CircNet

General Information

circRNA Basic Information

CircID	chr19:38383421\|38383622
Strand	-
CircType	exon
Host Gene	ENSG00000099341.10;
Algorism	CIRI2;
Sequence	GAGTTATTTAAAACAGTTACACTGCAGGGTTTCGCCCAATAAAGGTGGACTGACATTCCCTCTTCCAGGCCCTTGTCTCCCCAGTTGGGACGGCAGAGAGACAAGTTCTTATATCTGAAGAACTTGGAGGTTTTGGGGCATTCAGGAGTTGGAGATAGCCTCCAACTGGGTCAGCCTCTGTCTGGTGGGCATTGCTCAGGGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:38383421\|38383622	hsa-miR-223-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-223-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-206	0	0	1
chr19:38383421\|38383622	hsa-miR-452-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-452-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-593-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-593-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-613	0	1	1
chr19:38383421\|38383622	hsa-miR-650	0	0	1
chr19:38383421\|38383622	hsa-miR-939-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-939-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-1324	0	1	1
chr19:38383421\|38383622	hsa-miR-485-5p	0	1	1
chr19:38383421\|38383622	hsa-miR-125a-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-455-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-515-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-548b-3p	0	0	1
chr19:38383421\|38383622	hsa-miR-125b	0	0	1
chr19:38383421\|38383622	hsa-miR-7	0	0	1
chr19:38383421\|38383622	hsa-miR-1	0	0	1
chr19:38383421\|38383622	hsa-miR-1254	0	0	1
chr19:38383421\|38383622	hsa-miR-768-5p	0	0	1
chr19:38383421\|38383622	hsa-miR-365	0	0	1
chr19:38383421\|38383622	hsa-miR-1182	0	1	0
chr19:38383421\|38383622	hsa-miR-2861	1	1	0
chr19:38383421\|38383622	hsa-miR-3196	1	0	0
chr19:38383421\|38383622	hsa-miR-4319	1	1	0
chr19:38383421\|38383622	hsa-miR-3908	0	1	0
chr19:38383421\|38383622	hsa-miR-1268b	1	0	0
chr19:38383421\|38383622	hsa-miR-4511	0	1	0
chr19:38383421\|38383622	hsa-miR-3975	0	1	0
chr19:38383421\|38383622	hsa-miR-6081	1	0	0
chr19:38383421\|38383622	hsa-miR-8089	0	1	0
chr19:38383421\|38383622	hsa-miR-22-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-17-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-671-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-139-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-6873-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-6873-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-6798-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-7109-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-6749-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-6818-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-6824-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-371b-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-6797-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-6889-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-3116	0	1	0
chr19:38383421\|38383622	hsa-miR-4667-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-6791-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-6837-5p	1	0	0
chr19:38383421\|38383622	hsa-miR-4482-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-4653-5p	0	1	0
chr19:38383421\|38383622	hsa-miR-365a-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-365b-3p	0	1	0
chr19:38383421\|38383622	hsa-miR-3140-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:38383421\|38383622
ORF Type	ORF1
Protein Length	43
Nucleotide Length	129
Protein Sequence	MSPQLGRQRDKFLYLKNLEVLGHSGVGDSLQLGQPLSGGHCSG
Nucleotide Sequence	TTGTCTCCCCAGTTGGGACGGCAGAGAGACAAGTTCTTATATCTGAAGAACTTGGAGGTTTTGGGGCATTCAGGAGTTGGAGATAGCCTCCAACTGGGTCAGCCTCTGTCTGGTGGGCATTGCTCAGGG

CircID	chr19:38383421\|38383622
ORF Type	ORF2
Protein Length	60
Nucleotide Length	183
Protein Sequence	MSNAHQTEADPVGGYLQLLNAPKPPSSSDIRTCLSAVPTGETRAWKRECQSTFIGRNPAV
Nucleotide Sequence	CTGAGCAATGCCCACCAGACAGAGGCTGACCCAGTTGGAGGCTATCTCCAACTCCTGAATGCCCCAAAACCTCCAAGTTCTTCAGATATAAGAACTTGTCTCTCTGCCGTCCCAACTGGGGAGACAAGGGCCTGGAAGAGGGAATGTCAGTCCACCTTTATTGGGCGAAACCCTGCAGTGTAA

CircID	chr19:38383421\|38383622
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MPSQLGRQGPGRGNVSPPLLGETLQCNCFK
Nucleotide Sequence	CTGCCGTCCCAACTGGGGAGACAAGGGCCTGGAAGAGGGAATGTCAGTCCACCTTTATTGGGCGAAACCCTGCAGTGTAACTGTTTTAAATAA

CircID	chr19:38383421\|38383622
ORF Type	ORF4
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSLCRPNWGDKGLEEGMSVHLYWAKPCSVTVLNN
Nucleotide Sequence	TTGTCTCTCTGCCGTCCCAACTGGGGAGACAAGGGCCTGGAAGAGGGAATGTCAGTCCACCTTTATTGGGCGAAACCCTGCAGTGTAACTGTTTTAAATAAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information