CircNet

General Information

circRNA Basic Information

CircID	chr19:3708403\|3708526
Strand	-
CircType	exon
Host Gene	ENSG00000105289.13;
Algorism	CIRI2;
Sequence	CTGCCTCCCTGTTGCCACCACAAGAGAGGAAAAGTTGGTCAAACAGGTGGGGAGGCCAGAGCTACAAGCCTCGGGTTCCCTCCCCACCACCCGTGCCAGGCAGGCACCCGGGCCCTGGCACCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:3708403\|3708526	hsa-miR-564	0	0	1
chr19:3708403\|3708526	hsa-miR-581	0	0	1
chr19:3708403\|3708526	hsa-miR-650	0	0	1
chr19:3708403\|3708526	hsa-miR-661	1	1	1
chr19:3708403\|3708526	hsa-miR-541-5p	0	0	1
chr19:3708403\|3708526	hsa-miR-541-3p	0	0	1
chr19:3708403\|3708526	hsa-miR-939-5p	0	0	1
chr19:3708403\|3708526	hsa-miR-939-3p	0	0	1
chr19:3708403\|3708526	hsa-miR-1238-5p	0	0	1
chr19:3708403\|3708526	hsa-miR-1238-3p	0	0	1
chr19:3708403\|3708526	hsa-miR-1293	0	1	1
chr19:3708403\|3708526	hsa-miR-1321	0	0	1
chr19:3708403\|3708526	hsa-miR-1827	0	0	1
chr19:3708403\|3708526	hsa-miR-491-5p	0	0	1
chr19:3708403\|3708526	hsa-miR-654-5p	0	0	1
chr19:3708403\|3708526	hsa-miR-1224-3p	0	0	1
chr19:3708403\|3708526	hsa-miR-550	0	0	1
chr19:3708403\|3708526	hsa-miR-1254	0	0	1
chr19:3708403\|3708526	hsa-miR-1538	0	1	0
chr19:3708403\|3708526	hsa-miR-3183	0	1	0
chr19:3708403\|3708526	hsa-miR-4270	0	1	0
chr19:3708403\|3708526	hsa-miR-4739	0	1	0
chr19:3708403\|3708526	hsa-miR-5087	0	1	0
chr19:3708403\|3708526	hsa-miR-3150a-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-6796-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-5006-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-4640-5p	1	0	0
chr19:3708403\|3708526	hsa-miR-6749-5p	1	0	0
chr19:3708403\|3708526	hsa-miR-149-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-7160-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-4758-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-6754-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-6763-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-6797-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-4728-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-1909-3p	1	0	0
chr19:3708403\|3708526	hsa-miR-4685-5p	1	1	0
chr19:3708403\|3708526	hsa-miR-4745-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-3085-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-1271-3p	0	1	0
chr19:3708403\|3708526	hsa-miR-6724-5p	1	0	0
chr19:3708403\|3708526	hsa-miR-6822-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-3059-5p	0	1	0
chr19:3708403\|3708526	hsa-miR-6824-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:3708403\|3708526
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	LPPCCHHKRGKVGQTGGEARATSLGFPPHHPCQAGTRALAP
Nucleotide Sequence	CTGCCTCCCTGTTGCCACCACAAGAGAGGAAAAGTTGGTCAAACAGGTGGGGAGGCCAGAGCTACAAGCCTCGGGTTCCCTCCCCACCACCCGTGCCAGGCAGGCACCCGGGCCCTGGCACCT

CircID	chr19:3708403\|3708526
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MVKQVGRPELQASGSLPTTRARQAPGPWHL
Nucleotide Sequence	TTGGTCAAACAGGTGGGGAGGCCAGAGCTACAAGCCTCGGGTTCCCTCCCCACCACCCGTGCCAGGCAGGCACCCGGGCCCTGGCACCTG

CircID	chr19:3708403\|3708526
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MLPPQERKSWSNRWGGQSYKPRVPSPPPVPGRHPGPGT
Nucleotide Sequence	CTGTTGCCACCACAAGAGAGGAAAAGTTGGTCAAACAGGTGGGGAGGCCAGAGCTACAAGCCTCGGGTTCCCTCCCCACCACCCGTGCCAGGCAGGCACCCGGGCCCTGGCACC

CircID	chr19:3708403\|3708526
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MARVVGREPEACSSGLPTCLTNFSSLVVATGRQ
Nucleotide Sequence	CTGGCACGGGTGGTGGGGAGGGAACCCGAGGCTTGTAGCTCTGGCCTCCCCACCTGTTTGACCAACTTTTCCTCTCTTGTGGTGGCAACAGGGAGGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information