CircRNA Information

General Information
circRNA Basic Information
CircID chr19:38724303|38724502
Strand -
CircType exon
Host Gene ENSG00000130402.10;
Algorism CIRI2;
Sequence CGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGTGGGCCGGGGCCATCCGTAGGGGCTGGGGCAGGACGGCGGGGCTGGGGGCCACCTCCCTGACCGCTCCCACACCGCGTCTCCTCTGCCAGGTGCAGCAGCTGGTGCCAAAACGGGACCATGCCCTCCTGGAGGAGCAGAGCAAGCAGCAGTCCAACGAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:38724303|38724502 hsa-miR-96-5p 0 0 1
chr19:38724303|38724502 hsa-miR-96-3p 0 0 1
chr19:38724303|38724502 hsa-miR-182-5p 0 0 1
chr19:38724303|38724502 hsa-miR-182-3p 0 0 1
chr19:38724303|38724502 hsa-miR-150-5p 0 0 1
chr19:38724303|38724502 hsa-miR-150-3p 0 0 1
chr19:38724303|38724502 hsa-miR-432-5p 0 0 1
chr19:38724303|38724502 hsa-miR-432-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1271-5p 0 0 1
chr19:38724303|38724502 hsa-miR-1271-3p 0 0 1
chr19:38724303|38724502 hsa-miR-890 0 0 1
chr19:38724303|38724502 hsa-miR-744-5p 0 0 1
chr19:38724303|38724502 hsa-miR-744-3p 0 0 1
chr19:38724303|38724502 hsa-miR-665 0 1 1
chr19:38724303|38724502 hsa-miR-920 0 0 1
chr19:38724303|38724502 hsa-miR-1226-5p 0 0 1
chr19:38724303|38724502 hsa-miR-1226-3p 0 0 1
chr19:38724303|38724502 hsa-miR-663b 0 1 1
chr19:38724303|38724502 hsa-miR-1288-5p 0 0 1
chr19:38724303|38724502 hsa-miR-1288-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1306-5p 0 0 1
chr19:38724303|38724502 hsa-miR-1306-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1321 0 1 1
chr19:38724303|38724502 hsa-miR-139-3p 1 1 1
chr19:38724303|38724502 hsa-miR-532-3p 0 0 1
chr19:38724303|38724502 hsa-miR-361-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1224-3p 0 1 1
chr19:38724303|38724502 hsa-miR-767-3p 0 0 1
chr19:38724303|38724502 hsa-miR-324-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1269 0 0 1
chr19:38724303|38724502 hsa-miR-219-1-3p 0 0 1
chr19:38724303|38724502 hsa-miR-1269a 0 1 0
chr19:38724303|38724502 hsa-miR-1913 0 1 0
chr19:38724303|38724502 hsa-miR-2861 1 0 0
chr19:38724303|38724502 hsa-miR-1269b 0 1 0
chr19:38724303|38724502 hsa-miR-4689 1 1 0
chr19:38724303|38724502 hsa-miR-4739 0 1 0
chr19:38724303|38724502 hsa-miR-4779 0 1 0
chr19:38724303|38724502 hsa-miR-4784 0 1 0
chr19:38724303|38724502 hsa-miR-5691 0 1 0
chr19:38724303|38724502 hsa-miR-6863 0 1 0
chr19:38724303|38724502 hsa-miR-8073 0 1 0
chr19:38724303|38724502 hsa-miR-12133 0 1 0
chr19:38724303|38724502 hsa-miR-3194-3p 0 1 0
chr19:38724303|38724502 hsa-miR-6720-5p 1 0 0
chr19:38724303|38724502 hsa-miR-766-3p 1 1 0
chr19:38724303|38724502 hsa-miR-1225-3p 1 0 0
chr19:38724303|38724502 hsa-miR-593-5p 0 1 0
chr19:38724303|38724502 hsa-miR-6762-3p 0 1 0
chr19:38724303|38724502 hsa-miR-4761-3p 0 1 0
chr19:38724303|38724502 hsa-miR-4713-5p 0 1 0
chr19:38724303|38724502 hsa-miR-4763-5p 1 0 0
chr19:38724303|38724502 hsa-miR-6763-3p 1 0 0
chr19:38724303|38724502 hsa-miR-3944-3p 1 0 0
chr19:38724303|38724502 hsa-miR-6771-5p 0 1 0
chr19:38724303|38724502 hsa-miR-3614-5p 0 1 0
chr19:38724303|38724502 hsa-miR-6847-5p 0 1 0
chr19:38724303|38724502 hsa-miR-4707-5p 1 1 0
chr19:38724303|38724502 hsa-miR-4529-3p 1 1 0
chr19:38724303|38724502 hsa-miR-328-3p 0 1 0
chr19:38724303|38724502 hsa-miR-6748-3p 0 1 0
chr19:38724303|38724502 hsa-miR-500a-3p 0 1 0
chr19:38724303|38724502 hsa-miR-3156-3p 0 1 0
chr19:38724303|38724502 hsa-miR-1233-5p 0 1 0
chr19:38724303|38724502 hsa-miR-4763-3p 1 0 0
chr19:38724303|38724502 hsa-miR-6778-5p 0 1 0
chr19:38724303|38724502 hsa-miR-6754-5p 0 1 0
chr19:38724303|38724502 hsa-miR-6842-5p 1 1 0
chr19:38724303|38724502 hsa-miR-6851-5p 0 1 0
chr19:38724303|38724502 hsa-miR-10401-5p 0 1 0
chr19:38724303|38724502 hsa-miR-10396a-3p 1 1 0
chr19:38724303|38724502 hsa-miR-10396b-3p 1 1 0
chr19:38724303|38724502 hsa-miR-3689d 0 1 0
chr19:38724303|38724502 hsa-miR-6792-3p 0 1 0
chr19:38724303|38724502 hsa-miR-10401-3p 1 1 0
chr19:38724303|38724502 hsa-miR-6805-3p 0 1 0
chr19:38724303|38724502 hsa-miR-9851-3p 0 1 0
chr19:38724303|38724502 hsa-miR-10392-3p 1 1 0
chr19:38724303|38724502 hsa-miR-4756-5p 0 1 0
chr19:38724303|38724502 hsa-miR-4691-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:38724303|38724502
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MGQDGGAGGHLPDRSHTASPLPGAAAGAKTGPCPPGGAEQAAVQRA
Nucleotide Sequence CTGGGGCAGGACGGCGGGGCTGGGGGCCACCTCCCTGACCGCTCCCACACCGCGTCTCCTCTGCCAGGTGCAGCAGCTGGTGCCAAAACGGGACCATGCCCTCCTGGAGGAGCAGAGCAAGCAGCAGTCCAACGAGCA

CircID chr19:38724303|38724502
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MGATSLTAPTPRLLCQVQQLVPKRDHALLEEQSKQQSNEH
Nucleotide Sequence CTGGGGGCCACCTCCCTGACCGCTCCCACACCGCGTCTCCTCTGCCAGGTGCAGCAGCTGGTGCCAAAACGGGACCATGCCCTCCTGGAGGAGCAGAGCAAGCAGCAGTCCAACGAGCAC

CircID chr19:38724303|38724502
ORF Type ORF3
Protein Length 56
Nucleotide Length 171
Protein Sequence MLLALLLQEGMVPFWHQLLHLAEETRCGSGQGGGPQPRRPAPAPTDGPGPPSPTWS
Nucleotide Sequence CTGCTGCTTGCTCTGCTCCTCCAGGAGGGCATGGTCCCGTTTTGGCACCAGCTGCTGCACCTGGCAGAGGAGACGCGGTGTGGGAGCGGTCAGGGAGGTGGCCCCCAGCCCCGCCGTCCTGCCCCAGCCCCTACGGATGGCCCCGGCCCACCTTCTCCCACTTGGAGTTGA

CircID chr19:38724303|38724502
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MDCCLLCSSRRAWSRFGTSCCTWQRRRGVGAVREVAPSPAVLPQPLRMAPAHLLPLGVDDLRGD
Nucleotide Sequence TTGGACTGCTGCTTGCTCTGCTCCTCCAGGAGGGCATGGTCCCGTTTTGGCACCAGCTGCTGCACCTGGCAGAGGAGACGCGGTGTGGGAGCGGTCAGGGAGGTGGCCCCCAGCCCCGCCGTCCTGCCCCAGCCCCTACGGATGGCCCCGGCCCACCTTCTCCCACTTGGAGTTGATGATTTGCGGGGTGAC

CircID chr19:38724303|38724502
ORF Type ORF5
Protein Length 49
Nucleotide Length 147
Protein Sequence MAPAAAPGRGDAVWERSGRWPPAPPSCPSPYGWPRPTFSHLELMICGVT
Nucleotide Sequence TTGGCACCAGCTGCTGCACCTGGCAGAGGAGACGCGGTGTGGGAGCGGTCAGGGAGGTGGCCCCCAGCCCCGCCGTCCTGCCCCAGCCCCTACGGATGGCCCCGGCCCACCTTCTCCCACTTGGAGTTGATGATTTGCGGGGTGACG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites