CircRNA Information

General Information
circRNA Basic Information
CircID chr19:38729103|38729361
Strand -
CircType exon
Host Gene ENSG00000130402.10;
Algorism CIRI2;
Sequence GGACACGGCTGACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAAGGTGAGCGAGACCCCTACGAGGTGCATGGGGGCTGGCGAGAGGGGTCCCTGCAGTGGGAGGGGCTGAGGGGGCCAGTGTGTGGGTGGGGATGGCTCAGAGTCCCATCCTGCCTGCCCCAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:38729103|38729361 hsa-miR-193b-5p 0 0 1
chr19:38729103|38729361 hsa-miR-193b-3p 0 0 1
chr19:38729103|38729361 hsa-miR-603 0 0 1
chr19:38729103|38729361 hsa-miR-631 0 0 1
chr19:38729103|38729361 hsa-miR-637 1 0 1
chr19:38729103|38729361 hsa-miR-652-5p 0 0 1
chr19:38729103|38729361 hsa-miR-652-3p 0 0 1
chr19:38729103|38729361 hsa-miR-940 1 0 1
chr19:38729103|38729361 hsa-miR-1234-3p 0 0 1
chr19:38729103|38729361 hsa-miR-1205 0 1 1
chr19:38729103|38729361 hsa-miR-1291 0 0 1
chr19:38729103|38729361 hsa-miR-1252-5p 0 0 1
chr19:38729103|38729361 hsa-miR-1252-3p 0 0 1
chr19:38729103|38729361 hsa-miR-1234 0 0 1
chr19:38729103|38729361 hsa-miR-486-3p 0 1 1
chr19:38729103|38729361 hsa-miR-532-3p 0 0 1
chr19:38729103|38729361 hsa-miR-566 0 0 1
chr19:38729103|38729361 hsa-miR-1207-3p 0 0 1
chr19:38729103|38729361 hsa-miR-331-3p 0 0 1
chr19:38729103|38729361 hsa-miR-502-3p 0 1 1
chr19:38729103|38729361 hsa-miR-501-3p 0 0 1
chr19:38729103|38729361 hsa-miR-509-3-5p 0 0 1
chr19:38729103|38729361 hsa-miR-509-5p 0 0 1
chr19:38729103|38729361 hsa-miR-193a-3p 0 1 1
chr19:38729103|38729361 hsa-miR-720 0 0 1
chr19:38729103|38729361 hsa-miR-326 0 1 0
chr19:38729103|38729361 hsa-miR-346 1 0 0
chr19:38729103|38729361 hsa-miR-663a 1 0 0
chr19:38729103|38729361 hsa-miR-1202 1 0 0
chr19:38729103|38729361 hsa-miR-2861 1 0 0
chr19:38729103|38729361 hsa-miR-3170 0 1 0
chr19:38729103|38729361 hsa-miR-4313 0 1 0
chr19:38729103|38729361 hsa-miR-4268 0 1 0
chr19:38729103|38729361 hsa-miR-3943 0 1 0
chr19:38729103|38729361 hsa-miR-4418 0 1 0
chr19:38729103|38729361 hsa-miR-4479 1 0 0
chr19:38729103|38729361 hsa-miR-2392 0 1 0
chr19:38729103|38729361 hsa-miR-4514 0 1 0
chr19:38729103|38729361 hsa-miR-3972 1 0 0
chr19:38729103|38729361 hsa-miR-4688 1 0 0
chr19:38729103|38729361 hsa-miR-4692 0 1 0
chr19:38729103|38729361 hsa-miR-4734 1 0 0
chr19:38729103|38729361 hsa-miR-4739 1 0 0
chr19:38729103|38729361 hsa-miR-4767 1 0 0
chr19:38729103|38729361 hsa-miR-5193 0 1 0
chr19:38729103|38729361 hsa-miR-6081 1 0 0
chr19:38729103|38729361 hsa-miR-7974 1 0 0
chr19:38729103|38729361 hsa-miR-8074 0 1 0
chr19:38729103|38729361 hsa-miR-8089 1 0 0
chr19:38729103|38729361 hsa-miR-370-3p 1 0 0
chr19:38729103|38729361 hsa-miR-512-5p 1 0 0
chr19:38729103|38729361 hsa-miR-4665-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6894-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6720-5p 1 0 0
chr19:38729103|38729361 hsa-miR-766-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6892-3p 1 1 0
chr19:38729103|38729361 hsa-miR-766-5p 0 1 0
chr19:38729103|38729361 hsa-miR-1225-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6727-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6849-3p 0 1 0
chr19:38729103|38729361 hsa-miR-7110-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6787-3p 0 1 0
chr19:38729103|38729361 hsa-miR-4655-3p 1 0 0
chr19:38729103|38729361 hsa-miR-3156-5p 0 1 0
chr19:38729103|38729361 hsa-miR-3194-5p 1 1 0
chr19:38729103|38729361 hsa-miR-6850-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6735-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6858-3p 1 1 0
chr19:38729103|38729361 hsa-miR-4763-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6763-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4707-3p 1 0 0
chr19:38729103|38729361 hsa-miR-3944-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6757-3p 0 1 0
chr19:38729103|38729361 hsa-miR-7161-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4743-5p 1 0 0
chr19:38729103|38729361 hsa-miR-4787-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6736-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6769a-3p 0 1 0
chr19:38729103|38729361 hsa-miR-3190-5p 1 0 0
chr19:38729103|38729361 hsa-miR-1226-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4758-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4749-3p 1 1 0
chr19:38729103|38729361 hsa-miR-328-3p 1 1 0
chr19:38729103|38729361 hsa-miR-6795-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6859-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6777-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4750-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6846-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6729-3p 1 1 0
chr19:38729103|38729361 hsa-miR-3156-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6816-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6775-5p 0 1 0
chr19:38729103|38729361 hsa-miR-6743-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6803-5p 1 0 0
chr19:38729103|38729361 hsa-miR-7107-5p 1 1 0
chr19:38729103|38729361 hsa-miR-6808-5p 0 1 0
chr19:38729103|38729361 hsa-miR-6879-5p 0 1 0
chr19:38729103|38729361 hsa-miR-3620-5p 1 0 0
chr19:38729103|38729361 hsa-miR-328-5p 1 1 0
chr19:38729103|38729361 hsa-miR-4649-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6729-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6885-5p 1 0 0
chr19:38729103|38729361 hsa-miR-6511b-5p 0 1 0
chr19:38729103|38729361 hsa-miR-6791-5p 1 0 0
chr19:38729103|38729361 hsa-miR-4722-3p 1 0 0
chr19:38729103|38729361 hsa-miR-6784-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6862-3p 1 1 0
chr19:38729103|38729361 hsa-miR-6810-3p 0 1 0
chr19:38729103|38729361 hsa-miR-10392-3p 1 0 0
chr19:38729103|38729361 hsa-miR-4723-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6751-3p 0 1 0
chr19:38729103|38729361 hsa-miR-6833-3p 0 1 0
chr19:38729103|38729361 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:38729103|38729361
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MQWEGLRGPVCGWGWLRVPSCLPQNFITAEELRRELPPDQAEYCIARMAPYQG
Nucleotide Sequence CTGCAGTGGGAGGGGCTGAGGGGGCCAGTGTGTGGGTGGGGATGGCTCAGAGTCCCATCCTGCCTGCCCCAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGC
CircID chr19:38729103|38729361
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MRSCGESCPPTRPSTASPAWRHTRA
Nucleotide Sequence CTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCC
CircID chr19:38729103|38729361
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MARGVPAVGGAEGASVWVGMAQSPILPAPELHHS
Nucleotide Sequence CTGGCGAGAGGGGTCCCTGCAGTGGGAGGGGCTGAGGGGGCCAGTGTGTGGGTGGGGATGGCTCAGAGTCCCATCCTGCCTGCCCCAGAACTTCATCACAGCTGA
CircID chr19:38729103|38729361
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MAPSAPPTAGTPLASPHAPRRGLAHLVPC
Nucleotide Sequence CTGGCCCCCTCAGCCCCTCCCACTGCAGGGACCCCTCTCGCCAGCCCCCATGCACCTCGTAGGGGTCTCGCTCACCTTGTCCCCTGCTAA
CircID chr19:38729103|38729361
ORF Type ORF5
Protein Length 85
Nucleotide Length 255
Protein Sequence MVWRHAGDAVLGLVGGQLSPQLLSCDEVLGQAGWDSEPSPPTHWPPQPLPLQGPLSPAPMHLVGVSLTLSPAKTLKEAMTWSAVS
Nucleotide Sequence CTGGTATGGCGCCATGCGGGCGATGCAGTACTCGGCCTGGTCGGGGGGCAGCTCTCTCCGCAGCTCCTCAGCTGTGATGAAGTTCTGGGGCAGGCAGGATGGGACTCTGAGCCATCCCCACCCACACACTGGCCCCCTCAGCCCCTCCCACTGCAGGGACCCCTCTCGCCAGCCCCCATGCACCTCGTAGGGGTCTCGCTCACCTTGTCCCCTGCTAAGACCTTGAAGGAAGCGATGACCTGGTCAGCCGTGTCC
CircID chr19:38729103|38729361
ORF Type ORF6
Protein Length 58
Nucleotide Length 177
Protein Sequence MRAMQYSAWSGGSSLRSSSAVMKFWGRQDGTLSHPHPHTGPLSPSHCRDPSRQPPCTS
Nucleotide Sequence ATGCGGGCGATGCAGTACTCGGCCTGGTCGGGGGGCAGCTCTCTCCGCAGCTCCTCAGCTGTGATGAAGTTCTGGGGCAGGCAGGATGGGACTCTGAGCCATCCCCACCCACACACTGGCCCCCTCAGCCCCTCCCACTGCAGGGACCCCTCTCGCCAGCCCCCATGCACCTCGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab