CircRNA Information

General Information
circRNA Basic Information
CircID chr19:38729722|38729887
Strand -
CircType exon
Host Gene ENSG00000130402.10;
Algorism CIRI2;
Sequence AGCACAACCGGTCCCTTCCATGCCCTGGGATGCCTCACCACACCCAGGTCTCTTCCTTTGCTCTGAGGTCCCTTCAAGGCCTCCCCAATCCAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACTGCCTGGGCCATGCGAGGGGCCAGCAGAGGGCGCCACCACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:38729722|38729887 hsa-miR-506-5p 0 0 1
chr19:38729722|38729887 hsa-miR-506-3p 0 0 1
chr19:38729722|38729887 hsa-miR-609 0 0 1
chr19:38729722|38729887 hsa-miR-631 0 0 1
chr19:38729722|38729887 hsa-miR-939-5p 0 0 1
chr19:38729722|38729887 hsa-miR-939-3p 0 0 1
chr19:38729722|38729887 hsa-miR-1827 0 0 1
chr19:38729722|38729887 hsa-miR-769-5p 0 1 1
chr19:38729722|38729887 hsa-miR-324-5p 0 1 1
chr19:38729722|38729887 hsa-miR-566 0 0 1
chr19:38729722|38729887 hsa-miR-876-3p 0 0 1
chr19:38729722|38729887 hsa-miR-323-5p 0 0 1
chr19:38729722|38729887 hsa-miR-124 0 0 1
chr19:38729722|38729887 hsa-miR-218 0 0 1
chr19:38729722|38729887 hsa-miR-1254 0 0 1
chr19:38729722|38729887 hsa-miR-612 1 0 0
chr19:38729722|38729887 hsa-miR-638 1 0 0
chr19:38729722|38729887 hsa-miR-663a 1 0 0
chr19:38729722|38729887 hsa-miR-762 1 0 0
chr19:38729722|38729887 hsa-miR-1182 1 0 0
chr19:38729722|38729887 hsa-miR-663b 0 1 0
chr19:38729722|38729887 hsa-miR-1268a 1 0 0
chr19:38729722|38729887 hsa-miR-1538 0 1 0
chr19:38729722|38729887 hsa-miR-2861 1 0 0
chr19:38729722|38729887 hsa-miR-3188 1 0 0
chr19:38729722|38729887 hsa-miR-3196 1 0 0
chr19:38729722|38729887 hsa-miR-4253 1 0 0
chr19:38729722|38729887 hsa-miR-3649 0 1 0
chr19:38729722|38729887 hsa-miR-3916 1 0 0
chr19:38729722|38729887 hsa-miR-3945 1 0 0
chr19:38729722|38729887 hsa-miR-1268b 1 0 0
chr19:38729722|38729887 hsa-miR-1587 1 0 0
chr19:38729722|38729887 hsa-miR-4673 0 1 0
chr19:38729722|38729887 hsa-miR-4689 1 0 0
chr19:38729722|38729887 hsa-miR-4692 0 1 0
chr19:38729722|38729887 hsa-miR-6075 1 0 0
chr19:38729722|38729887 hsa-miR-378j 0 1 0
chr19:38729722|38729887 hsa-miR-6745 1 0 0
chr19:38729722|38729887 hsa-miR-6860 1 1 0
chr19:38729722|38729887 hsa-miR-8085 1 0 0
chr19:38729722|38729887 hsa-miR-6734-5p 1 0 0
chr19:38729722|38729887 hsa-miR-3194-3p 0 1 0
chr19:38729722|38729887 hsa-miR-6747-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6765-5p 1 0 0
chr19:38729722|38729887 hsa-miR-3150a-3p 0 1 0
chr19:38729722|38729887 hsa-miR-6861-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6825-5p 0 1 0
chr19:38729722|38729887 hsa-miR-6857-5p 1 0 0
chr19:38729722|38729887 hsa-miR-25-5p 1 0 0
chr19:38729722|38729887 hsa-miR-7851-3p 0 1 0
chr19:38729722|38729887 hsa-miR-6089 1 0 0
chr19:38729722|38729887 hsa-miR-6890-5p 1 0 0
chr19:38729722|38729887 hsa-miR-3928-3p 1 0 0
chr19:38729722|38729887 hsa-miR-3622b-5p 1 1 0
chr19:38729722|38729887 hsa-miR-197-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6776-5p 0 1 0
chr19:38729722|38729887 hsa-miR-7845-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6716-5p 1 0 0
chr19:38729722|38729887 hsa-miR-185-3p 1 0 0
chr19:38729722|38729887 hsa-miR-2467-3p 1 0 0
chr19:38729722|38729887 hsa-miR-6728-3p 0 1 0
chr19:38729722|38729887 hsa-miR-7855-5p 0 1 0
chr19:38729722|38729887 hsa-miR-5006-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6786-5p 1 0 0
chr19:38729722|38729887 hsa-miR-1226-5p 1 0 0
chr19:38729722|38729887 hsa-miR-1229-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6753-5p 1 0 0
chr19:38729722|38729887 hsa-miR-3127-5p 1 0 0
chr19:38729722|38729887 hsa-miR-1908-5p 1 0 0
chr19:38729722|38729887 hsa-miR-4717-3p 1 1 0
chr19:38729722|38729887 hsa-miR-4638-3p 0 1 0
chr19:38729722|38729887 hsa-miR-6830-5p 1 0 0
chr19:38729722|38729887 hsa-miR-202-3p 1 1 0
chr19:38729722|38729887 hsa-miR-6824-5p 1 0 0
chr19:38729722|38729887 hsa-miR-450a-2-3p 0 1 0
chr19:38729722|38729887 hsa-miR-6892-5p 1 1 0
chr19:38729722|38729887 hsa-miR-6864-5p 1 1 0
chr19:38729722|38729887 hsa-miR-664b-5p 1 0 0
chr19:38729722|38729887 hsa-miR-584-3p 0 1 0
chr19:38729722|38729887 hsa-miR-2276-5p 0 1 0
chr19:38729722|38729887 hsa-miR-3675-5p 0 1 0
chr19:38729722|38729887 hsa-miR-6789-3p 0 1 0
chr19:38729722|38729887 hsa-miR-124-3p 0 1 0
chr19:38729722|38729887 hsa-miR-1207-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6775-5p 1 1 0
chr19:38729722|38729887 hsa-miR-5001-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6756-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6803-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6819-5p 1 0 0
chr19:38729722|38729887 hsa-miR-7107-5p 1 0 0
chr19:38729722|38729887 hsa-miR-10401-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6774-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6779-5p 0 1 0
chr19:38729722|38729887 hsa-miR-6797-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6875-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6879-5p 1 0 0
chr19:38729722|38729887 hsa-miR-1915-3p 1 1 0
chr19:38729722|38729887 hsa-miR-3620-5p 1 0 0
chr19:38729722|38729887 hsa-miR-5189-5p 1 1 0
chr19:38729722|38729887 hsa-miR-6862-5p 1 1 0
chr19:38729722|38729887 hsa-miR-328-5p 1 1 0
chr19:38729722|38729887 hsa-miR-449c-5p 0 1 0
chr19:38729722|38729887 hsa-miR-4649-5p 1 0 0
chr19:38729722|38729887 hsa-miR-4685-5p 1 1 0
chr19:38729722|38729887 hsa-miR-4749-5p 1 0 0
chr19:38729722|38729887 hsa-miR-6729-5p 1 0 0
chr19:38729722|38729887 hsa-miR-4723-5p 1 0 0
chr19:38729722|38729887 hsa-miR-1266-5p 0 1 0
chr19:38729722|38729887 hsa-miR-365a-5p 1 0 0
chr19:38729722|38729887 hsa-miR-3940-5p 1 1 0
chr19:38729722|38729887 hsa-miR-1914-3p 1 0 0
chr19:38729722|38729887 hsa-miR-769-3p 1 0 0
chr19:38729722|38729887 hsa-miR-6837-5p 0 1 0
chr19:38729722|38729887 hsa-miR-6764-5p 0 1 0
chr19:38729722|38729887 hsa-miR-2682-5p 0 1 0
chr19:38729722|38729887 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:38729722|38729887
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MPWDASPHPGLFLCSEVPSRPPQSRPKPHVPCPGTAWAMRGASRGRHHH
Nucleotide Sequence ATGCCCTGGGATGCCTCACCACACCCAGGTCTCTTCCTTTGCTCTGAGGTCCCTTCAAGGCCTCCCCAATCCAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACTGCCTGGGCCATGCGAGGGGCCAGCAGAGGGCGCCACCACCAC

CircID chr19:38729722|38729887
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MPHHTQVSSFALRSLQGLPNPGQSPMCLVQELPGPCEGPAEGATT
Nucleotide Sequence ATGCCTCACCACACCCAGGTCTCTTCCTTTGCTCTGAGGTCCCTTCAAGGCCTCCCCAATCCAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACTGCCTGGGCCATGCGAGGGGCCAGCAGAGGGCGCCACCACC

CircID chr19:38729722|38729887
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MLAPRMAQAVPGQGTWGFGLDWGGLEGTSEQRKRPGCGEASQGMEGTGCA
Nucleotide Sequence CTGCTGGCCCCTCGCATGGCCCAGGCAGTTCCTGGACAAGGCACATGGGGCTTTGGCCTGGATTGGGGAGGCCTTGAAGGGACCTCAGAGCAAAGGAAGAGACCTGGGTGTGGTGAGGCATCCCAGGGCATGGAAGGGACCGGTTGTGCT

CircID chr19:38729722|38729887
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MDKAHGALAWIGEALKGPQSKGRDLGVVRHPRAWKGPVV
Nucleotide Sequence CTGGACAAGGCACATGGGGCTTTGGCCTGGATTGGGGAGGCCTTGAAGGGACCTCAGAGCAAAGGAAGAGACCTGGGTGTGGTGAGGCATCCCAGGGCATGGAAGGGACCGGTTGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites