CircRNA Information

General Information
circRNA Basic Information
CircID chr19:40844652|40844767
Strand +
CircType exon
Host Gene ENSG00000255974.5;
Algorism CIRI2;
Sequence CGAAGTGTACCCTATGCTGGGCTCTGTGCTGAGAGACCCCAGTTTCTTCTCCAACCCCCAGGACTTCAATCCCCAGCACTTCCTGAATGAGAAGGGGCAGTTTAAGAAGAGTGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:40844652|40844767 hsa-miR-302a-5p 0 0 1
chr19:40844652|40844767 hsa-miR-302a-3p 0 0 1
chr19:40844652|40844767 hsa-miR-302b-5p 0 0 1
chr19:40844652|40844767 hsa-miR-302b-3p 0 0 1
chr19:40844652|40844767 hsa-miR-302c-5p 0 0 1
chr19:40844652|40844767 hsa-miR-302c-3p 0 0 1
chr19:40844652|40844767 hsa-miR-302d-5p 0 0 1
chr19:40844652|40844767 hsa-miR-302d-3p 0 0 1
chr19:40844652|40844767 hsa-miR-372-5p 0 0 1
chr19:40844652|40844767 hsa-miR-372-3p 0 0 1
chr19:40844652|40844767 hsa-miR-373-5p 0 0 1
chr19:40844652|40844767 hsa-miR-373-3p 0 0 1
chr19:40844652|40844767 hsa-miR-520e-5p 0 0 1
chr19:40844652|40844767 hsa-miR-520e-3p 0 0 1
chr19:40844652|40844767 hsa-miR-520b-5p 0 0 1
chr19:40844652|40844767 hsa-miR-520b-3p 0 0 1
chr19:40844652|40844767 hsa-miR-573 0 0 1
chr19:40844652|40844767 hsa-miR-620 0 0 1
chr19:40844652|40844767 hsa-miR-637 1 0 1
chr19:40844652|40844767 hsa-miR-873-5p 0 0 1
chr19:40844652|40844767 hsa-miR-873-3p 0 0 1
chr19:40844652|40844767 hsa-miR-1253 0 0 1
chr19:40844652|40844767 hsa-miR-548g-5p 0 0 1
chr19:40844652|40844767 hsa-miR-548g-3p 0 0 1
chr19:40844652|40844767 hsa-miR-1270 0 0 1
chr19:40844652|40844767 hsa-miR-302e 0 0 1
chr19:40844652|40844767 hsa-miR-512-3p 0 0 1
chr19:40844652|40844767 hsa-miR-615-5p 0 0 1
chr19:40844652|40844767 hsa-miR-338-3p 0 0 1
chr19:40844652|40844767 hsa-miR-324-3p 0 0 1
chr19:40844652|40844767 hsa-miR-520d-3p 0 0 1
chr19:40844652|40844767 hsa-miR-520a-3p 0 0 1
chr19:40844652|40844767 hsa-miR-520c-3p 0 0 1
chr19:40844652|40844767 hsa-miR-762 1 0 0
chr19:40844652|40844767 hsa-miR-4270 1 0 0
chr19:40844652|40844767 hsa-miR-4450 0 1 0
chr19:40844652|40844767 hsa-miR-4507 1 0 0
chr19:40844652|40844767 hsa-miR-4516 0 1 0
chr19:40844652|40844767 hsa-miR-8089 1 1 0
chr19:40844652|40844767 hsa-miR-12120 0 1 0
chr19:40844652|40844767 hsa-miR-7155-5p 0 1 0
chr19:40844652|40844767 hsa-miR-3150a-3p 1 0 0
chr19:40844652|40844767 hsa-miR-6857-5p 0 1 0
chr19:40844652|40844767 hsa-miR-6089 1 0 0
chr19:40844652|40844767 hsa-miR-6871-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6852-5p 0 1 0
chr19:40844652|40844767 hsa-miR-7109-5p 1 0 0
chr19:40844652|40844767 hsa-miR-296-3p 1 0 0
chr19:40844652|40844767 hsa-miR-5010-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6895-3p 0 1 0
chr19:40844652|40844767 hsa-miR-3177-3p 1 0 0
chr19:40844652|40844767 hsa-miR-506-5p 0 1 0
chr19:40844652|40844767 hsa-miR-5001-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6752-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6754-5p 1 1 0
chr19:40844652|40844767 hsa-miR-6756-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6803-5p 1 1 0
chr19:40844652|40844767 hsa-miR-7110-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6751-5p 1 1 0
chr19:40844652|40844767 hsa-miR-6763-5p 1 0 0
chr19:40844652|40844767 hsa-miR-3127-3p 0 1 0
chr19:40844652|40844767 hsa-miR-6846-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6848-5p 1 0 0
chr19:40844652|40844767 hsa-miR-3198 1 1 0
chr19:40844652|40844767 hsa-miR-3940-5p 1 0 0
chr19:40844652|40844767 hsa-miR-6855-5p 0 1 0
chr19:40844652|40844767 hsa-miR-4700-5p 0 1 0
chr19:40844652|40844767 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:40844652|40844767
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD
Nucleotide Sequence ATGCTGGGCTCTGTGCTGAGAGACCCCAGTTTCTTCTCCAACCCCCAGGACTTCAATCCCCAGCACTTCCTGAATGAGAAGGGGCAGTTTAAGAAGAGTGAT

CircID chr19:40844652|40844767
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MPLLIQEVLGIEVLGVGEETGVSQHRAQHRVHF
Nucleotide Sequence CTGCCCCTTCTCATTCAGGAAGTGCTGGGGATTGAAGTCCTGGGGGTTGGAGAAGAAACTGGGGTCTCTCAGCACAGAGCCCAGCATAGGGTACACTTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites