CircRNA Information

General Information
circRNA Basic Information
CircID chr19:41715650|41717733
Strand +
CircType exon
Host Gene ENSG00000105388.13;
Algorism CIRI2;
Sequence AGAGGACATTCAGGATGACTGGGTCGCTGTGGTCAACACTTAATTCGTTCTGGATTCCACACTCATAGGGTCCTACATCATTCCTTGTGACACTGAGTAGAGTGAGGGTCCTGTTGTCATTGGACAGCTGCAGCCTGGGACTGACCGGGAGGCTCTGATTATTTACCCACCACAGGTAGGTTGTGTTCTGAATCTCAGGTTCACAGGTTAAGGCTACAGCATCCTCATCCTCCACGGGGTTGGAGTTGTTGCTGGTGATGAAGGGTTTGGGTGGCTCTGCATAGACTGTGATCGTCGTGACTGTGGTCCTATTGAGGCCAGTGTCTGAGTTATGGGCTTGGCACGTATAGGATCCACTATTATTCACAGTGATGTTGGGGATAAAGAGCTCTTGGGTGGATTGCTGGAAAGTCCCATTGACAAACCAAGAGTACTGTGCAGGTGGGTTAGAGGCTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGATCTGTAAGATGTGTTTAGAGGGGAAATGGTGGGGGCATCCGGGCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:41715650|41717733 hsa-miR-27a-5p 0 0 1
chr19:41715650|41717733 hsa-miR-27a-3p 0 0 1
chr19:41715650|41717733 hsa-miR-205-5p 0 0 1
chr19:41715650|41717733 hsa-miR-205-3p 0 0 1
chr19:41715650|41717733 hsa-miR-27b-5p 0 0 1
chr19:41715650|41717733 hsa-miR-27b-3p 0 0 1
chr19:41715650|41717733 hsa-miR-335-5p 0 0 1
chr19:41715650|41717733 hsa-miR-335-3p 0 0 1
chr19:41715650|41717733 hsa-miR-193b-5p 0 0 1
chr19:41715650|41717733 hsa-miR-193b-3p 0 0 1
chr19:41715650|41717733 hsa-miR-510-5p 0 0 1
chr19:41715650|41717733 hsa-miR-510-3p 0 0 1
chr19:41715650|41717733 hsa-miR-551a 0 0 1
chr19:41715650|41717733 hsa-miR-555 0 0 1
chr19:41715650|41717733 hsa-miR-551b-5p 0 0 1
chr19:41715650|41717733 hsa-miR-551b-3p 0 0 1
chr19:41715650|41717733 hsa-miR-595 0 0 1
chr19:41715650|41717733 hsa-miR-597-5p 0 0 1
chr19:41715650|41717733 hsa-miR-597-3p 0 0 1
chr19:41715650|41717733 hsa-miR-600 0 0 1
chr19:41715650|41717733 hsa-miR-633 0 0 1
chr19:41715650|41717733 hsa-miR-634 0 1 1
chr19:41715650|41717733 hsa-miR-649 0 0 1
chr19:41715650|41717733 hsa-miR-1301-5p 0 0 1
chr19:41715650|41717733 hsa-miR-1301-3p 0 0 1
chr19:41715650|41717733 hsa-miR-765 0 0 1
chr19:41715650|41717733 hsa-miR-541-5p 0 0 1
chr19:41715650|41717733 hsa-miR-541-3p 0 0 1
chr19:41715650|41717733 hsa-miR-1226-5p 0 0 1
chr19:41715650|41717733 hsa-miR-1226-3p 0 0 1
chr19:41715650|41717733 hsa-miR-1208 0 0 1
chr19:41715650|41717733 hsa-miR-1255a 0 0 1
chr19:41715650|41717733 hsa-miR-1257 0 0 1
chr19:41715650|41717733 hsa-miR-513b-5p 0 0 1
chr19:41715650|41717733 hsa-miR-513b-3p 0 0 1
chr19:41715650|41717733 hsa-miR-1324 0 0 1
chr19:41715650|41717733 hsa-miR-512-5p 0 0 1
chr19:41715650|41717733 hsa-miR-1184 0 1 1
chr19:41715650|41717733 hsa-miR-574-5p 0 0 1
chr19:41715650|41717733 hsa-miR-490-3p 0 0 1
chr19:41715650|41717733 hsa-miR-654-5p 0 0 1
chr19:41715650|41717733 hsa-miR-1224-3p 0 1 1
chr19:41715650|41717733 hsa-miR-140-3p 0 1 1
chr19:41715650|41717733 hsa-miR-338-3p 0 0 1
chr19:41715650|41717733 hsa-miR-337-3p 0 1 1
chr19:41715650|41717733 hsa-miR-455-3p 0 0 1
chr19:41715650|41717733 hsa-miR-193a-3p 0 1 1
chr19:41715650|41717733 hsa-miR-128 0 0 1
chr19:41715650|41717733 hsa-miR-1255b 0 0 1
chr19:41715650|41717733 hsa-miR-549 0 0 1
chr19:41715650|41717733 hsa-miR-1185 0 0 1
chr19:41715650|41717733 hsa-miR-499-3p 0 0 1
chr19:41715650|41717733 hsa-miR-101 0 0 1
chr19:41715650|41717733 hsa-miR-612 1 0 0
chr19:41715650|41717733 hsa-miR-940 1 0 0
chr19:41715650|41717733 hsa-miR-1538 1 1 0
chr19:41715650|41717733 hsa-miR-3131 1 0 0
chr19:41715650|41717733 hsa-miR-3137 0 1 0
chr19:41715650|41717733 hsa-miR-3176 0 1 0
chr19:41715650|41717733 hsa-miR-3911 0 1 0
chr19:41715650|41717733 hsa-miR-4457 0 1 0
chr19:41715650|41717733 hsa-miR-4525 0 1 0
chr19:41715650|41717733 hsa-miR-4658 1 1 0
chr19:41715650|41717733 hsa-miR-5047 0 1 0
chr19:41715650|41717733 hsa-miR-6844 0 1 0
chr19:41715650|41717733 hsa-miR-12132 0 1 0
chr19:41715650|41717733 hsa-miR-128-3p 0 1 0
chr19:41715650|41717733 hsa-miR-4700-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6747-5p 1 0 0
chr19:41715650|41717733 hsa-miR-6894-5p 1 1 0
chr19:41715650|41717733 hsa-miR-766-3p 1 0 0
chr19:41715650|41717733 hsa-miR-6833-5p 0 1 0
chr19:41715650|41717733 hsa-miR-7847-3p 0 1 0
chr19:41715650|41717733 hsa-miR-200b-5p 0 1 0
chr19:41715650|41717733 hsa-miR-6845-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6783-5p 0 1 0
chr19:41715650|41717733 hsa-miR-6735-3p 1 0 0
chr19:41715650|41717733 hsa-miR-6882-3p 1 0 0
chr19:41715650|41717733 hsa-miR-6757-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6821-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6861-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6830-5p 0 1 0
chr19:41715650|41717733 hsa-miR-194-3p 1 0 0
chr19:41715650|41717733 hsa-miR-3678-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6826-5p 0 1 0
chr19:41715650|41717733 hsa-miR-3180-5p 1 0 0
chr19:41715650|41717733 hsa-miR-1288-5p 0 1 0
chr19:41715650|41717733 hsa-miR-6778-3p 0 1 0
chr19:41715650|41717733 hsa-miR-2276-5p 1 1 0
chr19:41715650|41717733 hsa-miR-6869-3p 1 0 0
chr19:41715650|41717733 hsa-miR-7848-3p 0 1 0
chr19:41715650|41717733 hsa-miR-4717-5p 1 0 0
chr19:41715650|41717733 hsa-miR-6800-3p 0 1 0
chr19:41715650|41717733 hsa-miR-4714-3p 1 0 0
chr19:41715650|41717733 hsa-miR-6790-3p 1 0 0
chr19:41715650|41717733 hsa-miR-589-3p 0 1 0
chr19:41715650|41717733 hsa-let-7b-3p 1 0 0
chr19:41715650|41717733 hsa-miR-6769a-5p 1 1 0
chr19:41715650|41717733 hsa-miR-4745-5p 1 0 0
chr19:41715650|41717733 hsa-miR-675-5p 1 0 0
chr19:41715650|41717733 hsa-miR-4758-5p 1 0 0
chr19:41715650|41717733 hsa-miR-365b-5p 0 1 0
chr19:41715650|41717733 hsa-miR-1199-5p 1 0 0
chr19:41715650|41717733 hsa-miR-6877-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6790-5p 1 1 0
chr19:41715650|41717733 hsa-miR-4722-3p 1 1 0
chr19:41715650|41717733 hsa-miR-6727-3p 0 1 0
chr19:41715650|41717733 hsa-miR-3130-5p 0 1 0
chr19:41715650|41717733 hsa-miR-6819-3p 0 1 0
chr19:41715650|41717733 hsa-miR-6823-3p 0 1 0
chr19:41715650|41717733 hsa-miR-4701-5p 1 0 0
chr19:41715650|41717733 hsa-miR-200a-5p 0 1 0
chr19:41715650|41717733 hsa-miR-3922-3p 0 1 0
chr19:41715650|41717733 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:41715650|41717733
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MCSESQVHRLRLQHPHPPRGWSCCW
Nucleotide Sequence TTGTGTTCTGAATCTCAGGTTCACAGGTTAAGGCTACAGCATCCTCATCCTCCACGGGGTTGGAGTTGTTGCTGGTGA

CircID chr19:41715650|41717733
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MRGRRGSDFPLICKMCLEGKWWGHPGH
Nucleotide Sequence CTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGATCTGTAAGATGTGTTTAGAGGGGAAATGGTGGGGGCATCCGGGCCAT

CircID chr19:41715650|41717733
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MQPGTDREALIIYPPQVGCVLNLRFTG
Nucleotide Sequence CTGCAGCCTGGGACTGACCGGGAGGCTCTGATTATTTACCCACCACAGGTAGGTTGTGTTCTGAATCTCAGGTTCACAGGTTAA

CircID chr19:41715650|41717733
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence MGLARIGSTIIHSDVGDKELLGGLLESPIDKPRVLCRWVRGCVAGEVQIFP
Nucleotide Sequence ATGGGCTTGGCACGTATAGGATCCACTATTATTCACAGTGATGTTGGGGATAAAGAGCTCTTGGGTGGATTGCTGGAAAGTCCCATTGACAAACCAAGAGTACTGTGCAGGTGGGTTAGAGGCTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGA

CircID chr19:41715650|41717733
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MLGIKSSWVDCWKVPLTNQEYCAGGLEAAWQERFRFSPDL
Nucleotide Sequence ATGTTGGGGATAAAGAGCTCTTGGGTGGATTGCTGGAAAGTCCCATTGACAAACCAAGAGTACTGTGCAGGTGGGTTAGAGGCTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGATCTGTAA

CircID chr19:41715650|41717733
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MHSTLGLSMGLSSNPPKSSLSPTSL
Nucleotide Sequence CTGCACAGTACTCTTGGTTTGTCAATGGGACTTTCCAGCAATCCACCCAAGAGCTCTTTATCCCCAACATCACTGTGA

CircID chr19:41715650|41717733
ORF Type ORF7
Protein Length 35
Nucleotide Length 108
Protein Sequence MASIGPQSRRSQSMQSHPNPSSPATTPTPWRMRML
Nucleotide Sequence CTGGCCTCAATAGGACCACAGTCACGACGATCACAGTCTATGCAGAGCCACCCAAACCCTTCATCACCAGCAACAACTCCAACCCCGTGGAGGATGAGGATGCTGTAG

CircID chr19:41715650|41717733
ORF Type ORF8
Protein Length 158
Nucleotide Length 474
Protein Sequence MNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVL
Nucleotide Sequence CTGAACCTCTCCTGCCACGCAGCCTCTAACCCACCTGCACAGTACTCTTGGTTTGTCAATGGGACTTTCCAGCAATCCACCCAAGAGCTCTTTATCCCCAACATCACTGTGAATAATAGTGGATCCTATACGTGCCAAGCCCATAACTCAGACACTGGCCTCAATAGGACCACAGTCACGACGATCACAGTCTATGCAGAGCCACCCAAACCCTTCATCACCAGCAACAACTCCAACCCCGTGGAGGATGAGGATGCTGTAGCCTTAACCTGTGAACCTGAGATTCAGAACACAACCTACCTGTGGTGGGTAAATAATCAGAGCCTCCCGGTCAGTCCCAGGCTGCAGCTGTCCAATGACAACAGGACCCTCACTCTACTCAGTGTCACAAGGAATGATGTAGGACCCTATGAGTGTGGAATCCAGAACGAATTAAGTGTTGACCACAGCGACCCAGTCATCCTGAATGTCCTC

CircID chr19:41715650|41717733
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MLGIKSSWVDCWKVPLTNQEYCAGGLEAAWQERFRFSPDL
Nucleotide Sequence ATGTTGGGGATAAAGAGCTCTTGGGTGGATTGCTGGAAAGTCCCATTGACAAACCAAGAGTACTGTGCAGGTGGGTTAGAGGCTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGATCTGTAA

CircID chr19:41715650|41717733
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MRGRRGSDFPLICKMCLEGKWWGHPGH
Nucleotide Sequence CTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGATCTGTAAGATGTGTTTAGAGGGGAAATGGTGGGGGCATCCGGGCCAT

CircID chr19:41715650|41717733
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MELLLVMKGLGGSDCDRRDCGPIEASV
Nucleotide Sequence TTGGAGTTGTTGCTGGTGATGAAGGGTTTGGGTGGCTCTGACTGTGATCGTCGTGACTGTGGTCCTATTGAGGCCAGTGTCTGA

CircID chr19:41715650|41717733
ORF Type ORF6
Protein Length 51
Nucleotide Length 156
Protein Sequence MGLARIGSTIIHSDVGDKELLGGLLESPIDKPRVLCRWVRGCVAGEVQIFP
Nucleotide Sequence ATGGGCTTGGCACGTATAGGATCCACTATTATTCACAGTGATGTTGGGGATAAAGAGCTCTTGGGTGGATTGCTGGAAAGTCCCATTGACAAACCAAGAGTACTGTGCAGGTGGGTTAGAGGCTGCGTGGCAGGAGAGGTTCAGATTTTCCCCTGA

CircID chr19:41715650|41717733
ORF Type ORF7
Protein Length 25
Nucleotide Length 78
Protein Sequence MHSTLGLSMGLSSNPPKSSLSPTSL
Nucleotide Sequence CTGCACAGTACTCTTGGTTTGTCAATGGGACTTTCCAGCAATCCACCCAAGAGCTCTTTATCCCCAACATCACTGTGA

CircID chr19:41715650|41717733
ORF Type ORF8
Protein Length 105
Nucleotide Length 315
Protein Sequence MASIGPQSRRSQSEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVL
Nucleotide Sequence CTGGCCTCAATAGGACCACAGTCACGACGATCACAGTCAGAGCCACCCAAACCCTTCATCACCAGCAACAACTCCAACCCCGTGGAGGATGAGGATGCTGTAGCCTTAACCTGTGAACCTGAGATTCAGAACACAACCTACCTGTGGTGGGTAAATAATCAGAGCCTCCCGGTCAGTCCCAGGCTGCAGCTGTCCAATGACAACAGGACCCTCACTCTACTCAGTGTCACAAGGAATGATGTAGGACCCTATGAGTGTGGAATCCAGAACGAATTAAGTGTTGACCACAGCGACCCAGTCATCCTGAATGTCCTC

CircID chr19:41715650|41717733
ORF Type ORF9
Protein Length 81
Nucleotide Length 246
Protein Sequence MNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVRATQTLHHQQQLQPRGG
Nucleotide Sequence CTGAACCTCTCCTGCCACGCAGCCTCTAACCCACCTGCACAGTACTCTTGGTTTGTCAATGGGACTTTCCAGCAATCCACCCAAGAGCTCTTTATCCCCAACATCACTGTGAATAATAGTGGATCCTATACGTGCCAAGCCCATAACTCAGACACTGGCCTCAATAGGACCACAGTCACGACGATCACAGTCAGAGCCACCCAAACCCTTCATCACCAGCAACAACTCCAACCCCGTGGAGGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites