CircRNA Information

General Information
circRNA Basic Information
CircID chr19:39840281|39840489
Strand +
CircType exon
Host Gene ENSG00000105202.6;
Algorism CIRI2;
Sequence CGGGGTCGTGGTCGGGGAGGAAAAAGAGGAAACCAGTCGGGGAAGAATGTGATGGTGGAGCCGCATCGGCATGAGGGTGAGTGAGGAAGGCAGGGAGCCGGCTGAGCTTCGGGGCAGGGAGAGGCTGGGGGTCCTCACCCCTGCTCTGATCCCCTCACCCAGGTGTCTTCATTTGTCGAGGAAAGGAAGATGCACTGGTCACCAAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:39840281|39840489 hsa-miR-23a-5p 0 0 1
chr19:39840281|39840489 hsa-miR-23a-3p 0 0 1
chr19:39840281|39840489 hsa-miR-148a-5p 0 0 1
chr19:39840281|39840489 hsa-miR-148a-3p 0 0 1
chr19:39840281|39840489 hsa-miR-23b-5p 0 0 1
chr19:39840281|39840489 hsa-miR-23b-3p 0 0 1
chr19:39840281|39840489 hsa-miR-152-5p 0 0 1
chr19:39840281|39840489 hsa-miR-152-3p 0 0 1
chr19:39840281|39840489 hsa-miR-383-5p 0 0 1
chr19:39840281|39840489 hsa-miR-383-3p 0 0 1
chr19:39840281|39840489 hsa-miR-148b-5p 0 0 1
chr19:39840281|39840489 hsa-miR-148b-3p 0 0 1
chr19:39840281|39840489 hsa-miR-1238-5p 0 0 1
chr19:39840281|39840489 hsa-miR-1238-3p 0 0 1
chr19:39840281|39840489 hsa-miR-1262 0 0 1
chr19:39840281|39840489 hsa-miR-1825 0 1 1
chr19:39840281|39840489 hsa-miR-1224-5p 0 0 1
chr19:39840281|39840489 hsa-miR-423-5p 0 0 1
chr19:39840281|39840489 hsa-miR-361-3p 0 0 1
chr19:39840281|39840489 hsa-miR-324-3p 0 0 1
chr19:39840281|39840489 hsa-miR-642 0 0 1
chr19:39840281|39840489 hsa-miR-638 0 1 0
chr19:39840281|39840489 hsa-miR-1913 0 1 0
chr19:39840281|39840489 hsa-miR-1976 1 0 0
chr19:39840281|39840489 hsa-miR-2278 0 1 0
chr19:39840281|39840489 hsa-miR-718 1 0 0
chr19:39840281|39840489 hsa-miR-1273c 0 1 0
chr19:39840281|39840489 hsa-miR-4326 1 0 0
chr19:39840281|39840489 hsa-miR-3685 1 0 0
chr19:39840281|39840489 hsa-miR-4450 0 1 0
chr19:39840281|39840489 hsa-miR-4710 0 1 0
chr19:39840281|39840489 hsa-miR-4751 0 1 0
chr19:39840281|39840489 hsa-miR-5193 0 1 0
chr19:39840281|39840489 hsa-miR-9903 1 0 0
chr19:39840281|39840489 hsa-miR-127-5p 0 1 0
chr19:39840281|39840489 hsa-miR-6749-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6734-5p 0 1 0
chr19:39840281|39840489 hsa-miR-6747-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6836-3p 1 0 0
chr19:39840281|39840489 hsa-miR-149-5p 1 1 0
chr19:39840281|39840489 hsa-miR-6822-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6881-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6510-5p 0 1 0
chr19:39840281|39840489 hsa-miR-7851-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6875-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6873-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6849-3p 0 1 0
chr19:39840281|39840489 hsa-miR-1915-5p 1 1 0
chr19:39840281|39840489 hsa-miR-6832-3p 1 0 0
chr19:39840281|39840489 hsa-miR-877-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6782-5p 0 1 0
chr19:39840281|39840489 hsa-miR-7855-5p 1 1 0
chr19:39840281|39840489 hsa-miR-6735-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6740-3p 1 0 0
chr19:39840281|39840489 hsa-miR-7109-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6884-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6763-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6894-3p 1 0 0
chr19:39840281|39840489 hsa-miR-7113-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6809-3p 0 1 0
chr19:39840281|39840489 hsa-miR-7111-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6780a-3p 1 0 0
chr19:39840281|39840489 hsa-miR-5196-3p 1 0 0
chr19:39840281|39840489 hsa-miR-339-5p 1 0 0
chr19:39840281|39840489 hsa-miR-4707-5p 1 0 0
chr19:39840281|39840489 hsa-miR-1236-3p 1 0 0
chr19:39840281|39840489 hsa-miR-7106-3p 0 1 0
chr19:39840281|39840489 hsa-miR-3180-5p 1 0 0
chr19:39840281|39840489 hsa-miR-6867-3p 0 1 0
chr19:39840281|39840489 hsa-miR-670-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6741-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6752-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6872-3p 1 0 0
chr19:39840281|39840489 hsa-miR-671-3p 1 0 0
chr19:39840281|39840489 hsa-miR-5088-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6859-3p 0 1 0
chr19:39840281|39840489 hsa-miR-937-3p 1 0 0
chr19:39840281|39840489 hsa-miR-3124-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6883-3p 1 0 0
chr19:39840281|39840489 hsa-miR-7152-5p 1 0 0
chr19:39840281|39840489 hsa-miR-3173-5p 1 0 0
chr19:39840281|39840489 hsa-miR-6734-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6846-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6812-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6750-3p 1 0 0
chr19:39840281|39840489 hsa-miR-3680-5p 1 0 0
chr19:39840281|39840489 hsa-miR-6885-3p 1 0 0
chr19:39840281|39840489 hsa-miR-885-5p 0 1 0
chr19:39840281|39840489 hsa-miR-6722-3p 0 1 0
chr19:39840281|39840489 hsa-miR-1909-3p 0 1 0
chr19:39840281|39840489 hsa-miR-4701-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6736-5p 0 1 0
chr19:39840281|39840489 hsa-miR-6877-3p 0 1 0
chr19:39840281|39840489 hsa-miR-10398-5p 1 1 0
chr19:39840281|39840489 hsa-miR-4722-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6727-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6862-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6801-3p 1 0 0
chr19:39840281|39840489 hsa-miR-6810-3p 1 0 0
chr19:39840281|39840489 hsa-miR-3928-5p 0 1 0
chr19:39840281|39840489 hsa-miR-3059-5p 1 1 0
chr19:39840281|39840489 hsa-miR-6819-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6823-3p 0 1 0
chr19:39840281|39840489 hsa-miR-6781-3p 1 0 0
chr19:39840281|39840489 hsa-miR-4769-3p 1 1 0
chr19:39840281|39840489 hsa-miR-6806-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:39840281|39840489
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MVTSASSFPSCRCGSTITFFPDWFPLFPPRPRP
Nucleotide Sequence TTGGTGACCAGTGCATCTTCCTTTCCCTCATGCCGATGCGGCTCCACCATCACATTCTTCCCCGACTGGTTTCCTCTTTTTCCTCCCCGACCACGACCC

CircID chr19:39840281|39840489
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MRVSEEGREPAELRGRERLGVLTPALIPSPRCLHLSRKGRCTGHQE
Nucleotide Sequence ATGAGGGTGAGTGAGGAAGGCAGGGAGCCGGCTGAGCTTCGGGGCAGGGAGAGGCTGGGGGTCCTCACCCCTGCTCTGATCCCCTCACCCAGGTGTCTTCATTTGTCGAGGAAAGGAAGATGCACTGGTCACCAAGAA

CircID chr19:39840281|39840489
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MGEGIRAGVRTPSLSLPRSSAGSLPSSLTLMPMRLHHHILPRLVSSFSSPTTTP
Nucleotide Sequence CTGGGTGAGGGGATCAGAGCAGGGGTGAGGACCCCCAGCCTCTCCCTGCCCCGAAGCTCAGCCGGCTCCCTGCCTTCCTCACTCACCCTCATGCCGATGCGGCTCCACCATCACATTCTTCCCCGACTGGTTTCCTCTTTTTCCTCCCCGACCACGACCCCG

CircID chr19:39840281|39840489
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MVTSASSFPRQMKTPSCRCGSTITFFPDWFPLFPPRPRP
Nucleotide Sequence TTGGTGACCAGTGCATCTTCCTTTCCTCGACAAATGAAGACACCCTCATGCCGATGCGGCTCCACCATCACATTCTTCCCCGACTGGTTTCCTCTTTTTCCTCCCCGACCACGACCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites