CircRNA Information

General Information
circRNA Basic Information
CircID chr19:40796745|40796859
Strand -
CircType exon
Host Gene ENSG00000167578.15;
Algorism CIRI2;
Sequence CTGCTGCTGCTTCCTCTGTCTTGGCTAACGTCTGTCCCCCTGAACCCCTAACCATACCCCAAGAGCTCCCAAAGCCTGAGACCAGGGTCATTTGTCCCCAACTCCCCATCTGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:40796745|40796859 hsa-miR-15a-5p 0 0 1
chr19:40796745|40796859 hsa-miR-15a-3p 0 0 1
chr19:40796745|40796859 hsa-miR-15b-5p 0 0 1
chr19:40796745|40796859 hsa-miR-15b-3p 0 0 1
chr19:40796745|40796859 hsa-miR-195-5p 0 0 1
chr19:40796745|40796859 hsa-miR-195-3p 0 0 1
chr19:40796745|40796859 hsa-miR-424-5p 0 0 1
chr19:40796745|40796859 hsa-miR-424-3p 0 0 1
chr19:40796745|40796859 hsa-miR-484 0 0 1
chr19:40796745|40796859 hsa-miR-497-5p 0 0 1
chr19:40796745|40796859 hsa-miR-497-3p 0 0 1
chr19:40796745|40796859 hsa-miR-504-5p 0 0 1
chr19:40796745|40796859 hsa-miR-504-3p 0 0 1
chr19:40796745|40796859 hsa-miR-571 0 0 1
chr19:40796745|40796859 hsa-miR-584-5p 0 0 1
chr19:40796745|40796859 hsa-miR-584-3p 0 0 1
chr19:40796745|40796859 hsa-miR-635 0 0 1
chr19:40796745|40796859 hsa-miR-920 0 0 1
chr19:40796745|40796859 hsa-miR-939-5p 0 0 1
chr19:40796745|40796859 hsa-miR-939-3p 0 0 1
chr19:40796745|40796859 hsa-miR-1266-5p 0 0 1
chr19:40796745|40796859 hsa-miR-1266-3p 0 0 1
chr19:40796745|40796859 hsa-miR-16 0 0 1
chr19:40796745|40796859 hsa-miR-608 1 0 0
chr19:40796745|40796859 hsa-miR-637 1 0 0
chr19:40796745|40796859 hsa-miR-760 1 0 0
chr19:40796745|40796859 hsa-miR-1268a 1 0 0
chr19:40796745|40796859 hsa-miR-3125 0 1 0
chr19:40796745|40796859 hsa-miR-3138 1 0 0
chr19:40796745|40796859 hsa-miR-3139 1 0 0
chr19:40796745|40796859 hsa-miR-3154 1 1 0
chr19:40796745|40796859 hsa-miR-3170 1 0 0
chr19:40796745|40796859 hsa-miR-3188 1 0 0
chr19:40796745|40796859 hsa-miR-4298 1 0 0
chr19:40796745|40796859 hsa-miR-3911 1 0 0
chr19:40796745|40796859 hsa-miR-1268b 1 0 0
chr19:40796745|40796859 hsa-miR-4651 1 0 0
chr19:40796745|40796859 hsa-miR-4706 1 0 0
chr19:40796745|40796859 hsa-miR-4710 1 0 0
chr19:40796745|40796859 hsa-miR-5194 1 0 0
chr19:40796745|40796859 hsa-miR-5572 1 0 0
chr19:40796745|40796859 hsa-miR-5698 1 0 0
chr19:40796745|40796859 hsa-miR-5705 1 0 0
chr19:40796745|40796859 hsa-miR-5787 1 0 0
chr19:40796745|40796859 hsa-miR-6090 1 0 0
chr19:40796745|40796859 hsa-miR-8089 1 0 0
chr19:40796745|40796859 hsa-miR-12128 1 0 0
chr19:40796745|40796859 hsa-miR-6747-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6857-5p 1 0 0
chr19:40796745|40796859 hsa-miR-4687-3p 1 0 0
chr19:40796745|40796859 hsa-miR-6890-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6741-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6727-5p 1 0 0
chr19:40796745|40796859 hsa-miR-432-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6716-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6871-5p 0 1 0
chr19:40796745|40796859 hsa-miR-6772-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6793-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6796-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6732-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6827-5p 1 0 0
chr19:40796745|40796859 hsa-miR-23a-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6798-5p 1 1 0
chr19:40796745|40796859 hsa-miR-3126-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6881-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6782-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6810-5p 1 1 0
chr19:40796745|40796859 hsa-miR-6786-5p 1 0 0
chr19:40796745|40796859 hsa-miR-7109-5p 1 0 0
chr19:40796745|40796859 hsa-miR-1229-5p 1 0 0
chr19:40796745|40796859 hsa-miR-193b-5p 1 0 0
chr19:40796745|40796859 hsa-miR-296-3p 1 0 0
chr19:40796745|40796859 hsa-miR-6771-5p 1 0 0
chr19:40796745|40796859 hsa-miR-92b-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6847-5p 0 1 0
chr19:40796745|40796859 hsa-miR-149-3p 1 0 0
chr19:40796745|40796859 hsa-miR-6824-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6789-5p 1 0 0
chr19:40796745|40796859 hsa-miR-450a-2-3p 0 1 0
chr19:40796745|40796859 hsa-miR-5010-5p 1 0 0
chr19:40796745|40796859 hsa-miR-423-5p 1 0 0
chr19:40796745|40796859 hsa-miR-3191-3p 1 1 0
chr19:40796745|40796859 hsa-miR-3140-3p 1 0 0
chr19:40796745|40796859 hsa-miR-6812-5p 1 0 0
chr19:40796745|40796859 hsa-miR-1343-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6726-5p 1 1 0
chr19:40796745|40796859 hsa-miR-6737-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6743-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6752-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6756-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6769a-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6803-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6819-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6842-5p 1 0 0
chr19:40796745|40796859 hsa-miR-7110-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6751-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6763-5p 1 1 0
chr19:40796745|40796859 hsa-miR-6774-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6779-5p 1 0 0
chr19:40796745|40796859 hsa-miR-7111-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6780b-5p 1 0 0
chr19:40796745|40796859 hsa-miR-328-5p 1 0 0
chr19:40796745|40796859 hsa-miR-4749-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6777-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6794-5p 1 1 0
chr19:40796745|40796859 hsa-miR-6795-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6846-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6848-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6887-5p 1 1 0
chr19:40796745|40796859 hsa-miR-6889-5p 1 0 0
chr19:40796745|40796859 hsa-miR-4723-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6885-5p 1 0 0
chr19:40796745|40796859 hsa-miR-3940-5p 1 0 0
chr19:40796745|40796859 hsa-miR-4665-5p 1 0 0
chr19:40796745|40796859 hsa-miR-6855-5p 1 1 0
chr19:40796745|40796859 hsa-miR-7151-3p 1 0 0
chr19:40796745|40796859 hsa-miR-5591-5p 1 0 0
chr19:40796745|40796859 hsa-miR-769-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:40796745|40796859
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MANVCPPEPLTIPQELPKPETRVICPQLPIW
Nucleotide Sequence TTGGCTAACGTCTGTCCCCCTGAACCCCTAACCATACCCCAAGAGCTCCCAAAGCCTGAGACCAGGGTCATTTGTCCCCAACTCCCCATCTGG
CircID chr19:40796745|40796859
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MGSWGQMTLVSGFGSSWGMVRGSGGQTLAKTEEAAA
Nucleotide Sequence ATGGGGAGTTGGGGACAAATGACCCTGGTCTCAGGCTTTGGGAGCTCTTGGGGTATGGTTAGGGGTTCAGGGGGACAGACGTTAGCCAAGACAGAGGAAGCAGCAGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab