CircNet

General Information

circRNA Basic Information

CircID	chr19:41307273\|41307444
Strand	-
CircType	exon
Host Gene	ENSG00000105323.15;
Algorism	CIRI2;
Sequence	GATGCCCCAGTTCCCCATAACTTTGCACACAAGCTTCTGTGTTCAGTTGAATTGTAACTGCTTTTTGTATTTGGAGAGAGTGACTATTGAACTTGAAACCTTTTATTCCGGGCGTCTTGGTAGTTTCTGGTGGGATTCAGTGGGTGAGAGGGAAGAAGGGGAGGTTGGGGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:41307273\|41307444	hsa-miR-19a-5p	0	0	1
chr19:41307273\|41307444	hsa-miR-19a-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-26b-5p	0	0	1
chr19:41307273\|41307444	hsa-miR-26b-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-498-5p	0	0	1
chr19:41307273\|41307444	hsa-miR-498-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-527	-4	0	1
chr19:41307273\|41307444	hsa-miR-581	-2	0	1
chr19:41307273\|41307444	hsa-miR-668-5p	0	0	1
chr19:41307273\|41307444	hsa-miR-668-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-935	0	0	1
chr19:41307273\|41307444	hsa-miR-1229-5p	0	0	1
chr19:41307273\|41307444	hsa-miR-1229-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-1297	0	0	1
chr19:41307273\|41307444	hsa-miR-1248	-6	0	1
chr19:41307273\|41307444	hsa-miR-486-3p	0	0	1
chr19:41307273\|41307444	hsa-miR-1224-3p	-17	0	1
chr19:41307273\|41307444	hsa-miR-518a-5p	-4	0	1
chr19:41307273\|41307444	hsa-miR-515-5p	-12	1	1
chr19:41307273\|41307444	hsa-miR-1260	0	0	1
chr19:41307273\|41307444	hsa-miR-1280	0	0	1
chr19:41307273\|41307444	hsa-miR-642	0	0	1
chr19:41307273\|41307444	hsa-miR-26a	0	0	1
chr19:41307273\|41307444	hsa-miR-19b	0	0	1
chr19:41307273\|41307444	hsa-miR-147	0	0	1
chr19:41307273\|41307444	hsa-miR-1260b	-12	1	0
chr19:41307273\|41307444	hsa-miR-3188	-18	1	0
chr19:41307273\|41307444	hsa-miR-6892-3p	-12	1	0
chr19:41307273\|41307444	hsa-miR-6881-3p	-15	1	0
chr19:41307273\|41307444	hsa-miR-6832-3p	-16	1	0
chr19:41307273\|41307444	hsa-miR-877-3p	-19	1	0
chr19:41307273\|41307444	hsa-miR-4738-3p	-11	1	0
chr19:41307273\|41307444	hsa-miR-4724-5p	-9	1	0
chr19:41307273\|41307444	hsa-miR-4778-3p	-6	1	0
chr19:41307273\|41307444	hsa-miR-6793-3p	-21	1	0
chr19:41307273\|41307444	hsa-miR-5088-3p	-17	1	0
chr19:41307273\|41307444	hsa-miR-3124-3p	-11	1	0
chr19:41307273\|41307444	hsa-miR-6734-3p	-16	1	0
chr19:41307273\|41307444	hsa-miR-642a-5p	-9	1	0
chr19:41307273\|41307444	hsa-miR-6756-3p	-19	1	0
chr19:41307273\|41307444	hsa-miR-9902	-5	1	0
chr19:41307273\|41307444	hsa-miR-519e-5p	-11	1	0
chr19:41307273\|41307444	hsa-miR-208b-3p	-2	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:41307273\|41307444
ORF Type	ORF1
Protein Length	57
Nucleotide Length	171
Protein Sequence	MPQFPITLHTSFCVQLNCNCFLYLERVTIELETFYSGRLGSFWWDSVGEREEGEVGG
Nucleotide Sequence	ATGCCCCAGTTCCCCATAACTTTGCACACAAGCTTCTGTGTTCAGTTGAATTGTAACTGCTTTTTGTATTTGGAGAGAGTGACTATTGAACTTGAAACCTTTTATTCCGGGCGTCTTGGTAGTTTCTGGTGGGATTCAGTGGGTGAGAGGGAAGAAGGGGAGGTTGGGGGG

CircID	chr19:41307273\|41307444
ORF Type	ORF2
Protein Length	28
Nucleotide Length	84
Protein Sequence	MNLKPFIPGVLVVSGGIQWVRGKKGRLG
Nucleotide Sequence	TTGAACTTGAAACCTTTTATTCCGGGCGTCTTGGTAGTTTCTGGTGGGATTCAGTGGGTGAGAGGGAAGAAGGGGAGGTTGGGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information