CircNet

General Information

circRNA Basic Information

CircID	chr19:3977273\|3982052
Strand	-
CircType	exon
Host Gene	ENSG00000167658.14;
Algorism	CIRI2;
Sequence	CTGGGATTTCTCTATCAGTTTTGCTGTCTCCTCTTTCTTGAAATTCATGATCGCATCAAACACCTTGAAGATGGGGTCCAGGATCAGCTGGCAGAAGGTGCGTGGCAGCTTCTTCCCTTCGGGGCTGGTGGCTGACTTGCTGAACTTGCCGTTGGCTGGGTCAAAGTAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:3977273\|3982052	hsa-miR-22-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-22-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-498-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-498-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-539-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-539-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-545-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-545-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-583	0	0	1
chr19:3977273\|3982052	hsa-miR-605-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-605-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-1323	0	0	1
chr19:3977273\|3982052	hsa-miR-1226-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-1226-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-1237-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-1237-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-1202	0	1	1
chr19:3977273\|3982052	hsa-miR-548e-5p	0	0	1
chr19:3977273\|3982052	hsa-miR-548e-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-548o-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-548p	0	0	1
chr19:3977273\|3982052	hsa-miR-548o	0	0	1
chr19:3977273\|3982052	hsa-miR-548a-3p	0	0	1
chr19:3977273\|3982052	hsa-miR-548f	0	0	1
chr19:3977273\|3982052	hsa-miR-3916	1	0	0
chr19:3977273\|3982052	hsa-miR-4689	1	0	0
chr19:3977273\|3982052	hsa-miR-4784	0	1	0
chr19:3977273\|3982052	hsa-miR-5091	0	1	0
chr19:3977273\|3982052	hsa-miR-7515	0	1	0
chr19:3977273\|3982052	hsa-miR-9500	0	1	0
chr19:3977273\|3982052	hsa-miR-12121	0	1	0
chr19:3977273\|3982052	hsa-miR-3157-5p	0	1	0
chr19:3977273\|3982052	hsa-miR-224-5p	0	1	0
chr19:3977273\|3982052	hsa-miR-139-3p	1	0	0
chr19:3977273\|3982052	hsa-miR-3150b-3p	0	1	0
chr19:3977273\|3982052	hsa-miR-877-5p	1	0	0
chr19:3977273\|3982052	hsa-miR-3690	0	1	0
chr19:3977273\|3982052	hsa-miR-6738-3p	0	1	0
chr19:3977273\|3982052	hsa-miR-3151-3p	0	1	0
chr19:3977273\|3982052	hsa-miR-4727-5p	0	1	0
chr19:3977273\|3982052	hsa-miR-6797-5p	0	1	0
chr19:3977273\|3982052	hsa-miR-6856-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:3977273\|3982052
ORF Type	ORF1
Protein Length	44
Nucleotide Length	135
Protein Sequence	LGFLYQFCCLLFLEIHDRIKHLEDGVQDQLAEGAWQLLPFGAGG
Nucleotide Sequence	CTGGGATTTCTCTATCAGTTTTGCTGTCTCCTCTTTCTTGAAATTCATGATCGCATCAAACACCTTGAAGATGGGGTCCAGGATCAGCTGGCAGAAGGTGCGTGGCAGCTTCTTCCCTTCGGGGCTGGTGGCTGA

CircID	chr19:3977273\|3982052
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MKFMIASNTLKMGSRISWQKVRGSFFPSGLVADLLNLPLAGSKY
Nucleotide Sequence	TTGAAATTCATGATCGCATCAAACACCTTGAAGATGGGGTCCAGGATCAGCTGGCAGAAGGTGCGTGGCAGCTTCTTCCCTTCGGGGCTGGTGGCTGACTTGCTGAACTTGCCGTTGGCTGGGTCAAAGTAC

CircID	chr19:3977273\|3982052
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MPRTFCQLILDPIFKVFDAIMNFKKEETAKLIEKSQ
Nucleotide Sequence	CTGCCACGCACCTTCTGCCAGCTGATCCTGGACCCCATCTTCAAGGTGTTTGATGCGATCATGAATTTCAAGAAAGAGGAGACAGCAAAACTGATAGAGAAATCCCAG

CircID	chr19:3977273\|3982052
ORF Type	ORF4
Protein Length	26
Nucleotide Length	81
Protein Sequence	MTQPTASSASQPPAPKGRSCHAPSAS
Nucleotide Sequence	TTGACCCAGCCAACGGCAAGTTCAGCAAGTCAGCCACCAGCCCCGAAGGGAAGAAGCTGCCACGCACCTTCTGCCAGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information