CircRNA Information

General Information
circRNA Basic Information
CircID chr19:41302721|41302844
Strand +
CircType exon
Host Gene ENSG00000105323.15;
Algorism CIRI2;
Sequence CACCCCCGCGGCCCCGGAAGCCACCACCACCTCGGTTGTCAAAGCGCTTTTCAGGGGGTGGCCCAGCCTTGCGGCCTTCCTCGTTGTACTGCCTCACTAGCTTGTCCGCTTCCTCCCGCTGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:41302721|41302844 hsa-miR-518f-5p 0 0 1
chr19:41302721|41302844 hsa-miR-518f-3p 0 0 1
chr19:41302721|41302844 hsa-miR-518b 0 0 1
chr19:41302721|41302844 hsa-miR-518c-5p 0 0 1
chr19:41302721|41302844 hsa-miR-518c-3p 0 0 1
chr19:41302721|41302844 hsa-miR-518e-5p 0 0 1
chr19:41302721|41302844 hsa-miR-518e-3p 0 0 1
chr19:41302721|41302844 hsa-miR-921 0 1 1
chr19:41302721|41302844 hsa-miR-1827 0 1 1
chr19:41302721|41302844 hsa-miR-1184 0 0 1
chr19:41302721|41302844 hsa-miR-876-3p 0 0 1
chr19:41302721|41302844 hsa-miR-518a-3p 0 1 1
chr19:41302721|41302844 hsa-miR-518d-3p 0 0 1
chr19:41302721|41302844 hsa-miR-323-5p 0 0 1
chr19:41302721|41302844 hsa-miR-514 0 0 1
chr19:41302721|41302844 hsa-miR-549 0 0 1
chr19:41302721|41302844 hsa-miR-608 1 0 0
chr19:41302721|41302844 hsa-miR-658 1 0 0
chr19:41302721|41302844 hsa-miR-940 1 0 0
chr19:41302721|41302844 hsa-miR-1295a 0 1 0
chr19:41302721|41302844 hsa-miR-3138 1 0 0
chr19:41302721|41302844 hsa-miR-3147 1 0 0
chr19:41302721|41302844 hsa-miR-3916 1 0 0
chr19:41302721|41302844 hsa-miR-4430 1 0 0
chr19:41302721|41302844 hsa-miR-4467 1 0 0
chr19:41302721|41302844 hsa-miR-4476 0 1 0
chr19:41302721|41302844 hsa-miR-4519 1 0 0
chr19:41302721|41302844 hsa-miR-4525 1 0 0
chr19:41302721|41302844 hsa-miR-4526 1 0 0
chr19:41302721|41302844 hsa-miR-3960 1 0 0
chr19:41302721|41302844 hsa-miR-4688 1 0 0
chr19:41302721|41302844 hsa-miR-4706 1 0 0
chr19:41302721|41302844 hsa-miR-4739 1 1 0
chr19:41302721|41302844 hsa-miR-5090 1 0 0
chr19:41302721|41302844 hsa-miR-6081 1 0 0
chr19:41302721|41302844 hsa-miR-6090 1 0 0
chr19:41302721|41302844 hsa-miR-6127 1 0 0
chr19:41302721|41302844 hsa-miR-6133 1 0 0
chr19:41302721|41302844 hsa-miR-8072 1 0 0
chr19:41302721|41302844 hsa-miR-8085 1 0 0
chr19:41302721|41302844 hsa-miR-12115 1 0 0
chr19:41302721|41302844 hsa-miR-138-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6765-5p 1 1 0
chr19:41302721|41302844 hsa-miR-671-5p 1 0 0
chr19:41302721|41302844 hsa-miR-7106-5p 1 1 0
chr19:41302721|41302844 hsa-miR-6894-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6799-5p 1 0 0
chr19:41302721|41302844 hsa-miR-766-5p 1 1 0
chr19:41302721|41302844 hsa-miR-6880-5p 1 0 0
chr19:41302721|41302844 hsa-miR-4695-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6746-5p 1 0 0
chr19:41302721|41302844 hsa-miR-7154-3p 1 0 0
chr19:41302721|41302844 hsa-miR-4655-5p 1 0 0
chr19:41302721|41302844 hsa-miR-512-3p 1 0 0
chr19:41302721|41302844 hsa-miR-503-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6748-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6793-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6798-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6782-5p 1 0 0
chr19:41302721|41302844 hsa-miR-345-3p 0 1 0
chr19:41302721|41302844 hsa-miR-6784-5p 0 1 0
chr19:41302721|41302844 hsa-miR-885-3p 1 1 0
chr19:41302721|41302844 hsa-let-7d-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6771-5p 1 0 0
chr19:41302721|41302844 hsa-let-7b-5p 1 0 0
chr19:41302721|41302844 hsa-miR-3648 0 1 0
chr19:41302721|41302844 hsa-miR-4787-5p 1 0 0
chr19:41302721|41302844 hsa-miR-149-3p 1 0 0
chr19:41302721|41302844 hsa-miR-17-5p 0 1 0
chr19:41302721|41302844 hsa-miR-106a-5p 0 1 0
chr19:41302721|41302844 hsa-miR-6878-5p 1 0 0
chr19:41302721|41302844 hsa-miR-4708-3p 0 1 0
chr19:41302721|41302844 hsa-let-7c-5p 1 0 0
chr19:41302721|41302844 hsa-miR-10400-5p 1 0 0
chr19:41302721|41302844 hsa-miR-1207-5p 1 0 0
chr19:41302721|41302844 hsa-miR-1233-5p 1 0 0
chr19:41302721|41302844 hsa-miR-1273h-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6778-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6743-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6756-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6803-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6851-5p 1 0 0
chr19:41302721|41302844 hsa-miR-11181-3p 1 0 0
chr19:41302721|41302844 hsa-miR-1249-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6779-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6780a-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6797-5p 1 0 0
chr19:41302721|41302844 hsa-miR-7111-5p 1 0 0
chr19:41302721|41302844 hsa-miR-4728-5p 1 0 0
chr19:41302721|41302844 hsa-miR-5196-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6780b-5p 1 0 0
chr19:41302721|41302844 hsa-miR-10392-5p 1 0 0
chr19:41302721|41302844 hsa-miR-328-5p 1 0 0
chr19:41302721|41302844 hsa-miR-449c-5p 0 1 0
chr19:41302721|41302844 hsa-miR-4745-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6795-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6858-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6883-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6887-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6885-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6876-5p 0 1 0
chr19:41302721|41302844 hsa-miR-6766-5p 1 0 0
chr19:41302721|41302844 hsa-miR-6785-5p 1 0 0
chr19:41302721|41302844 hsa-miR-373-3p 1 0 0
chr19:41302721|41302844 hsa-miR-372-3p 0 1 0
chr19:41302721|41302844 hsa-miR-130b-3p 0 1 0
chr19:41302721|41302844 hsa-miR-526a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:41302721|41302844
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MSKRFSGGGPALRPSSLYCLTSLSASSRC
Nucleotide Sequence TTGTCAAAGCGCTTTTCAGGGGGTGGCCCAGCCTTGCGGCCTTCCTCGTTGTACTGCCTCACTAGCTTGTCCGCTTCCTCCCGCTGC

CircID chr19:41302721|41302844
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence LQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGG
Nucleotide Sequence CTGCAGCGGGAGGAAGCGGACAAGCTAGTGAGGCAGTACAACGAGGAAGGCCGCAAGGCTGGGCCACCCCCTGAAAAGCGCTTTGACAACCGAGGTGGTGGTGGCTTCCGGGGCCGCGGGGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites