CircRNA Information

General Information
circRNA Basic Information
CircID chr19:38305198|38305393
Strand -
CircType exon
Host Gene ENSG00000167645.15;
Algorism CIRI2;
Sequence CTTGGGTTGGGGGCGGGGCTGGGCGGGACATGGGATGGAGGCGGTGCCTGTGGCCAGACAGGGTGGACCTTGGGGCCTGCAGGCAGGAGATGAGTTCGGCGGCCACAGTGGCCCCCAGCAGCAGCAGCAGCAGCGGGAGGTTCAGCGGGCGCGCTCACCGCACCAGGTGGAAGGTGAGCCAGTACATGAGCATAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:38305198|38305393 hsa-miR-10a-5p 0 0 1
chr19:38305198|38305393 hsa-miR-10a-3p 0 0 1
chr19:38305198|38305393 hsa-miR-10b-5p 0 0 1
chr19:38305198|38305393 hsa-miR-10b-3p 0 0 1
chr19:38305198|38305393 hsa-miR-149-5p 0 0 1
chr19:38305198|38305393 hsa-miR-149-3p 0 0 1
chr19:38305198|38305393 hsa-miR-193b-5p 0 0 1
chr19:38305198|38305393 hsa-miR-193b-3p 0 0 1
chr19:38305198|38305393 hsa-miR-588 0 0 1
chr19:38305198|38305393 hsa-miR-637 0 1 1
chr19:38305198|38305393 hsa-miR-675-5p 0 0 1
chr19:38305198|38305393 hsa-miR-675-3p 0 0 1
chr19:38305198|38305393 hsa-miR-892b 0 1 1
chr19:38305198|38305393 hsa-miR-1231 0 0 1
chr19:38305198|38305393 hsa-miR-663b 1 0 1
chr19:38305198|38305393 hsa-miR-1205 0 0 1
chr19:38305198|38305393 hsa-miR-1281 1 0 1
chr19:38305198|38305393 hsa-miR-339-5p 1 1 1
chr19:38305198|38305393 hsa-miR-339-3p 0 0 1
chr19:38305198|38305393 hsa-miR-193a-3p 0 0 1
chr19:38305198|38305393 hsa-miR-24 0 0 1
chr19:38305198|38305393 hsa-miR-346 1 0 0
chr19:38305198|38305393 hsa-miR-602 1 0 0
chr19:38305198|38305393 hsa-miR-636 1 0 0
chr19:38305198|38305393 hsa-miR-639 1 0 0
chr19:38305198|38305393 hsa-miR-647 0 1 0
chr19:38305198|38305393 hsa-miR-935 1 0 0
chr19:38305198|38305393 hsa-miR-1913 1 0 0
chr19:38305198|38305393 hsa-miR-1976 1 0 0
chr19:38305198|38305393 hsa-miR-718 1 0 0
chr19:38305198|38305393 hsa-miR-4258 1 0 0
chr19:38305198|38305393 hsa-miR-4252 0 1 0
chr19:38305198|38305393 hsa-miR-4421 0 1 0
chr19:38305198|38305393 hsa-miR-4449 1 0 0
chr19:38305198|38305393 hsa-miR-4479 1 0 0
chr19:38305198|38305393 hsa-miR-4767 1 0 0
chr19:38305198|38305393 hsa-miR-9899 1 0 0
chr19:38305198|38305393 hsa-miR-6749-3p 1 0 0
chr19:38305198|38305393 hsa-miR-15a-3p 1 0 0
chr19:38305198|38305393 hsa-miR-4731-5p 1 1 0
chr19:38305198|38305393 hsa-miR-6836-3p 1 0 0
chr19:38305198|38305393 hsa-miR-205-5p 1 0 0
chr19:38305198|38305393 hsa-miR-6720-5p 1 0 0
chr19:38305198|38305393 hsa-miR-766-3p 1 0 0
chr19:38305198|38305393 hsa-miR-593-5p 1 0 0
chr19:38305198|38305393 hsa-miR-874-5p 0 1 0
chr19:38305198|38305393 hsa-miR-6849-3p 1 0 0
chr19:38305198|38305393 hsa-miR-7110-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6726-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6845-3p 0 1 0
chr19:38305198|38305393 hsa-miR-7108-5p 1 1 0
chr19:38305198|38305393 hsa-miR-6765-3p 0 1 0
chr19:38305198|38305393 hsa-miR-6716-3p 0 1 0
chr19:38305198|38305393 hsa-miR-4763-5p 1 0 0
chr19:38305198|38305393 hsa-miR-7108-3p 1 1 0
chr19:38305198|38305393 hsa-miR-1247-5p 1 1 0
chr19:38305198|38305393 hsa-miR-4707-3p 1 0 0
chr19:38305198|38305393 hsa-miR-1908-3p 1 0 0
chr19:38305198|38305393 hsa-miR-5001-3p 1 0 0
chr19:38305198|38305393 hsa-miR-5580-5p 0 1 0
chr19:38305198|38305393 hsa-miR-4783-5p 1 1 0
chr19:38305198|38305393 hsa-miR-3190-5p 1 0 0
chr19:38305198|38305393 hsa-miR-6785-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6887-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6793-3p 0 1 0
chr19:38305198|38305393 hsa-miR-6752-3p 1 1 0
chr19:38305198|38305393 hsa-miR-1292-3p 0 1 0
chr19:38305198|38305393 hsa-miR-6880-3p 1 0 0
chr19:38305198|38305393 hsa-miR-3184-3p 1 0 0
chr19:38305198|38305393 hsa-miR-4433a-5p 1 0 0
chr19:38305198|38305393 hsa-miR-3173-5p 1 0 0
chr19:38305198|38305393 hsa-miR-4433b-5p 1 0 0
chr19:38305198|38305393 hsa-miR-6729-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6847-3p 0 1 0
chr19:38305198|38305393 hsa-miR-6850-3p 1 0 0
chr19:38305198|38305393 hsa-miR-4787-3p 1 0 0
chr19:38305198|38305393 hsa-miR-885-5p 1 0 0
chr19:38305198|38305393 hsa-miR-4716-5p 1 0 0
chr19:38305198|38305393 hsa-miR-4685-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6836-5p 1 0 0
chr19:38305198|38305393 hsa-miR-4745-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6791-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6762-5p 0 1 0
chr19:38305198|38305393 hsa-miR-6756-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6862-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6829-3p 1 0 0
chr19:38305198|38305393 hsa-miR-10392-3p 0 1 0
chr19:38305198|38305393 hsa-miR-6751-3p 0 1 0
chr19:38305198|38305393 hsa-miR-4701-5p 0 1 0
chr19:38305198|38305393 hsa-miR-10394-5p 0 1 0
chr19:38305198|38305393 hsa-miR-6781-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6827-3p 1 0 0
chr19:38305198|38305393 hsa-miR-4690-3p 1 0 0
chr19:38305198|38305393 hsa-miR-4769-3p 1 0 0
chr19:38305198|38305393 hsa-miR-6811-5p 0 1 0
chr19:38305198|38305393 hsa-miR-6834-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:38305198|38305393
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MGAGLGGTWDGGGACGQTGWTLGPAGRR
Nucleotide Sequence TTGGGGGCGGGGCTGGGCGGGACATGGGATGGAGGCGGTGCCTGTGGCCAGACAGGGTGGACCTTGGGGCCTGCAGGCAGGAGATGA
CircID chr19:38305198|38305393
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence LGWGRGWAGHGMEAVPVARQGGPWGLQAGDEFGGHSGPQQQQQQREVQRARSPHQVEGEPVHEHR
Nucleotide Sequence TTGGGTTGGGGGCGGGGCTGGGCGGGACATGGGATGGAGGCGGTGCCTGTGGCCAGACAGGGTGGACCTTGGGGCCTGCAGGCAGGAGATGAGTTCGGCGGCCACAGTGGCCCCCAGCAGCAGCAGCAGCAGCGGGAGGTTCAGCGGGCGCGCTCACCGCACCAGGTGGAAGGTGAGCCAGTACATGAGCATAGG
CircID chr19:38305198|38305393
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MGWRRCLWPDRVDLGACRQEMSSAATVAPSSSSSSGRFSGRAHRTRWKVSQYMSI
Nucleotide Sequence ATGGGATGGAGGCGGTGCCTGTGGCCAGACAGGGTGGACCTTGGGGCCTGCAGGCAGGAGATGAGTTCGGCGGCCACAGTGGCCCCCAGCAGCAGCAGCAGCAGCGGGAGGTTCAGCGGGCGCGCTCACCGCACCAGGTGGAAGGTGAGCCAGTACATGAGCATA
CircID chr19:38305198|38305393
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MNLPLLLLLLGATVAAELISCLQAPRSTLSGHRHRLHPMSRPAPPPTQ
Nucleotide Sequence CTGAACCTCCCGCTGCTGCTGCTGCTGCTGGGGGCCACTGTGGCCGCCGAACTCATCTCCTGCCTGCAGGCCCCAAGGTCCACCCTGTCTGGCCACAGGCACCGCCTCCATCCCATGTCCCGCCCAGCCCCGCCCCCAACCCAA
CircID chr19:38305198|38305393
ORF Type ORF5
Protein Length 36
Nucleotide Length 108
Protein Sequence MWPPNSSPACRPQGPPCLATGTASIPCPAQPRPQPK
Nucleotide Sequence CTGTGGCCGCCGAACTCATCTCCTGCCTGCAGGCCCCAAGGTCCACCCTGTCTGGCCACAGGCACCGCCTCCATCCCATGTCCCGCCCAGCCCCGCCCCCAACCCAAG
CircID chr19:38305198|38305393
ORF Type ORF6
Protein Length 60
Nucleotide Length 180
Protein Sequence MAHLPPGAVSAPAEPPAAAAAAGGHCGRRTHLLPAGPKVHPVWPQAPPPSHVPPSPAPNP
Nucleotide Sequence CTGGCTCACCTTCCACCTGGTGCGGTGAGCGCGCCCGCTGAACCTCCCGCTGCTGCTGCTGCTGCTGGGGGCCACTGTGGCCGCCGAACTCATCTCCTGCCTGCAGGCCCCAAGGTCCACCCTGTCTGGCCACAGGCACCGCCTCCATCCCATGTCCCGCCCAGCCCCGCCCCCAACCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab