CircNet

General Information

circRNA Basic Information

CircID	chr19:42198649\|42198827
Strand	+
CircType	exon
Host Gene	ENSG00000160570.12;
Algorism	CIRI2;
Sequence	CTTCCCCCCTGCTGTCCAGAGCTGAACATAGACTTGCACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAAACAGCCACCTTCTTGGAAAGGGAATGCAAAGGCTTTGGGGGTGATGGAAAAGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:42198649\|42198827	hsa-miR-19a-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-19a-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-33a-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-33a-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-204-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-204-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-211-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-211-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-214-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-214-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-130a-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-130a-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-141-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-141-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-200a-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-200a-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-301a-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-301a-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-130b-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-130b-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-328-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-328-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-422a	0	0	1
chr19:42198649\|42198827	hsa-miR-489-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-489-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-587	0	0	1
chr19:42198649\|42198827	hsa-miR-623	1	0	1
chr19:42198649\|42198827	hsa-miR-625-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-625-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-33b-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-33b-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-454-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-454-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-301b-5p	0	0	1
chr19:42198649\|42198827	hsa-miR-301b-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-1272	0	0	1
chr19:42198649\|42198827	hsa-miR-1322	0	1	1
chr19:42198649\|42198827	hsa-miR-125a-3p	0	1	1
chr19:42198649\|42198827	hsa-miR-508-5p	0	1	1
chr19:42198649\|42198827	hsa-miR-519b-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-519c-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-542-3p	0	0	1
chr19:42198649\|42198827	hsa-miR-378	0	0	1
chr19:42198649\|42198827	hsa-miR-19b	0	0	1
chr19:42198649\|42198827	hsa-miR-519a	0	0	1
chr19:42198649\|42198827	hsa-miR-761	0	1	0
chr19:42198649\|42198827	hsa-miR-543	0	1	0
chr19:42198649\|42198827	hsa-miR-760	1	0	0
chr19:42198649\|42198827	hsa-miR-4501	0	1	0
chr19:42198649\|42198827	hsa-miR-6510-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-874-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-3189-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-642b-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-6800-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-518c-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-4755-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-6817-5p	0	1	0
chr19:42198649\|42198827	hsa-miR-5006-3p	0	1	0
chr19:42198649\|42198827	hsa-miR-4769-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:42198649\|42198827
ORF Type	ORF1
Protein Length	52
Nucleotide Length	156
Protein Sequence	MNIDLHLDVTWSVTWECYGSIIPRPTVAHGAKTSKQPPSWKGNAKALGVMEK
Nucleotide Sequence	CTGAACATAGACTTGCACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAAACAGCCACCTTCTTGGAAAGGGAATGCAAAGGCTTTGGGGGTGATGGAAAAG

CircID	chr19:42198649\|42198827
ORF Type	ORF2
Protein Length	41
Nucleotide Length	126
Protein Sequence	MSPGVSHGSVMAASYQGLLLHMGPKPVNSHLLGKGMQRLWG
Nucleotide Sequence	ATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAAACAGCCACCTTCTTGGAAAGGGAATGCAAAGGCTTTGGGGGTGA

CircID	chr19:42198649\|42198827
ORF Type	ORF3
Protein Length	38
Nucleotide Length	117
Protein Sequence	MLSRAEHRLALGCHLECHMGVLWQHHTKAYCCTWGQNQ
Nucleotide Sequence	CTGCTGTCCAGAGCTGAACATAGACTTGCACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAA

CircID	chr19:42198649\|42198827
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MFTGFGPMCNSRPWYDAAITLPCDTPGDIQVQVYVQLWTAGGK
Nucleotide Sequence	CTGTTTACTGGTTTTGGCCCCATGTGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCAAGTCTATGTTCAGCTCTGGACAGCAGGGGGGAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information