CircNet

General Information

circRNA Basic Information

CircID	chr19:3730028\|3732038
Strand	+
CircType	exon
Host Gene	ENSG00000105289.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GACAGGCGACCACATCGTCATGGTGAACGGGGTTTCCATGGAGAATGCCACCTCCGCGTTTGCCATTCAGATACTCAAGACCTGCACCAAGATGGCCAACATCAGTTTGGCGTCAAGCTGGGCAGTCAGATCTTCATCAAGCACATTACAGATTCGGGCCTGGCTGCCCGGCACCGTGGGCTGCAGGAAGGAGATCTCATTCTACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:3730028\|3732038
ORF Type	ORF1
Protein Length	62
Nucleotide Length	186
Protein Sequence	MVNGVSMENATSAFAIQILKTCTKMANISLASSWAVRSSSSTLQIRAWLPGTVGCRKEISFY
Nucleotide Sequence	ATGGTGAACGGGGTTTCCATGGAGAATGCCACCTCCGCGTTTGCCATTCAGATACTCAAGACCTGCACCAAGATGGCCAACATCAGTTTGGCGTCAAGCTGGGCAGTCAGATCTTCATCAAGCACATTACAGATTCGGGCCTGGCTGCCCGGCACCGTGGGCTGCAGGAAGGAGATCTCATTCTAC

CircID	chr19:3730028\|3732038
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MPPPRLPFRYSRPAPRWPTSVWRQAGQSDLHQAHYRFGPGCPAPWAAGRRSHST
Nucleotide Sequence	ATGCCACCTCCGCGTTTGCCATTCAGATACTCAAGACCTGCACCAAGATGGCCAACATCAGTTTGGCGTCAAGCTGGGCAGTCAGATCTTCATCAAGCACATTACAGATTCGGGCCTGGCTGCCCGGCACCGTGGGCTGCAGGAAGGAGATCTCATTCTACA

CircID	chr19:3730028\|3732038
ORF Type	ORF3
Protein Length	69
Nucleotide Length	207
Protein Sequence	DRRPHRHGERGFHGECHLRVCHSDTQDLHQDGQHQFGVKLGSQIFIKHITDSGLAARHRGLQEGDLILQ
Nucleotide Sequence	GACAGGCGACCACATCGTCATGGTGAACGGGGTTTCCATGGAGAATGCCACCTCCGCGTTTGCCATTCAGATACTCAAGACCTGCACCAAGATGGCCAACATCAGTTTGGCGTCAAGCTGGGCAGTCAGATCTTCATCAAGCACATTACAGATTCGGGCCTGGCTGCCCGGCACCGTGGGCTGCAGGAAGGAGATCTCATTCTACAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Downstream Sites	Number of Circ Exons Sites
chr19:3730028\|3732038	NOP58	1	0
chr19:3730028\|3732038	CSTF2T	0	2
chr19:3730028\|3732038	DDX54	0	4
chr19:3730028\|3732038	PRPF8	2	0
chr19:3730028\|3732038	IGF2BP2	1	0
chr19:3730028\|3732038	EIF4A3	0	3

CircRNA Information