CircNet

General Information

circRNA Basic Information

CircID	chr19:40242542\|40242689
Strand	+
CircType	exon
Host Gene	ENSG00000105221.15;
Algorism	CIRI2;
Sequence	AGGGAGGAGTGGATGCGGGCCATCCAGATGGTCGCCAACAGCCTCAAGCAGCGGGCCCCAGGCGAGGACCCCATGGACTACAAGTGTGGCTCCCCCAGTGACTCCTCCACGACTGAGGAGATGGAAGTGGCGGTCAGCAAGGCACGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:40242542\|40242689	hsa-miR-625-5p	0	0	1
chr19:40242542\|40242689	hsa-miR-625-3p	0	0	1
chr19:40242542\|40242689	hsa-miR-637	0	0	1
chr19:40242542\|40242689	hsa-miR-661	1	1	1
chr19:40242542\|40242689	hsa-miR-765	0	0	1
chr19:40242542\|40242689	hsa-miR-939-5p	0	0	1
chr19:40242542\|40242689	hsa-miR-939-3p	0	0	1
chr19:40242542\|40242689	hsa-miR-1304-5p	0	0	1
chr19:40242542\|40242689	hsa-miR-1304-3p	0	0	1
chr19:40242542\|40242689	hsa-miR-1275	0	0	1
chr19:40242542\|40242689	hsa-miR-615-5p	1	1	1
chr19:40242542\|40242689	hsa-miR-485-5p	0	1	1
chr19:40242542\|40242689	hsa-miR-628-5p	0	0	1
chr19:40242542\|40242689	hsa-miR-483-3p	0	1	1
chr19:40242542\|40242689	hsa-miR-1273	0	0	1
chr19:40242542\|40242689	hsa-miR-638	1	0	0
chr19:40242542\|40242689	hsa-miR-4440	0	1	0
chr19:40242542\|40242689	hsa-miR-5698	0	1	0
chr19:40242542\|40242689	hsa-miR-5787	1	0	0
chr19:40242542\|40242689	hsa-miR-7704	1	0	0
chr19:40242542\|40242689	hsa-miR-8089	1	0	0
chr19:40242542\|40242689	hsa-miR-432-3p	0	1	0
chr19:40242542\|40242689	hsa-miR-128-1-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-4731-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-6765-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-4687-3p	0	1	0
chr19:40242542\|40242689	hsa-miR-7847-3p	0	1	0
chr19:40242542\|40242689	hsa-miR-1915-5p	1	1	0
chr19:40242542\|40242689	hsa-miR-185-3p	1	0	0
chr19:40242542\|40242689	hsa-miR-6827-5p	1	1	0
chr19:40242542\|40242689	hsa-miR-6798-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-6788-3p	0	1	0
chr19:40242542\|40242689	hsa-miR-4436b-5p	0	1	0
chr19:40242542\|40242689	hsa-miR-1343-3p	1	1	0
chr19:40242542\|40242689	hsa-miR-3944-3p	1	0	0
chr19:40242542\|40242689	hsa-miR-6749-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-1296-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-328-3p	1	0	0
chr19:40242542\|40242689	hsa-miR-431-5p	0	1	0
chr19:40242542\|40242689	hsa-miR-6726-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-6848-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-4723-5p	0	1	0
chr19:40242542\|40242689	hsa-miR-1914-3p	1	0	0
chr19:40242542\|40242689	hsa-miR-6724-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-6791-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-6762-5p	1	0	0
chr19:40242542\|40242689	hsa-miR-10401-3p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:40242542\|40242689
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MRAIQMVANSLKQRAPGEDPMDYKCGSPSDSSTTEEMEVAVSKAR
Nucleotide Sequence	ATGCGGGCCATCCAGATGGTCGCCAACAGCCTCAAGCAGCGGGCCCCAGGCGAGGACCCCATGGACTACAAGTGTGGCTCCCCCAGTGACTCCTCCACGACTGAGGAGATGGAAGTGGCGGTCAGCAAGGCACGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information