CircNet

General Information

circRNA Basic Information

CircID	chr19:41770967\|41771219
Strand	+
CircType	exon
Host Gene	ENSG00000086548.8;
Algorism	CIRI2;
Sequence	GTTGGGATTGACAAGATAGATCTGACACTCTGTTAAGTTACCCTCTGAAGCTACTTCTTGTGAAATACTAATGACAGCATCATCCTGCCAAGCGAAAGAGGCAGGCATAAGCAAGGACAAATTAAAAGGGGGTAAGAGCCTTATCATGATGAGGAGTCTTGTTTTGACATCTTGGGAAAAGCTGTCCATAGTGTGAAGTCGTCAATTTCTCACCATGGTTTGCAGTTTGACTGTCTCTAGTTAGGTGAAGTCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:41770967\|41771219	hsa-miR-377-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-377-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-433-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-433-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-412-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-412-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-539-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-539-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-562	0	0	1
chr19:41770967\|41771219	hsa-miR-616-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-616-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-626	0	0	1
chr19:41770967\|41771219	hsa-miR-1323	0	0	1
chr19:41770967\|41771219	hsa-miR-548o-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-513b-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-513b-3p	0	0	1
chr19:41770967\|41771219	hsa-miR-1322	0	1	1
chr19:41770967\|41771219	hsa-miR-548o	0	0	1
chr19:41770967\|41771219	hsa-miR-532-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-502-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-1207-5p	0	0	1
chr19:41770967\|41771219	hsa-miR-759	0	1	0
chr19:41770967\|41771219	hsa-miR-1183	0	1	0
chr19:41770967\|41771219	hsa-miR-1913	1	0	0
chr19:41770967\|41771219	hsa-miR-6822-3p	1	0	0
chr19:41770967\|41771219	hsa-miR-4633-5p	0	1	0
chr19:41770967\|41771219	hsa-miR-6894-3p	0	1	0
chr19:41770967\|41771219	hsa-miR-6847-5p	1	0	0
chr19:41770967\|41771219	hsa-miR-2355-3p	0	1	0
chr19:41770967\|41771219	hsa-miR-4524a-3p	0	1	0
chr19:41770967\|41771219	hsa-miR-3127-3p	1	0	0
chr19:41770967\|41771219	hsa-miR-4685-3p	1	0	0
chr19:41770967\|41771219	hsa-miR-6781-3p	0	1	0
chr19:41770967\|41771219	hsa-miR-5579-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:41770967\|41771219
ORF Type	ORF1
Protein Length	41
Nucleotide Length	126
Protein Sequence	MTASSCQAKEAGISKDKLKGGKSLIMMRSLVLTSWEKLSIV
Nucleotide Sequence	ATGACAGCATCATCCTGCCAAGCGAAAGAGGCAGGCATAAGCAAGGACAAATTAAAAGGGGGTAAGAGCCTTATCATGATGAGGAGTCTTGTTTTGACATCTTGGGAAAAGCTGTCCATAGTGTGA

CircID	chr19:41770967\|41771219
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MTTSHYGQLFPRCQNKTPHHDKALTPF
Nucleotide Sequence	TTGACGACTTCACACTATGGACAGCTTTTCCCAAGATGTCAAAACAAGACTCCTCATCATGATAAGGCTCTTACCCCCTTTTAA

CircID	chr19:41770967\|41771219
ORF Type	ORF3
Protein Length	63
Nucleotide Length	189
Protein Sequence	MDSFSQDVKTRLLIMIRLLPPFNLSLLMPASFAWQDDAVISISQEVASEGNLTECQIYLVNPN
Nucleotide Sequence	ATGGACAGCTTTTCCCAAGATGTCAAAACAAGACTCCTCATCATGATAAGGCTCTTACCCCCTTTTAATTTGTCCTTGCTTATGCCTGCCTCTTTCGCTTGGCAGGATGATGCTGTCATTAGTATTTCACAAGAAGTAGCTTCAGAGGGTAACTTAACAGAGTGTCAGATCTATCTTGTCAATCCCAAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information