CircRNA Information

General Information
circRNA Basic Information
CircID chr19:4038502|4038628
Strand +
CircType exon
Host Gene ENSG00000105229.5;
Algorism CIRI2;
Sequence CCCCCCACGCCACACGGTGCCGCACCCTGGGCCCCCGCCTTCCCCGGGGGTTCCTGACCACACGCCGGGTCTTCAAAATACCAAATTATTGCACTTTCAAAAAATACAACACATCTGTGGCTAAACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:4038502|4038628 hsa-miR-17-5p 0 0 1
chr19:4038502|4038628 hsa-miR-17-3p 0 0 1
chr19:4038502|4038628 hsa-miR-20a-5p 0 0 1
chr19:4038502|4038628 hsa-miR-20a-3p 0 0 1
chr19:4038502|4038628 hsa-miR-93-5p 0 0 1
chr19:4038502|4038628 hsa-miR-93-3p 0 0 1
chr19:4038502|4038628 hsa-miR-106a-5p 0 0 1
chr19:4038502|4038628 hsa-miR-106a-3p 0 0 1
chr19:4038502|4038628 hsa-miR-130a-5p 0 0 1
chr19:4038502|4038628 hsa-miR-130a-3p 0 0 1
chr19:4038502|4038628 hsa-miR-106b-5p 0 0 1
chr19:4038502|4038628 hsa-miR-106b-3p 0 0 1
chr19:4038502|4038628 hsa-miR-301a-5p 0 0 1
chr19:4038502|4038628 hsa-miR-301a-3p 0 0 1
chr19:4038502|4038628 hsa-miR-130b-5p 0 0 1
chr19:4038502|4038628 hsa-miR-130b-3p 0 0 1
chr19:4038502|4038628 hsa-miR-20b-5p 0 0 1
chr19:4038502|4038628 hsa-miR-20b-3p 0 0 1
chr19:4038502|4038628 hsa-miR-488-5p 0 0 1
chr19:4038502|4038628 hsa-miR-488-3p 0 0 1
chr19:4038502|4038628 hsa-miR-519d-5p 0 0 1
chr19:4038502|4038628 hsa-miR-519d-3p 0 0 1
chr19:4038502|4038628 hsa-miR-454-5p 0 0 1
chr19:4038502|4038628 hsa-miR-454-3p 0 0 1
chr19:4038502|4038628 hsa-miR-675-5p 0 0 1
chr19:4038502|4038628 hsa-miR-675-3p 0 0 1
chr19:4038502|4038628 hsa-miR-873-5p 0 0 1
chr19:4038502|4038628 hsa-miR-873-3p 0 0 1
chr19:4038502|4038628 hsa-miR-301b-5p 0 0 1
chr19:4038502|4038628 hsa-miR-301b-3p 0 0 1
chr19:4038502|4038628 hsa-miR-129-5p 0 0 1
chr19:4038502|4038628 hsa-miR-941 0 1 1
chr19:4038502|4038628 hsa-miR-576-3p 0 0 1
chr19:4038502|4038628 hsa-miR-519b-3p 0 0 1
chr19:4038502|4038628 hsa-miR-519c-3p 0 0 1
chr19:4038502|4038628 hsa-miR-644 0 0 1
chr19:4038502|4038628 hsa-miR-663 0 0 1
chr19:4038502|4038628 hsa-miR-519a 0 0 1
chr19:4038502|4038628 hsa-miR-611 1 0 0
chr19:4038502|4038628 hsa-miR-663a 1 1 0
chr19:4038502|4038628 hsa-miR-762 1 0 0
chr19:4038502|4038628 hsa-miR-1268a 1 0 0
chr19:4038502|4038628 hsa-miR-3196 1 0 0
chr19:4038502|4038628 hsa-miR-1268b 1 0 0
chr19:4038502|4038628 hsa-miR-4466 1 1 0
chr19:4038502|4038628 hsa-miR-3960 1 0 0
chr19:4038502|4038628 hsa-miR-4706 1 0 0
chr19:4038502|4038628 hsa-miR-5192 1 0 0
chr19:4038502|4038628 hsa-miR-5787 1 0 0
chr19:4038502|4038628 hsa-miR-6075 1 0 0
chr19:4038502|4038628 hsa-miR-6125 1 0 0
chr19:4038502|4038628 hsa-miR-6126 1 1 0
chr19:4038502|4038628 hsa-miR-6765-5p 1 0 0
chr19:4038502|4038628 hsa-miR-7106-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6089 1 0 0
chr19:4038502|4038628 hsa-miR-6840-5p 0 1 0
chr19:4038502|4038628 hsa-miR-6727-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6805-5p 1 0 0
chr19:4038502|4038628 hsa-miR-1224-5p 1 0 0
chr19:4038502|4038628 hsa-miR-4793-3p 1 0 0
chr19:4038502|4038628 hsa-miR-6850-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6786-5p 1 0 0
chr19:4038502|4038628 hsa-miR-4640-5p 1 0 0
chr19:4038502|4038628 hsa-miR-1228-5p 1 0 0
chr19:4038502|4038628 hsa-miR-4787-5p 1 0 0
chr19:4038502|4038628 hsa-miR-149-3p 1 1 0
chr19:4038502|4038628 hsa-miR-1287-3p 1 0 0
chr19:4038502|4038628 hsa-miR-5587-3p 0 1 0
chr19:4038502|4038628 hsa-miR-10400-5p 1 0 0
chr19:4038502|4038628 hsa-miR-4763-3p 1 0 0
chr19:4038502|4038628 hsa-miR-6787-5p 0 1 0
chr19:4038502|4038628 hsa-miR-6870-5p 1 0 0
chr19:4038502|4038628 hsa-miR-1343-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6756-5p 1 0 0
chr19:4038502|4038628 hsa-miR-10401-5p 1 0 0
chr19:4038502|4038628 hsa-miR-1915-3p 0 1 0
chr19:4038502|4038628 hsa-miR-5196-5p 1 1 0
chr19:4038502|4038628 hsa-miR-6780b-5p 1 1 0
chr19:4038502|4038628 hsa-miR-10396b-5p 0 1 0
chr19:4038502|4038628 hsa-miR-1237-5p 1 0 0
chr19:4038502|4038628 hsa-miR-1909-3p 1 0 0
chr19:4038502|4038628 hsa-miR-4685-5p 1 0 0
chr19:4038502|4038628 hsa-miR-4725-3p 1 1 0
chr19:4038502|4038628 hsa-miR-6848-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6889-5p 1 1 0
chr19:4038502|4038628 hsa-miR-3085-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6785-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6790-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6762-5p 1 0 0
chr19:4038502|4038628 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:4038502|4038628
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MGPRLPRGFLTTRRVFKIPNYCTFKKYNTSVAK
Nucleotide Sequence CTGGGCCCCCGCCTTCCCCGGGGGTTCCTGACCACACGCCGGGTCTTCAAAATACCAAATTATTGCACTTTCAAAAAATACAACACATCTGTGGCTAAA

CircID chr19:4038502|4038628
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MKTRRVVRNPRGRRGPRVRHRVAWG
Nucleotide Sequence TTGAAGACCCGGCGTGTGGTCAGGAACCCCCGGGGAAGGCGGGGGCCCAGGGTGCGGCACCGTGTGGCGTGGGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites