CircRNA Information

General Information
circRNA Basic Information
CircID chr19:38207478|38207646
Strand +
CircType exon
Host Gene ENSG00000105738.9;
Algorism CIRI2;
Sequence CTGCTCCGCCAACTCCTCCCCGCCTGGTGCCTCCCAAAAAGGGCACCGGCCTGCCCTGACTTCATCCCTCTGGTCCTCCCACTGACCCCCAGCCCACAGGGGACACGCCTTGGTCCTCAGCTTGAGGTTGGGGGGATGAATCCACAGACTGTGGCCATACAGGCTTGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:38207478|38207646 hsa-miR-571 0 0 1
chr19:38207478|38207646 hsa-miR-588 0 1 1
chr19:38207478|38207646 hsa-miR-622 0 0 1
chr19:38207478|38207646 hsa-miR-637 0 0 1
chr19:38207478|38207646 hsa-miR-650 0 0 1
chr19:38207478|38207646 hsa-miR-765 0 0 1
chr19:38207478|38207646 hsa-miR-938 0 0 1
chr19:38207478|38207646 hsa-miR-1224-5p 0 1 1
chr19:38207478|38207646 hsa-miR-331-3p 0 0 1
chr19:38207478|38207646 hsa-miR-663 0 0 1
chr19:38207478|38207646 hsa-miR-611 1 0 0
chr19:38207478|38207646 hsa-miR-663a 1 0 0
chr19:38207478|38207646 hsa-miR-658 1 0 0
chr19:38207478|38207646 hsa-miR-762 1 1 0
chr19:38207478|38207646 hsa-miR-1268a 1 0 0
chr19:38207478|38207646 hsa-miR-3141 1 0 0
chr19:38207478|38207646 hsa-miR-3149 0 1 0
chr19:38207478|38207646 hsa-miR-3197 1 0 0
chr19:38207478|38207646 hsa-miR-4296 0 1 0
chr19:38207478|38207646 hsa-miR-4322 0 1 0
chr19:38207478|38207646 hsa-miR-3937 0 1 0
chr19:38207478|38207646 hsa-miR-1268b 1 0 0
chr19:38207478|38207646 hsa-miR-4498 1 1 0
chr19:38207478|38207646 hsa-miR-1587 1 1 0
chr19:38207478|38207646 hsa-miR-4651 1 0 0
chr19:38207478|38207646 hsa-miR-4656 1 0 0
chr19:38207478|38207646 hsa-miR-4706 1 1 0
chr19:38207478|38207646 hsa-miR-4730 0 1 0
chr19:38207478|38207646 hsa-miR-4734 1 0 0
chr19:38207478|38207646 hsa-miR-4739 1 1 0
chr19:38207478|38207646 hsa-miR-4741 1 0 0
chr19:38207478|38207646 hsa-miR-4751 0 1 0
chr19:38207478|38207646 hsa-miR-5787 1 1 0
chr19:38207478|38207646 hsa-miR-8072 1 0 0
chr19:38207478|38207646 hsa-miR-8089 1 0 0
chr19:38207478|38207646 hsa-miR-92a-1-5p 1 0 0
chr19:38207478|38207646 hsa-miR-92a-2-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4731-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6765-5p 1 0 0
chr19:38207478|38207646 hsa-miR-7106-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6825-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6894-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6799-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6728-5p 1 0 0
chr19:38207478|38207646 hsa-miR-3663-3p 1 0 0
chr19:38207478|38207646 hsa-miR-6089 1 0 0
chr19:38207478|38207646 hsa-miR-3192-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6757-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6873-5p 0 1 0
chr19:38207478|38207646 hsa-miR-4695-5p 1 0 0
chr19:38207478|38207646 hsa-miR-593-5p 0 1 0
chr19:38207478|38207646 hsa-miR-7160-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6727-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6748-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6793-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6798-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6774-3p 0 1 0
chr19:38207478|38207646 hsa-miR-6735-3p 1 0 0
chr19:38207478|38207646 hsa-miR-615-3p 1 0 0
chr19:38207478|38207646 hsa-miR-6786-5p 1 0 0
chr19:38207478|38207646 hsa-miR-1226-5p 1 0 0
chr19:38207478|38207646 hsa-miR-1229-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4640-5p 1 0 0
chr19:38207478|38207646 hsa-miR-1908-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6771-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4787-5p 1 0 0
chr19:38207478|38207646 hsa-miR-149-3p 1 0 0
chr19:38207478|38207646 hsa-miR-6824-5p 1 0 0
chr19:38207478|38207646 hsa-miR-146b-3p 0 1 0
chr19:38207478|38207646 hsa-miR-4776-5p 1 0 0
chr19:38207478|38207646 hsa-miR-525-5p 0 1 0
chr19:38207478|38207646 hsa-miR-744-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6729-3p 0 1 0
chr19:38207478|38207646 hsa-miR-1207-5p 1 0 0
chr19:38207478|38207646 hsa-miR-1233-5p 1 1 0
chr19:38207478|38207646 hsa-miR-1273h-5p 0 1 0
chr19:38207478|38207646 hsa-miR-4763-3p 1 0 0
chr19:38207478|38207646 hsa-miR-6769b-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6778-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6787-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6775-5p 1 0 0
chr19:38207478|38207646 hsa-miR-5001-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6737-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6752-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6754-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6756-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6769a-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6803-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6819-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6751-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6763-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6779-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6780a-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6808-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6879-5p 0 1 0
chr19:38207478|38207646 hsa-miR-7111-5p 1 0 0
chr19:38207478|38207646 hsa-miR-3620-5p 1 1 0
chr19:38207478|38207646 hsa-miR-4728-5p 1 0 0
chr19:38207478|38207646 hsa-miR-10396a-5p 1 0 0
chr19:38207478|38207646 hsa-miR-10396b-5p 1 0 0
chr19:38207478|38207646 hsa-miR-328-5p 1 1 0
chr19:38207478|38207646 hsa-miR-4632-5p 1 1 0
chr19:38207478|38207646 hsa-miR-4649-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4726-5p 1 1 0
chr19:38207478|38207646 hsa-miR-4749-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6729-5p 1 0 0
chr19:38207478|38207646 hsa-miR-675-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6777-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6794-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6795-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6848-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6858-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6887-5p 1 1 0
chr19:38207478|38207646 hsa-miR-6889-5p 1 0 0
chr19:38207478|38207646 hsa-miR-6885-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4758-5p 1 0 0
chr19:38207478|38207646 hsa-miR-7843-5p 0 1 0
chr19:38207478|38207646 hsa-miR-6785-5p 1 0 0
chr19:38207478|38207646 hsa-miR-4667-5p 1 0 0
chr19:38207478|38207646 hsa-miR-9851-3p 1 1 0
chr19:38207478|38207646 hsa-miR-664a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:38207478|38207646
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence LLRQLLPAWCLPKRAPACPDFIPLVLPLTPSPQGTRLGPQLEVGGMNPQTVAIQAC
Nucleotide Sequence CTGCTCCGCCAACTCCTCCCCGCCTGGTGCCTCCCAAAAAGGGCACCGGCCTGCCCTGACTTCATCCCTCTGGTCCTCCCACTGACCCCCAGCCCACAGGGGACACGCCTTGGTCCTCAGCTTGAGGTTGGGGGGATGAATCCACAGACTGTGGCCATACAGGCTTGT

CircID chr19:38207478|38207646
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MYGHSLWIHPPNLKLRTKACPLWAGGQWEDQRDEVRAGRCPFWEAPGGEELAEQ
Nucleotide Sequence CTGTATGGCCACAGTCTGTGGATTCATCCCCCCAACCTCAAGCTGAGGACCAAGGCGTGTCCCCTGTGGGCTGGGGGTCAGTGGGAGGACCAGAGGGATGAAGTCAGGGCAGGCCGGTGCCCTTTTTGGGAGGCACCAGGCGGGGAGGAGTTGGCGGAGCAG

CircID chr19:38207478|38207646
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MGVSGRTRGMKSGQAGALFGRHQAGRSWRS
Nucleotide Sequence CTGGGGGTCAGTGGGAGGACCAGAGGGATGAAGTCAGGGCAGGCCGGTGCCCTTTTTGGGAGGCACCAGGCGGGGAGGAGTTGGCGGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites