CircNet

General Information

circRNA Basic Information

CircID	chr19:39873462\|39873647
Strand	+
CircType	exon
Host Gene	ENSG00000275395.3;
Algorism	CIRI2;
Sequence	CTGCGTACCCGTGGGCCAGTGTGGCTGCCTCCATGATGGCCGCTACTACCCACTGGGCGAGGTCTTCTACCCGGGCCCTGAGTGTGAGCGGCGCTGTGAGTGTGGGCCAGGTGGCCATGTCACCTGCCAGGAGGGCGCAGCCTGTGGGCCCCATGAGGAGTGCCGGTTAGAGGATGGTGTCCAGGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:39873462\|39873647	hsa-miR-193b-5p	0	0	1
chr19:39873462\|39873647	hsa-miR-193b-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-510-5p	0	0	1
chr19:39873462\|39873647	hsa-miR-510-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-588	0	0	1
chr19:39873462\|39873647	hsa-miR-604	0	0	1
chr19:39873462\|39873647	hsa-miR-650	0	1	1
chr19:39873462\|39873647	hsa-miR-1266-5p	0	0	1
chr19:39873462\|39873647	hsa-miR-1266-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-1827	0	0	1
chr19:39873462\|39873647	hsa-miR-125a-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-490-5p	0	0	1
chr19:39873462\|39873647	hsa-miR-1207-5p	0	0	1
chr19:39873462\|39873647	hsa-miR-483-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-342-3p	0	0	1
chr19:39873462\|39873647	hsa-miR-193a-3p	0	1	1
chr19:39873462\|39873647	hsa-miR-1308	0	0	1
chr19:39873462\|39873647	hsa-miR-1254	0	0	1
chr19:39873462\|39873647	hsa-miR-612	1	0	0
chr19:39873462\|39873647	hsa-miR-631	0	1	0
chr19:39873462\|39873647	hsa-miR-661	1	1	0
chr19:39873462\|39873647	hsa-miR-762	1	0	0
chr19:39873462\|39873647	hsa-miR-2861	1	0	0
chr19:39873462\|39873647	hsa-miR-3132	1	1	0
chr19:39873462\|39873647	hsa-miR-3195	1	0	0
chr19:39873462\|39873647	hsa-miR-3918	0	1	0
chr19:39873462\|39873647	hsa-miR-4674	1	0	0
chr19:39873462\|39873647	hsa-miR-4736	0	1	0
chr19:39873462\|39873647	hsa-miR-8073	0	1	0
chr19:39873462\|39873647	hsa-miR-9899	1	0	0
chr19:39873462\|39873647	hsa-miR-4747-3p	1	0	0
chr19:39873462\|39873647	hsa-miR-197-5p	0	1	0
chr19:39873462\|39873647	hsa-miR-6765-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-1343-3p	1	0	0
chr19:39873462\|39873647	hsa-miR-4640-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-4691-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-6757-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-3127-5p	0	1	0
chr19:39873462\|39873647	hsa-miR-6749-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-2681-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-4638-3p	1	1	0
chr19:39873462\|39873647	hsa-miR-3690	0	1	0
chr19:39873462\|39873647	hsa-miR-194-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-1225-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-6743-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-660-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-6804-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-4529-5p	0	1	0
chr19:39873462\|39873647	hsa-miR-449b-3p	0	1	0
chr19:39873462\|39873647	hsa-miR-10400-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-6769a-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-328-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-6724-5p	1	0	0
chr19:39873462\|39873647	hsa-miR-4701-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:39873462\|39873647
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MGEVFYPGPECERRCECGPGGHVTCQEGAACGPHEECRLEDGVQ
Nucleotide Sequence	CTGGGCGAGGTCTTCTACCCGGGCCCTGAGTGTGAGCGGCGCTGTGAGTGTGGGCCAGGTGGCCATGTCACCTGCCAGGAGGGCGCAGCCTGTGGGCCCCATGAGGAGTGCCGGTTAGAGGATGGTGTCCAG

CircID	chr19:39873462\|39873647
ORF Type	ORF2
Protein Length	45
Nucleotide Length	138
Protein Sequence	MMAATTHWARSSTRALSVSGAVSVGQVAMSPARRAQPVGPMRSAG
Nucleotide Sequence	ATGATGGCCGCTACTACCCACTGGGCGAGGTCTTCTACCCGGGCCCTGAGTGTGAGCGGCGCTGTGAGTGTGGGCCAGGTGGCCATGTCACCTGCCAGGAGGGCGCAGCCTGTGGGCCCCATGAGGAGTGCCGGTTAG

CircID	chr19:39873462\|39873647
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MAHTHSAAHTQGPGRRPRPVGSSGHHGGSHTGPRVR
Nucleotide Sequence	CTGGCCCACACTCACAGCGCCGCTCACACTCAGGGCCCGGGTAGAAGACCTCGCCCAGTGGGTAGTAGCGGCCATCATGGAGGCAGCCACACTGGCCCACGGGTACGC

CircID	chr19:39873462\|39873647
ORF Type	ORF4
Protein Length	51
Nucleotide Length	153
Protein Sequence	MGPTGCALLAGDMATWPTLTAPLTLRARVEDLAQWVVAAIMEAATLAHGYA
Nucleotide Sequence	ATGGGGCCCACAGGCTGCGCCCTCCTGGCAGGTGACATGGCCACCTGGCCCACACTCACAGCGCCGCTCACACTCAGGGCCCGGGTAGAAGACCTCGCCCAGTGGGTAGTAGCGGCCATCATGGAGGCAGCCACACTGGCCCACGGGTACGCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information