CircRNA Information

General Information
circRNA Basic Information
CircID chr19:39377498|39377644
Strand +
CircType exon
Host Gene ENSG00000179134.13;
Algorism CIRI2;
Sequence CTGGCAGCGGTGGTTCCCCCGGGGCCCCATCCTTGGCAGTAGGGGTGGTGGTGGCGGCAGCCACGGTGGCCTGGAGGACACTGTAGGCCTTGATGGGAGTGATGATGATCTGCTGCAGCTCCTGCAGAGCGTTTCGTAGGTTCCCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:39377498|39377644 hsa-miR-107 0 0 1
chr19:39377498|39377644 hsa-miR-558 0 0 1
chr19:39377498|39377644 hsa-miR-604 0 0 1
chr19:39377498|39377644 hsa-miR-625-5p 0 0 1
chr19:39377498|39377644 hsa-miR-625-3p 0 0 1
chr19:39377498|39377644 hsa-miR-647 0 1 1
chr19:39377498|39377644 hsa-miR-708-5p 0 0 1
chr19:39377498|39377644 hsa-miR-708-3p 0 0 1
chr19:39377498|39377644 hsa-miR-922 0 1 1
chr19:39377498|39377644 hsa-miR-1205 0 1 1
chr19:39377498|39377644 hsa-miR-1286 0 0 1
chr19:39377498|39377644 hsa-miR-139-5p 0 0 1
chr19:39377498|39377644 hsa-miR-296-5p 0 0 1
chr19:39377498|39377644 hsa-miR-1184 0 1 1
chr19:39377498|39377644 hsa-miR-28-5p 0 1 1
chr19:39377498|39377644 hsa-miR-483-3p 0 0 1
chr19:39377498|39377644 hsa-miR-220b 0 0 1
chr19:39377498|39377644 hsa-miR-103 0 0 1
chr19:39377498|39377644 hsa-miR-3139 0 1 0
chr19:39377498|39377644 hsa-miR-2392 0 1 0
chr19:39377498|39377644 hsa-miR-132-5p 0 1 0
chr19:39377498|39377644 hsa-miR-1972 0 1 0
chr19:39377498|39377644 hsa-miR-4722-5p 0 1 0
chr19:39377498|39377644 hsa-miR-6874-5p 0 1 0
chr19:39377498|39377644 hsa-miR-6788-3p 0 1 0
chr19:39377498|39377644 hsa-miR-1908-3p 1 0 0
chr19:39377498|39377644 hsa-miR-4715-3p 0 1 0
chr19:39377498|39377644 hsa-miR-6776-3p 0 1 0
chr19:39377498|39377644 hsa-miR-3922-5p 0 1 0
chr19:39377498|39377644 hsa-miR-5195-5p 0 1 0
chr19:39377498|39377644 hsa-miR-3675-5p 0 1 0
chr19:39377498|39377644 hsa-miR-10396a-3p 0 1 0
chr19:39377498|39377644 hsa-miR-10396b-3p 0 1 0
chr19:39377498|39377644 hsa-miR-6792-3p 0 1 0
chr19:39377498|39377644 hsa-miR-6511b-3p 1 1 0
chr19:39377498|39377644 hsa-miR-10394-5p 0 1 0
chr19:39377498|39377644 hsa-miR-4691-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:39377498|39377644
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLP
Nucleotide Sequence CTGCAGGAGCTGCAGCAGATCATCATCACTCCCATCAAGGCCTACAGTGTCCTCCAGGCCACCGTGGCTGCCGCCACCACCACCCCTACTGCCAAGGATGGGGCCCCGGGGGAACCACCGCTGCCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites