CircNet

General Information

circRNA Basic Information

CircID	chr19:40371679\|40374505
Strand	+
CircType	exon
Host Gene	ENSG00000105223.17;
Algorism	CIRI2;
Sequence	TTGGACACAGGGGTGGGGGCGCACTCGCCAGGTAGGCCAGAGCAGGGGTTCCATTGAGGCAGATCTCCATTGGTGTCTCTTGGTTGTAGCGGGTGTCATAGAACCGGGGCCAAGTTGATGGGATGGAGCTGCCTGCCTGGCCCAGGAACCAGTAGGCCTCAAAGATCTTGGTCAGGTCTCGAGCCAGGCAGCTGCAGTTGTACATGACCACGCCCAGCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:40371679\|40374505	hsa-miR-22-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-22-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-149-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-149-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-328-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-328-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-425-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-425-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-585-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-585-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-619-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-619-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-620	0	0	1
chr19:40371679\|40374505	hsa-miR-661	0	0	1
chr19:40371679\|40374505	hsa-miR-1301-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-1301-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-940	0	1	1
chr19:40371679\|40374505	hsa-miR-1304-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-1304-3p	0	0	1
chr19:40371679\|40374505	hsa-miR-1270	0	0	1
chr19:40371679\|40374505	hsa-miR-769-5p	0	1	1
chr19:40371679\|40374505	hsa-miR-1184	0	1	1
chr19:40371679\|40374505	hsa-miR-671-3p	0	1	1
chr19:40371679\|40374505	hsa-miR-509-3-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-509-5p	0	0	1
chr19:40371679\|40374505	hsa-miR-1268	0	0	1
chr19:40371679\|40374505	hsa-miR-1254	0	0	1
chr19:40371679\|40374505	hsa-miR-346	1	0	0
chr19:40371679\|40374505	hsa-miR-612	1	0	0
chr19:40371679\|40374505	hsa-miR-614	1	0	0
chr19:40371679\|40374505	hsa-miR-631	0	1	0
chr19:40371679\|40374505	hsa-miR-663a	1	0	0
chr19:40371679\|40374505	hsa-miR-1268a	1	1	0
chr19:40371679\|40374505	hsa-miR-1913	1	0	0
chr19:40371679\|40374505	hsa-miR-1268b	1	1	0
chr19:40371679\|40374505	hsa-miR-4673	0	1	0
chr19:40371679\|40374505	hsa-miR-5047	0	1	0
chr19:40371679\|40374505	hsa-miR-9898	1	0	0
chr19:40371679\|40374505	hsa-miR-152-5p	1	1	0
chr19:40371679\|40374505	hsa-miR-6765-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-6836-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-218-1-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-187-5p	0	1	0
chr19:40371679\|40374505	hsa-miR-6089	1	0	0
chr19:40371679\|40374505	hsa-miR-1225-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-296-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-182-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-6728-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-6821-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-6882-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-1343-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-4783-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-4640-5p	0	1	0
chr19:40371679\|40374505	hsa-miR-5001-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-7161-3p	1	1	0
chr19:40371679\|40374505	hsa-miR-4783-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-6736-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-4640-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-6769a-3p	0	1	0
chr19:40371679\|40374505	hsa-miR-6889-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-4749-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-1292-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-371b-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-6842-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-6808-5p	0	1	0
chr19:40371679\|40374505	hsa-miR-6729-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-3187-5p	1	0	0
chr19:40371679\|40374505	hsa-miR-10396a-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-10396b-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-6791-5p	0	1	0
chr19:40371679\|40374505	hsa-miR-6805-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-6810-3p	1	1	0
chr19:40371679\|40374505	hsa-miR-10392-3p	1	0	0
chr19:40371679\|40374505	hsa-miR-3922-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:40371679\|40374505
ORF Type	ORF1
Protein Length	45
Nucleotide Length	138
Protein Sequence	MVSLGCSGCHRTGAKLMGWSCLPGPGTSRPQRSWSGLEPGSCSCT
Nucleotide Sequence	TTGGTGTCTCTTGGTTGTAGCGGGTGTCATAGAACCGGGGCCAAGTTGATGGGATGGAGCTGCCTGCCTGGCCCAGGAACCAGTAGGCCTCAAAGATCTTGGTCAGGTCTCGAGCCAGGCAGCTGCAGTTGTACATGA

CircID	chr19:40371679\|40374505
ORF Type	ORF2
Protein Length	28
Nucleotide Length	84
Protein Sequence	MAQEPVGLKDLGQVSSQAAAVVHDHAQL
Nucleotide Sequence	CTGGCCCAGGAACCAGTAGGCCTCAAAGATCTTGGTCAGGTCTCGAGCCAGGCAGCTGCAGTTGTACATGACCACGCCCAGCTC

CircID	chr19:40371679\|40374505
ORF Type	ORF3
Protein Length	72
Nucleotide Length	216
Protein Sequence	MGVVMYNCSCLARDLTKIFEAYWFLGQAGSSIPSTWPRFYDTRYNQETPMEICLNGTPALAYLASAPPPLCP
Nucleotide Sequence	CTGGGCGTGGTCATGTACAACTGCAGCTGCCTGGCTCGAGACCTGACCAAGATCTTTGAGGCCTACTGGTTCCTGGGCCAGGCAGGCAGCTCCATCCCATCAACTTGGCCCCGGTTCTATGACACCCGCTACAACCAAGAGACACCAATGGAGATCTGCCTCAATGGAACCCCTGCTCTGGCCTACCTGGCGAGTGCGCCCCCACCCCTGTGTCCA

CircID	chr19:40371679\|40374505
ORF Type	ORF4
Protein Length	54
Nucleotide Length	162
Protein Sequence	MRPTGSWARQAAPSHQLGPGSMTPATTKRHQWRSASMEPLLWPTWRVRPHPCVQ
Nucleotide Sequence	TTGAGGCCTACTGGTTCCTGGGCCAGGCAGGCAGCTCCATCCCATCAACTTGGCCCCGGTTCTATGACACCCGCTACAACCAAGAGACACCAATGGAGATCTGCCTCAATGGAACCCCTGCTCTGGCCTACCTGGCGAGTGCGCCCCCACCCCTGTGTCCAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information