CircNet

General Information

circRNA Basic Information

CircID	chr19:38729616\|38729768
Strand	+
CircType	exon
Host Gene	ENSG00000130402.10;
Algorism	CIRI2;
Sequence	CTGGGTGTGGTGAGGCATCCCAGGGCATGGAAGGGACCGGTTGTGCTGTGGGAATCCACTGGCCCCTCCTTGGTTAAAAAAGCACAACACATCATACATATTTACCAGACCAGAAGCGCTGGCCCCAAGTCTCCCCAACCTGGTCGGGGGAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:38729616\|38729768	hsa-miR-197-5p	0	0	1
chr19:38729616\|38729768	hsa-miR-197-3p	0	0	1
chr19:38729616\|38729768	hsa-miR-636	0	0	1
chr19:38729616\|38729768	hsa-miR-874-5p	0	0	1
chr19:38729616\|38729768	hsa-miR-874-3p	0	0	1
chr19:38729616\|38729768	hsa-miR-939-5p	0	0	1
chr19:38729616\|38729768	hsa-miR-939-3p	0	0	1
chr19:38729616\|38729768	hsa-miR-1272	0	0	1
chr19:38729616\|38729768	hsa-miR-1322	0	0	1
chr19:38729616\|38729768	hsa-miR-146b-3p	0	0	1
chr19:38729616\|38729768	hsa-miR-423-5p	0	0	1
chr19:38729616\|38729768	hsa-miR-188-3p	0	0	1
chr19:38729616\|38729768	hsa-miR-220b	0	0	1
chr19:38729616\|38729768	hsa-miR-1260	0	0	1
chr19:38729616\|38729768	hsa-miR-218	0	0	1
chr19:38729616\|38729768	hsa-miR-762	1	0	0
chr19:38729616\|38729768	hsa-miR-1275	1	0	0
chr19:38729616\|38729768	hsa-miR-2110	1	0	0
chr19:38729616\|38729768	hsa-miR-3196	1	0	0
chr19:38729616\|38729768	hsa-miR-3924	0	1	0
chr19:38729616\|38729768	hsa-miR-4489	1	1	0
chr19:38729616\|38729768	hsa-miR-4689	1	0	0
chr19:38729616\|38729768	hsa-miR-4739	1	0	0
chr19:38729616\|38729768	hsa-miR-4779	0	1	0
chr19:38729616\|38729768	hsa-miR-5572	1	0	0
chr19:38729616\|38729768	hsa-miR-12118	0	1	0
chr19:38729616\|38729768	hsa-miR-12126	1	1	0
chr19:38729616\|38729768	hsa-miR-128-3p	0	1	0
chr19:38729616\|38729768	hsa-miR-128-1-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-3150a-3p	1	1	0
chr19:38729616\|38729768	hsa-miR-6825-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-6857-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-1227-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-218-5p	0	1	0
chr19:38729616\|38729768	hsa-miR-3663-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6810-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-7109-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-4640-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-6824-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-7152-3p	1	0	0
chr19:38729616\|38729768	hsa-miR-4707-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-5088-3p	1	0	0
chr19:38729616\|38729768	hsa-miR-6812-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6870-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-1343-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6756-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6813-5p	0	1	0
chr19:38729616\|38729768	hsa-miR-6763-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-6779-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-4685-3p	1	1	0
chr19:38729616\|38729768	hsa-miR-4726-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-4749-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6794-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6795-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6889-5p	0	1	0
chr19:38729616\|38729768	hsa-miR-6845-5p	1	1	0
chr19:38729616\|38729768	hsa-miR-4665-5p	1	0	0
chr19:38729616\|38729768	hsa-miR-6891-5p	0	1	0
chr19:38729616\|38729768	hsa-miR-6762-5p	0	1	0
chr19:38729616\|38729768	hsa-miR-6756-3p	1	0	0
chr19:38729616\|38729768	hsa-miR-6511b-3p	0	1	0
chr19:38729616\|38729768	hsa-miR-6506-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:38729616\|38729768
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	LGVVRHPRAWKGPVVLWESTGPSLVKKAQHIIHIYQTRSAGPKSPQPGRGN
Nucleotide Sequence	CTGGGTGTGGTGAGGCATCCCAGGGCATGGAAGGGACCGGTTGTGCTGTGGGAATCCACTGGCCCCTCCTTGGTTAAAAAAGCACAACACATCATACATATTTACCAGACCAGAAGCGCTGGCCCCAAGTCTCCCCAACCTGGTCGGGGGAAC

CircID	chr19:38729616\|38729768
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MCCGNPLAPPWLKKHNTSYIFTRPEALAPSLPNLVGG
Nucleotide Sequence	TTGTGCTGTGGGAATCCACTGGCCCCTCCTTGGTTAAAAAAGCACAACACATCATACATATTTACCAGACCAGAAGCGCTGGCCCCAAGTCTCCCCAACCTGGTCGGGGGA

CircID	chr19:38729616\|38729768
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MGRLGASASGLVNMYDVLCFFNQGGASGFPQHNRSLPCPGMPHHTQ
Nucleotide Sequence	TTGGGGAGACTTGGGGCCAGCGCTTCTGGTCTGGTAAATATGTATGATGTGTTGTGCTTTTTTAACCAAGGAGGGGCCAGTGGATTCCCACAGCACAACCGGTCCCTTCCATGCCCTGGGATGCCTCACCACACCCAG

CircID	chr19:38729616\|38729768
ORF Type	ORF4
Protein Length	31
Nucleotide Length	93
Protein Sequence	MMCCAFLTKEGPVDSHSTTGPFHALGCLTTP
Nucleotide Sequence	ATGATGTGTTGTGCTTTTTTAACCAAGGAGGGGCCAGTGGATTCCCACAGCACAACCGGTCCCTTCCATGCCCTGGGATGCCTCACCACACCC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information