCCATAACCCCTCTGCACTAAGGAGCAATAAACAAAATTCACGCCCGAACAAAGAGGCCAAAACAGCAACCCAGGATGTTTGCGCCTGCGCACTCTGGGCGCACAGTACTCAGGCCGGCAGCCCAGCACCGGCTTATCTGTGAGAGCAATTAAGATGACTTTCGGAGGGTCCAACCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:36489938|36490194 hsa-miR-130a-5p 0 0 1
chr19:36489938|36490194 hsa-miR-130a-3p 0 0 1
chr19:36489938|36490194 hsa-miR-137-5p 0 0 1
chr19:36489938|36490194 hsa-miR-137-3p 0 0 1
chr19:36489938|36490194 hsa-miR-301a-5p 0 0 1
chr19:36489938|36490194 hsa-miR-301a-3p 0 0 1
chr19:36489938|36490194 hsa-miR-130b-5p 0 0 1
chr19:36489938|36490194 hsa-miR-130b-3p 0 0 1
chr19:36489938|36490194 hsa-miR-375-5p 0 0 1
chr19:36489938|36490194 hsa-miR-375-3p 0 0 1
chr19:36489938|36490194 hsa-miR-454-5p 0 0 1
chr19:36489938|36490194 hsa-miR-454-3p 0 0 1
chr19:36489938|36490194 hsa-miR-298 0 0 1
chr19:36489938|36490194 hsa-miR-892a 0 0 1
chr19:36489938|36490194 hsa-miR-873-5p 0 0 1
chr19:36489938|36490194 hsa-miR-873-3p 0 0 1
chr19:36489938|36490194 hsa-miR-301b-5p 0 0 1
chr19:36489938|36490194 hsa-miR-301b-3p 0 0 1
chr19:36489938|36490194 hsa-miR-933 0 1 1
chr19:36489938|36490194 hsa-miR-1234-3p 0 0 1
chr19:36489938|36490194 hsa-miR-1250-5p 0 0 1
chr19:36489938|36490194 hsa-miR-1250-3p 0 0 1
chr19:36489938|36490194 hsa-miR-302f 0 0 1
chr19:36489938|36490194 hsa-miR-1278 0 1 1
chr19:36489938|36490194 hsa-miR-1234 0 0 1
chr19:36489938|36490194 hsa-miR-140-5p 0 0 1
chr19:36489938|36490194 hsa-miR-342-3p 0 0 1
chr19:36489938|36490194 hsa-miR-1268 0 0 1
chr19:36489938|36490194 hsa-miR-198 1 0 0
chr19:36489938|36490194 hsa-miR-608 1 0 0
chr19:36489938|36490194 hsa-miR-612 1 0 0
chr19:36489938|36490194 hsa-miR-637 1 0 0
chr19:36489938|36490194 hsa-miR-661 1 0 0
chr19:36489938|36490194 hsa-miR-658 1 0 0
chr19:36489938|36490194 hsa-miR-762 1 0 0
chr19:36489938|36490194 hsa-miR-1268a 1 0 0
chr19:36489938|36490194 hsa-miR-3132 1 0 0
chr19:36489938|36490194 hsa-miR-3147 1 0 0
chr19:36489938|36490194 hsa-miR-3154 1 1 0
chr19:36489938|36490194 hsa-miR-3181 1 0 0
chr19:36489938|36490194 hsa-miR-4298 1 0 0
chr19:36489938|36490194 hsa-miR-4257 1 1 0
chr19:36489938|36490194 hsa-miR-4269 1 0 0
chr19:36489938|36490194 hsa-miR-3936 0 1 0
chr19:36489938|36490194 hsa-miR-1268b 1 0 0
chr19:36489938|36490194 hsa-miR-4448 1 1 0
chr19:36489938|36490194 hsa-miR-4462 1 0 0
chr19:36489938|36490194 hsa-miR-4486 1 0 0
chr19:36489938|36490194 hsa-miR-4498 1 0 0
chr19:36489938|36490194 hsa-miR-4505 1 0 0
chr19:36489938|36490194 hsa-miR-1587 0 1 0
chr19:36489938|36490194 hsa-miR-4656 1 0 0
chr19:36489938|36490194 hsa-miR-4675 1 0 0
chr19:36489938|36490194 hsa-miR-4741 1 0 0
chr19:36489938|36490194 hsa-miR-4767 1 0 0
chr19:36489938|36490194 hsa-miR-5194 1 1 0
chr19:36489938|36490194 hsa-miR-5572 1 0 0
chr19:36489938|36490194 hsa-miR-5787 1 0 0
chr19:36489938|36490194 hsa-miR-6086 1 1 0
chr19:36489938|36490194 hsa-miR-6134 1 0 0
chr19:36489938|36490194 hsa-miR-6165 1 0 0
chr19:36489938|36490194 hsa-miR-8089 1 0 0
chr19:36489938|36490194 hsa-miR-12125 0 1 0
chr19:36489938|36490194 hsa-miR-12127 0 1 0
chr19:36489938|36490194 hsa-miR-138-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4433b-3p 1 0 0
chr19:36489938|36490194 hsa-miR-4731-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6747-5p 1 1 0
chr19:36489938|36490194 hsa-miR-4433a-3p 1 0 0
chr19:36489938|36490194 hsa-miR-6894-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6857-5p 1 0 0
chr19:36489938|36490194 hsa-miR-5187-5p 1 0 0
chr19:36489938|36490194 hsa-miR-1227-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6089 1 0 0
chr19:36489938|36490194 hsa-miR-4722-5p 1 1 0
chr19:36489938|36490194 hsa-miR-197-5p 1 0 0
chr19:36489938|36490194 hsa-miR-8069 1 0 0
chr19:36489938|36490194 hsa-miR-5589-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6776-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6871-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6772-5p 1 1 0
chr19:36489938|36490194 hsa-miR-6805-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6798-5p 1 0 0
chr19:36489938|36490194 hsa-miR-2467-3p 1 1 0
chr19:36489938|36490194 hsa-miR-6782-5p 1 1 0
chr19:36489938|36490194 hsa-miR-6810-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6786-5p 1 0 0
chr19:36489938|36490194 hsa-miR-7109-5p 0 1 0
chr19:36489938|36490194 hsa-miR-6740-5p 1 0 0
chr19:36489938|36490194 hsa-miR-3944-3p 1 0 0
chr19:36489938|36490194 hsa-miR-193b-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4640-5p 1 0 0
chr19:36489938|36490194 hsa-miR-92b-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6749-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6847-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6834-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6789-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6742-3p 1 1 0
chr19:36489938|36490194 hsa-miR-6892-5p 1 0 0
chr19:36489938|36490194 hsa-miR-7160-3p 1 0 0
chr19:36489938|36490194 hsa-miR-3678-3p 1 1 0
chr19:36489938|36490194 hsa-miR-423-5p 1 0 0
chr19:36489938|36490194 hsa-miR-3191-3p 1 1 0
chr19:36489938|36490194 hsa-miR-1225-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4746-3p 1 0 0
chr19:36489938|36490194 hsa-miR-4750-5p 1 0 0
chr19:36489938|36490194 hsa-miR-3179 0 1 0
chr19:36489938|36490194 hsa-miR-652-3p 1 0 0
chr19:36489938|36490194 hsa-miR-4763-3p 1 0 0
chr19:36489938|36490194 hsa-miR-6769b-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6752-5p 1 1 0
chr19:36489938|36490194 hsa-miR-6756-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6803-5p 1 0 0
chr19:36489938|36490194 hsa-miR-7107-5p 0 1 0
chr19:36489938|36490194 hsa-miR-7110-5p 1 0 0
chr19:36489938|36490194 hsa-miR-10401-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6722-3p 1 0 0
chr19:36489938|36490194 hsa-miR-6751-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6763-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6875-5p 1 0 0
chr19:36489938|36490194 hsa-miR-3620-5p 1 1 0
chr19:36489938|36490194 hsa-miR-10392-5p 1 0 0
chr19:36489938|36490194 hsa-miR-1237-5p 1 0 0
chr19:36489938|36490194 hsa-miR-328-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4685-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4726-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6738-5p 1 1 0
chr19:36489938|36490194 hsa-miR-6858-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4697-5p 1 0 0
chr19:36489938|36490194 hsa-miR-6845-5p 1 0 0
chr19:36489938|36490194 hsa-miR-10394-3p 1 0 0
chr19:36489938|36490194 hsa-miR-6511a-5p 1 0 0
chr19:36489938|36490194 hsa-miR-1914-3p 1 0 0
chr19:36489938|36490194 hsa-miR-4665-5p 1 0 0
chr19:36489938|36490194 hsa-miR-4667-5p 0 1 0
chr19:36489938|36490194 hsa-miR-10400-3p 1 0 0
chr19:36489938|36490194 hsa-miR-6744-3p 0 1 0
chr19:36489938|36490194 hsa-miR-323b-5p 1 0 0
chr19:36489938|36490194 hsa-miR-30a-5p 0 1 0
chr19:36489938|36490194 hsa-miR-30e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:36489938|36490194
ORF Type ORF1
Protein Length 65
Nucleotide Length 198
Protein Sequence MVYTPSASPTTSESHNLWSHNPSALRSNKQNSRPNKEAKTATQDVCACALWAHSTQAGSPAPAYL
Nucleotide Sequence CTGGTCTACACCCCTTCTGCGTCCCCAACCACTTCTGAGTCTCACAACCTCTGGTCCCATAACCCCTCTGCACTAAGGAGCAATAAACAAAATTCACGCCCGAACAAAGAGGCCAAAACAGCAACCCAGGATGTTTGCGCCTGCGCACTCTGGGCGCACAGTACTCAGGCCGGCAGCCCAGCACCGGCTTATCTGTGA
CircID chr19:36489938|36490194
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MFAPAHSGRTVLRPAAQHRLICESN
Nucleotide Sequence ATGTTTGCGCCTGCGCACTCTGGGCGCACAGTACTCAGGCCGGCAGCCCAGCACCGGCTTATCTGTGAGAGCAATTAA
CircID chr19:36489938|36490194
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MRLRTLGAQYSGRQPSTGLSVRAIKMTFGGSNR
Nucleotide Sequence TTGCGCCTGCGCACTCTGGGCGCACAGTACTCAGGCCGGCAGCCCAGCACCGGCTTATCTGTGAGAGCAATTAAGATGACTTTCGGAGGGTCCAACCGC
CircID chr19:36489938|36490194
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MCAQSAQAQTSWVAVLASLFGREFCLLLLSAEGLWDQRL
Nucleotide Sequence CTGTGCGCCCAGAGTGCGCAGGCGCAAACATCCTGGGTTGCTGTTTTGGCCTCTTTGTTCGGGCGTGAATTTTGTTTATTGCTCCTTAGTGCAGAGGGGTTATGGGACCAGAGGTTGTGA
CircID chr19:36489938|36490194
ORF Type ORF5
Protein Length 84
Nucleotide Length 252
Protein Sequence MDPPKVILIALTDKPVLGCRPEYCAPRVRRRKHPGLLFWPLCSGVNFVYCSLVQRGYGTRGCETQKWLGTQKGCRPGTCDLMGG
Nucleotide Sequence TTGGACCCTCCGAAAGTCATCTTAATTGCTCTCACAGATAAGCCGGTGCTGGGCTGCCGGCCTGAGTACTGTGCGCCCAGAGTGCGCAGGCGCAAACATCCTGGGTTGCTGTTTTGGCCTCTTTGTTCGGGCGTGAATTTTGTTTATTGCTCCTTAGTGCAGAGGGGTTATGGGACCAGAGGTTGTGAGACTCAGAAGTGGTTGGGGACGCAGAAGGGGTGTAGACCAGGAACCTGCGACCTGATGGGGGGA
CircID chr19:36489938|36490194
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MLSQISRCWAAGLSTVRPECAGANILGCCFGLFVRA
Nucleotide Sequence TTGCTCTCACAGATAAGCCGGTGCTGGGCTGCCGGCCTGAGTACTGTGCGCCCAGAGTGCGCAGGCGCAAACATCCTGGGTTGCTGTTTTGGCCTCTTTGTTCGGGCGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab