CircRNA Information

General Information
circRNA Basic Information
CircID chr19:41426725|41426851
Strand +
CircType exon
Host Gene ENSG00000177191.2;
Algorism CIRI2;
Sequence ACCCCAATGGCCTCCGTGGCTCCCCTGTGGCTCCCTTGTAGCTCCCGCGGCCGCCCCTTCCCTGGGCCGGGTCATGCGCTGCCCCAAGTGCCTTCTCTGCCTGTCAGCACTGCTCACACTCCTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:41426725|41426851 hsa-miR-122-5p 0 0 1
chr19:41426725|41426851 hsa-miR-122-3p 0 0 1
chr19:41426725|41426851 hsa-miR-506-5p 0 0 1
chr19:41426725|41426851 hsa-miR-506-3p 0 0 1
chr19:41426725|41426851 hsa-miR-624-5p 0 0 1
chr19:41426725|41426851 hsa-miR-624-3p 0 0 1
chr19:41426725|41426851 hsa-miR-665 0 1 1
chr19:41426725|41426851 hsa-miR-920 1 1 1
chr19:41426725|41426851 hsa-miR-939-5p 0 0 1
chr19:41426725|41426851 hsa-miR-939-3p 0 0 1
chr19:41426725|41426851 hsa-miR-512-3p 0 1 1
chr19:41426725|41426851 hsa-miR-486-3p 0 1 1
chr19:41426725|41426851 hsa-miR-885-3p 0 0 1
chr19:41426725|41426851 hsa-miR-941 0 0 1
chr19:41426725|41426851 hsa-miR-574-5p 0 1 1
chr19:41426725|41426851 hsa-miR-628-5p 0 0 1
chr19:41426725|41426851 hsa-miR-220c 0 0 1
chr19:41426725|41426851 hsa-miR-124 0 0 1
chr19:41426725|41426851 hsa-miR-608 1 0 0
chr19:41426725|41426851 hsa-miR-663a 1 0 0
chr19:41426725|41426851 hsa-miR-2278 1 0 0
chr19:41426725|41426851 hsa-miR-3138 1 0 0
chr19:41426725|41426851 hsa-miR-3154 1 0 0
chr19:41426725|41426851 hsa-miR-3196 1 1 0
chr19:41426725|41426851 hsa-miR-4281 1 0 0
chr19:41426725|41426851 hsa-miR-3660 0 1 0
chr19:41426725|41426851 hsa-miR-3937 1 0 0
chr19:41426725|41426851 hsa-miR-4449 1 0 0
chr19:41426725|41426851 hsa-miR-4467 1 0 0
chr19:41426725|41426851 hsa-miR-4479 1 0 0
chr19:41426725|41426851 hsa-miR-4498 1 0 0
chr19:41426725|41426851 hsa-miR-4519 0 1 0
chr19:41426725|41426851 hsa-miR-4526 1 1 0
chr19:41426725|41426851 hsa-miR-3960 1 0 0
chr19:41426725|41426851 hsa-miR-4651 1 0 0
chr19:41426725|41426851 hsa-miR-4654 1 0 0
chr19:41426725|41426851 hsa-miR-4656 1 0 0
chr19:41426725|41426851 hsa-miR-4673 1 0 0
chr19:41426725|41426851 hsa-miR-4675 1 0 0
chr19:41426725|41426851 hsa-miR-4688 1 1 0
chr19:41426725|41426851 hsa-miR-4692 0 1 0
chr19:41426725|41426851 hsa-miR-4739 1 0 0
chr19:41426725|41426851 hsa-miR-4741 1 0 0
chr19:41426725|41426851 hsa-miR-4767 1 0 0
chr19:41426725|41426851 hsa-miR-5090 1 0 0
chr19:41426725|41426851 hsa-miR-6075 0 1 0
chr19:41426725|41426851 hsa-miR-6081 1 1 0
chr19:41426725|41426851 hsa-miR-6085 1 0 0
chr19:41426725|41426851 hsa-miR-6090 1 0 0
chr19:41426725|41426851 hsa-miR-6860 1 0 0
chr19:41426725|41426851 hsa-miR-7150 1 0 0
chr19:41426725|41426851 hsa-miR-9500 0 1 0
chr19:41426725|41426851 hsa-miR-9901 1 0 0
chr19:41426725|41426851 hsa-miR-12115 1 0 0
chr19:41426725|41426851 hsa-miR-12126 0 1 0
chr19:41426725|41426851 hsa-miR-4433b-3p 1 1 0
chr19:41426725|41426851 hsa-miR-6840-3p 0 1 0
chr19:41426725|41426851 hsa-miR-4665-3p 1 0 0
chr19:41426725|41426851 hsa-miR-6747-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4433a-3p 1 1 0
chr19:41426725|41426851 hsa-miR-6825-5p 1 0 0
chr19:41426725|41426851 hsa-miR-187-5p 1 0 0
chr19:41426725|41426851 hsa-miR-139-3p 1 0 0
chr19:41426725|41426851 hsa-miR-1236-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6757-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4695-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6746-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4653-3p 1 0 0
chr19:41426725|41426851 hsa-miR-505-5p 0 1 0
chr19:41426725|41426851 hsa-miR-6741-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6727-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6721-5p 1 0 0
chr19:41426725|41426851 hsa-miR-874-3p 1 0 0
chr19:41426725|41426851 hsa-miR-3180-3p 1 1 0
chr19:41426725|41426851 hsa-miR-6805-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6827-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6798-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6770-5p 1 1 0
chr19:41426725|41426851 hsa-miR-2467-3p 1 0 0
chr19:41426725|41426851 hsa-miR-6782-5p 1 0 0
chr19:41426725|41426851 hsa-miR-5008-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1226-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4640-5p 1 0 0
chr19:41426725|41426851 hsa-miR-3648 1 1 0
chr19:41426725|41426851 hsa-miR-4787-5p 1 0 0
chr19:41426725|41426851 hsa-miR-149-3p 1 0 0
chr19:41426725|41426851 hsa-miR-3616-3p 1 0 0
chr19:41426725|41426851 hsa-miR-6824-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6789-5p 1 1 0
chr19:41426725|41426851 hsa-miR-7112-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6869-5p 1 0 0
chr19:41426725|41426851 hsa-miR-423-5p 1 0 0
chr19:41426725|41426851 hsa-miR-7846-3p 1 0 0
chr19:41426725|41426851 hsa-miR-605-3p 0 1 0
chr19:41426725|41426851 hsa-miR-222-3p 1 0 0
chr19:41426725|41426851 hsa-miR-140-3p 1 0 0
chr19:41426725|41426851 hsa-miR-124-3p 0 1 0
chr19:41426725|41426851 hsa-miR-10400-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1207-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1233-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1273h-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4763-3p 1 0 0
chr19:41426725|41426851 hsa-miR-6778-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6787-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6816-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6870-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6775-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1343-5p 1 0 0
chr19:41426725|41426851 hsa-miR-3180 1 0 0
chr19:41426725|41426851 hsa-miR-6726-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6737-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6743-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6754-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6756-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6819-5p 1 0 0
chr19:41426725|41426851 hsa-miR-10401-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6722-3p 1 0 0
chr19:41426725|41426851 hsa-miR-6808-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6879-5p 1 0 0
chr19:41426725|41426851 hsa-miR-7111-5p 1 0 0
chr19:41426725|41426851 hsa-miR-1915-3p 0 1 0
chr19:41426725|41426851 hsa-miR-4728-5p 1 0 0
chr19:41426725|41426851 hsa-miR-5196-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6780b-5p 1 0 0
chr19:41426725|41426851 hsa-miR-10526-3p 1 0 0
chr19:41426725|41426851 hsa-miR-328-5p 1 0 0
chr19:41426725|41426851 hsa-miR-449c-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4632-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4685-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4726-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6735-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6777-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6794-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6795-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6846-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6848-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6858-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6883-5p 1 0 0
chr19:41426725|41426851 hsa-miR-3187-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4723-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6511a-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6511b-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6750-5p 1 0 0
chr19:41426725|41426851 hsa-miR-4667-5p 1 0 0
chr19:41426725|41426851 hsa-miR-5591-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6791-5p 1 0 0
chr19:41426725|41426851 hsa-miR-6762-5p 1 1 0
chr19:41426725|41426851 hsa-miR-6764-5p 0 1 0
chr19:41426725|41426851 hsa-miR-6797-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:41426725|41426851
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MASVAPLWLPCSSRGRPFPGPGHALPQVPSLPVSTAHTPG
Nucleotide Sequence ATGGCCTCCGTGGCTCCCCTGTGGCTCCCTTGTAGCTCCCGCGGCCGCCCCTTCCCTGGGCCGGGTCATGCGCTGCCCCAAGTGCCTTCTCTGCCTGTCAGCACTGCTCACACTCCTGGG
CircID chr19:41426725|41426851
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MGQRMTRPREGAAAGATREPQGSHGGHWG
Nucleotide Sequence TTGGGGCAGCGCATGACCCGGCCCAGGGAAGGGGCGGCCGCGGGAGCTACAAGGGAGCCACAGGGGAGCCACGGAGGCCATTGGGGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab