CircRNA Information

General Information
circRNA Basic Information
CircID chr19:39468826|39469172
Strand +
CircType exon
Host Gene ENSG00000196235.12;
Algorism CIRI2;
Sequence CTGTGCTCTCAGTCACCACCTCCAGGTCAATGCCCTCTGGCTGGTCCTCAAACTTTTCCAGCTCAGAGAGTGTTGGCTTCACACCCTCCGTGATCTAAGCCCCCAGCGGTGAGGGGAAGAGAAGGAAATGGACCGAGGTCAGTGCAACAGCCCAGCTGAGTGGGCTGAGTGGGTCCTAGGGGAATAATTCTCCTAGGGAACACTCCTAACTTGAGGAGTGGGACAGAACCAGATAACCCACAGCCCAGGGCATCACCTGCAGGAGAACACTCACACCACCCCCATTACCAACACCCCTCTGGGACCCTCACCACAGCAGACATGGCGAAGCTCTTGAACAGAAAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:39468826|39469172 hsa-miR-192-5p 0 0 1
chr19:39468826|39469172 hsa-miR-192-3p 0 0 1
chr19:39468826|39469172 hsa-miR-215-5p 0 0 1
chr19:39468826|39469172 hsa-miR-215-3p 0 0 1
chr19:39468826|39469172 hsa-miR-122-5p 0 0 1
chr19:39468826|39469172 hsa-miR-122-3p 0 0 1
chr19:39468826|39469172 hsa-miR-134-5p 0 0 1
chr19:39468826|39469172 hsa-miR-134-3p 0 0 1
chr19:39468826|39469172 hsa-miR-335-5p 0 0 1
chr19:39468826|39469172 hsa-miR-335-3p 0 0 1
chr19:39468826|39469172 hsa-miR-346 0 0 1
chr19:39468826|39469172 hsa-miR-558 0 0 1
chr19:39468826|39469172 hsa-miR-561-5p 0 0 1
chr19:39468826|39469172 hsa-miR-561-3p 0 0 1
chr19:39468826|39469172 hsa-miR-608 1 1 1
chr19:39468826|39469172 hsa-miR-609 0 0 1
chr19:39468826|39469172 hsa-miR-619-5p 0 0 1
chr19:39468826|39469172 hsa-miR-619-3p 0 0 1
chr19:39468826|39469172 hsa-miR-631 0 0 1
chr19:39468826|39469172 hsa-miR-632 0 1 1
chr19:39468826|39469172 hsa-miR-637 1 1 1
chr19:39468826|39469172 hsa-miR-657 0 0 1
chr19:39468826|39469172 hsa-miR-874-5p 0 0 1
chr19:39468826|39469172 hsa-miR-874-3p 0 0 1
chr19:39468826|39469172 hsa-miR-942-5p 0 0 1
chr19:39468826|39469172 hsa-miR-942-3p 0 0 1
chr19:39468826|39469172 hsa-miR-944 0 0 1
chr19:39468826|39469172 hsa-miR-1236-5p 0 0 1
chr19:39468826|39469172 hsa-miR-1236-3p 0 0 1
chr19:39468826|39469172 hsa-miR-1237-5p 0 0 1
chr19:39468826|39469172 hsa-miR-1237-3p 0 0 1
chr19:39468826|39469172 hsa-miR-1205 0 1 1
chr19:39468826|39469172 hsa-miR-1293 0 1 1
chr19:39468826|39469172 hsa-miR-1304-5p 0 0 1
chr19:39468826|39469172 hsa-miR-1304-3p 0 0 1
chr19:39468826|39469172 hsa-miR-1248 0 0 1
chr19:39468826|39469172 hsa-miR-1256 0 0 1
chr19:39468826|39469172 hsa-miR-1258 0 0 1
chr19:39468826|39469172 hsa-miR-512-5p 0 0 1
chr19:39468826|39469172 hsa-miR-125a-3p 0 1 1
chr19:39468826|39469172 hsa-miR-1224-5p 0 1 1
chr19:39468826|39469172 hsa-miR-146b-3p 0 0 1
chr19:39468826|39469172 hsa-miR-574-5p 0 0 1
chr19:39468826|39469172 hsa-miR-1207-3p 0 0 1
chr19:39468826|39469172 hsa-miR-654-3p 0 1 1
chr19:39468826|39469172 hsa-miR-875-3p 0 0 1
chr19:39468826|39469172 hsa-miR-483-3p 0 0 1
chr19:39468826|39469172 hsa-miR-198 1 0 0
chr19:39468826|39469172 hsa-miR-612 1 0 0
chr19:39468826|39469172 hsa-miR-623 1 0 0
chr19:39468826|39469172 hsa-miR-760 1 0 0
chr19:39468826|39469172 hsa-miR-1182 1 1 0
chr19:39468826|39469172 hsa-miR-1183 1 0 0
chr19:39468826|39469172 hsa-miR-1268a 1 0 0
chr19:39468826|39469172 hsa-miR-4303 0 1 0
chr19:39468826|39469172 hsa-miR-4281 1 0 0
chr19:39468826|39469172 hsa-miR-3659 0 1 0
chr19:39468826|39469172 hsa-miR-3661 0 1 0
chr19:39468826|39469172 hsa-miR-3936 1 0 0
chr19:39468826|39469172 hsa-miR-1268b 1 0 0
chr19:39468826|39469172 hsa-miR-4466 1 0 0
chr19:39468826|39469172 hsa-miR-4483 0 1 0
chr19:39468826|39469172 hsa-miR-4488 1 0 0
chr19:39468826|39469172 hsa-miR-1587 1 1 0
chr19:39468826|39469172 hsa-miR-4651 1 1 0
chr19:39468826|39469172 hsa-miR-4656 1 0 0
chr19:39468826|39469172 hsa-miR-4658 0 1 0
chr19:39468826|39469172 hsa-miR-4675 0 1 0
chr19:39468826|39469172 hsa-miR-4710 1 1 0
chr19:39468826|39469172 hsa-miR-4721 1 0 0
chr19:39468826|39469172 hsa-miR-4741 0 1 0
chr19:39468826|39469172 hsa-miR-5194 1 1 0
chr19:39468826|39469172 hsa-miR-5787 1 0 0
chr19:39468826|39469172 hsa-miR-12119 1 0 0
chr19:39468826|39469172 hsa-miR-152-5p 0 1 0
chr19:39468826|39469172 hsa-miR-4731-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6747-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6861-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6825-5p 1 0 0
chr19:39468826|39469172 hsa-miR-4687-3p 1 0 0
chr19:39468826|39469172 hsa-miR-27a-5p 0 1 0
chr19:39468826|39469172 hsa-miR-6799-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6804-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6515-5p 0 1 0
chr19:39468826|39469172 hsa-miR-432-5p 0 1 0
chr19:39468826|39469172 hsa-miR-6716-5p 1 0 0
chr19:39468826|39469172 hsa-miR-659-3p 1 0 0
chr19:39468826|39469172 hsa-miR-6748-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6772-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6793-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6868-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6732-5p 1 0 0
chr19:39468826|39469172 hsa-miR-23a-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6782-5p 1 1 0
chr19:39468826|39469172 hsa-miR-7855-5p 1 1 0
chr19:39468826|39469172 hsa-miR-5008-5p 1 0 0
chr19:39468826|39469172 hsa-miR-615-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6786-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6835-5p 1 0 0
chr19:39468826|39469172 hsa-miR-7109-5p 1 0 0
chr19:39468826|39469172 hsa-miR-1226-5p 1 1 0
chr19:39468826|39469172 hsa-miR-3944-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4786-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6757-3p 1 0 0
chr19:39468826|39469172 hsa-miR-6809-3p 0 1 0
chr19:39468826|39469172 hsa-miR-3648 1 0 0
chr19:39468826|39469172 hsa-miR-4787-5p 1 0 0
chr19:39468826|39469172 hsa-miR-2681-3p 0 1 0
chr19:39468826|39469172 hsa-miR-3616-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6742-3p 1 0 0
chr19:39468826|39469172 hsa-miR-7843-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6825-3p 1 0 0
chr19:39468826|39469172 hsa-miR-6895-5p 0 1 0
chr19:39468826|39469172 hsa-miR-525-5p 0 1 0
chr19:39468826|39469172 hsa-miR-1180-5p 0 1 0
chr19:39468826|39469172 hsa-miR-3160-5p 0 1 0
chr19:39468826|39469172 hsa-miR-503-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4746-5p 1 0 0
chr19:39468826|39469172 hsa-miR-25-3p 0 1 0
chr19:39468826|39469172 hsa-miR-4433a-5p 0 1 0
chr19:39468826|39469172 hsa-miR-4750-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4433b-5p 0 1 0
chr19:39468826|39469172 hsa-miR-6790-3p 1 0 0
chr19:39468826|39469172 hsa-miR-3156-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6775-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6737-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6752-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6756-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6803-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6819-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6842-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6851-5p 1 1 0
chr19:39468826|39469172 hsa-miR-7110-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6722-3p 1 0 0
chr19:39468826|39469172 hsa-miR-6751-5p 1 1 0
chr19:39468826|39469172 hsa-miR-7111-5p 1 0 0
chr19:39468826|39469172 hsa-miR-320a-5p 0 1 0
chr19:39468826|39469172 hsa-miR-3620-5p 1 1 0
chr19:39468826|39469172 hsa-miR-10526-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4701-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4726-5p 1 0 0
chr19:39468826|39469172 hsa-miR-4745-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6738-5p 1 0 0
chr19:39468826|39469172 hsa-miR-6846-5p 1 1 0
chr19:39468826|39469172 hsa-miR-6848-5p 1 1 0
chr19:39468826|39469172 hsa-miR-4664-5p 1 0 0
chr19:39468826|39469172 hsa-miR-1914-3p 1 0 0
chr19:39468826|39469172 hsa-miR-4665-5p 1 0 0
chr19:39468826|39469172 hsa-miR-3689d 1 1 0
chr19:39468826|39469172 hsa-miR-6790-5p 0 1 0
chr19:39468826|39469172 hsa-miR-3059-5p 0 1 0
chr19:39468826|39469172 hsa-miR-7114-3p 0 1 0
chr19:39468826|39469172 hsa-miR-6783-3p 1 0 0
chr19:39468826|39469172 hsa-miR-505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:39468826|39469172
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence LCSQSPPPGQCPLAGPQTFPAQRVLASHPP
Nucleotide Sequence CTGTGCTCTCAGTCACCACCTCCAGGTCAATGCCCTCTGGCTGGTCCTCAAACTTTTCCAGCTCAGAGAGTGTTGGCTTCACACCCTCCGTGA

CircID chr19:39468826|39469172
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MRSGTEPDNPQPRASPAGEHSHHPHYQHPSGTLTTADMAKLLNRK
Nucleotide Sequence TTGAGGAGTGGGACAGAACCAGATAACCCACAGCCCAGGGCATCACCTGCAGGAGAACACTCACACCACCCCCATTACCAACACCCCTCTGGGACCCTCACCACAGCAGACATGGCGAAGCTCTTGAACAGAAAG

CircID chr19:39468826|39469172
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MQENTHTTPITNTPLGPSPQQTWRSS
Nucleotide Sequence CTGCAGGAGAACACTCACACCACCCCCATTACCAACACCCCTCTGGGACCCTCACCACAGCAGACATGGCGAAGCTCTTGA

CircID chr19:39468826|39469172
ORF Type ORF4
Protein Length 61
Nucleotide Length 186
Protein Sequence MGCGLSGSVPLLKLGVFPRRIIPLGPTQPTQLGCCTDLGPFPSLPLTAGGLDHGGCEANTL
Nucleotide Sequence CTGGGCTGTGGGTTATCTGGTTCTGTCCCACTCCTCAAGTTAGGAGTGTTCCCTAGGAGAATTATTCCCCTAGGACCCACTCAGCCCACTCAGCTGGGCTGTTGCACTGACCTCGGTCCATTTCCTTCTCTTCCCCTCACCGCTGGGGGCTTAGATCACGGAGGGTGTGAAGCCAACACTCTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites