CircRNA Information

General Information
circRNA Basic Information
CircID chr19:43626857|43627235
Strand +
CircType exon
Host Gene ENSG00000105767.2;
Algorism CIRI2;
Sequence GAGGGGGGCTATTTCTGCCAGCTCTACACAGAAGACACCCACCACCAGATTGCCACGCTCACGGTACTAGGTAACGCCCTCCCCCTTGTCAGACGCATCCTCTCCTCCTTTCTTCTCTGCTTCTCTCTTCTCCTGAGACTTTCAGACCATGGCTATTTTTAACATCCTGGATGGGCATCTGGCTCCTGACCTCTCCCCTTTGACCCCTGCCACCTGGGACCCTGGTTCCCTATGGTCGCTGGGAACAGGCAGCTCGATCGCTTTGAGCCCACGTTCGTGCCTTCTTTAACCCCTTACTTCCCTTCTCCCTGCGGCAGTGGCCCCAGAGAATCCTGTGGTGGAGGTCCGGGAGCAGGCGGTAGAGGGCGGCGAGGTGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:43626857|43627235 hsa-miR-22-5p 0 0 1
chr19:43626857|43627235 hsa-miR-22-3p 0 0 1
chr19:43626857|43627235 hsa-miR-186-5p 0 0 1
chr19:43626857|43627235 hsa-miR-186-3p 0 0 1
chr19:43626857|43627235 hsa-miR-326 0 1 1
chr19:43626857|43627235 hsa-miR-506-5p 0 0 1
chr19:43626857|43627235 hsa-miR-506-3p 0 0 1
chr19:43626857|43627235 hsa-miR-558 0 1 1
chr19:43626857|43627235 hsa-miR-609 0 0 1
chr19:43626857|43627235 hsa-miR-637 0 0 1
chr19:43626857|43627235 hsa-miR-765 1 1 1
chr19:43626857|43627235 hsa-miR-541-5p 0 0 1
chr19:43626857|43627235 hsa-miR-541-3p 0 0 1
chr19:43626857|43627235 hsa-miR-665 0 0 1
chr19:43626857|43627235 hsa-miR-1253 0 0 1
chr19:43626857|43627235 hsa-miR-1265 0 0 1
chr19:43626857|43627235 hsa-miR-1266-5p 0 0 1
chr19:43626857|43627235 hsa-miR-1266-3p 0 0 1
chr19:43626857|43627235 hsa-miR-654-5p 0 0 1
chr19:43626857|43627235 hsa-miR-330-3p 0 0 1
chr19:43626857|43627235 hsa-miR-876-3p 0 0 1
chr19:43626857|43627235 hsa-miR-140-3p 0 1 1
chr19:43626857|43627235 hsa-miR-1207-5p 1 1 1
chr19:43626857|43627235 hsa-miR-330-5p 0 1 1
chr19:43626857|43627235 hsa-miR-548c-3p 0 0 1
chr19:43626857|43627235 hsa-miR-323-5p 0 0 1
chr19:43626857|43627235 hsa-miR-124 0 0 1
chr19:43626857|43627235 hsa-miR-184 1 0 0
chr19:43626857|43627235 hsa-miR-644a 1 0 0
chr19:43626857|43627235 hsa-miR-663a 1 0 0
chr19:43626857|43627235 hsa-miR-298 1 0 0
chr19:43626857|43627235 hsa-miR-1268a 1 0 0
chr19:43626857|43627235 hsa-miR-1275 1 0 0
chr19:43626857|43627235 hsa-miR-1471 1 0 0
chr19:43626857|43627235 hsa-miR-2861 1 0 0
chr19:43626857|43627235 hsa-miR-3132 1 0 0
chr19:43626857|43627235 hsa-miR-3154 1 1 0
chr19:43626857|43627235 hsa-miR-3175 1 1 0
chr19:43626857|43627235 hsa-miR-3185 1 0 0
chr19:43626857|43627235 hsa-miR-3197 1 0 0
chr19:43626857|43627235 hsa-miR-4322 1 1 0
chr19:43626857|43627235 hsa-miR-4270 0 1 0
chr19:43626857|43627235 hsa-miR-4281 1 0 0
chr19:43626857|43627235 hsa-miR-3909 0 1 0
chr19:43626857|43627235 hsa-miR-3919 0 1 0
chr19:43626857|43627235 hsa-miR-3936 1 1 0
chr19:43626857|43627235 hsa-miR-1268b 1 0 0
chr19:43626857|43627235 hsa-miR-4434 0 1 0
chr19:43626857|43627235 hsa-miR-4440 1 0 0
chr19:43626857|43627235 hsa-miR-4441 1 1 0
chr19:43626857|43627235 hsa-miR-4487 0 1 0
chr19:43626857|43627235 hsa-miR-4488 1 0 0
chr19:43626857|43627235 hsa-miR-4489 0 1 0
chr19:43626857|43627235 hsa-miR-4516 0 1 0
chr19:43626857|43627235 hsa-miR-4533 1 0 0
chr19:43626857|43627235 hsa-miR-4534 1 0 0
chr19:43626857|43627235 hsa-miR-4644 1 1 0
chr19:43626857|43627235 hsa-miR-4651 1 0 0
chr19:43626857|43627235 hsa-miR-4658 1 1 0
chr19:43626857|43627235 hsa-miR-4674 0 1 0
chr19:43626857|43627235 hsa-miR-4689 1 0 0
chr19:43626857|43627235 hsa-miR-4706 1 0 0
chr19:43626857|43627235 hsa-miR-4739 1 1 0
chr19:43626857|43627235 hsa-miR-4784 1 1 0
chr19:43626857|43627235 hsa-miR-5093 1 0 0
chr19:43626857|43627235 hsa-miR-5194 1 1 0
chr19:43626857|43627235 hsa-miR-5698 1 1 0
chr19:43626857|43627235 hsa-miR-5703 1 1 0
chr19:43626857|43627235 hsa-miR-5739 1 0 0
chr19:43626857|43627235 hsa-miR-5787 1 0 0
chr19:43626857|43627235 hsa-miR-6088 1 0 0
chr19:43626857|43627235 hsa-miR-6090 1 0 0
chr19:43626857|43627235 hsa-miR-6165 1 0 0
chr19:43626857|43627235 hsa-miR-7150 1 1 0
chr19:43626857|43627235 hsa-miR-7515 0 1 0
chr19:43626857|43627235 hsa-miR-8085 1 1 0
chr19:43626857|43627235 hsa-miR-12118 1 1 0
chr19:43626857|43627235 hsa-miR-4433b-3p 1 0 0
chr19:43626857|43627235 hsa-miR-122-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6734-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3150a-3p 1 0 0
chr19:43626857|43627235 hsa-miR-7106-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6825-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6894-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6799-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6510-5p 1 1 0
chr19:43626857|43627235 hsa-miR-766-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3622a-5p 0 1 0
chr19:43626857|43627235 hsa-miR-4768-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6880-5p 1 0 0
chr19:43626857|43627235 hsa-miR-7847-3p 1 0 0
chr19:43626857|43627235 hsa-miR-4695-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6746-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6730-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6741-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3622b-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6759-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6721-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4655-5p 1 0 0
chr19:43626857|43627235 hsa-miR-197-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3605-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6768-5p 1 0 0
chr19:43626857|43627235 hsa-miR-1292-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3180-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6772-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6793-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6796-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6732-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6798-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6760-5p 1 1 0
chr19:43626857|43627235 hsa-miR-2467-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6782-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3150b-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6882-3p 0 1 0
chr19:43626857|43627235 hsa-miR-4436b-5p 0 1 0
chr19:43626857|43627235 hsa-miR-615-5p 1 1 0
chr19:43626857|43627235 hsa-miR-7109-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3186-5p 1 0 0
chr19:43626857|43627235 hsa-miR-193b-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6753-5p 0 1 0
chr19:43626857|43627235 hsa-miR-6514-3p 0 1 0
chr19:43626857|43627235 hsa-miR-1908-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6823-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4756-3p 0 1 0
chr19:43626857|43627235 hsa-miR-3677-3p 1 0 0
chr19:43626857|43627235 hsa-miR-4732-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6847-5p 1 0 0
chr19:43626857|43627235 hsa-miR-149-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6717-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6830-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6824-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3162-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6886-5p 0 1 0
chr19:43626857|43627235 hsa-miR-6878-5p 1 1 0
chr19:43626857|43627235 hsa-miR-7846-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6832-5p 1 1 0
chr19:43626857|43627235 hsa-miR-4632-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6868-5p 0 1 0
chr19:43626857|43627235 hsa-miR-483-5p 1 0 0
chr19:43626857|43627235 hsa-miR-2277-5p 1 0 0
chr19:43626857|43627235 hsa-miR-3664-3p 0 1 0
chr19:43626857|43627235 hsa-miR-4763-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6769b-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6778-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6787-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6816-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6865-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6870-5p 1 0 0
chr19:43626857|43627235 hsa-miR-1343-5p 1 0 0
chr19:43626857|43627235 hsa-miR-5001-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6743-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6754-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6756-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6769a-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6803-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6815-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6842-5p 1 0 0
chr19:43626857|43627235 hsa-miR-10401-5p 1 0 0
chr19:43626857|43627235 hsa-miR-11181-3p 1 1 0
chr19:43626857|43627235 hsa-miR-1249-5p 0 1 0
chr19:43626857|43627235 hsa-miR-6722-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6751-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6779-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6797-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6808-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6879-5p 1 0 0
chr19:43626857|43627235 hsa-miR-7111-5p 1 1 0
chr19:43626857|43627235 hsa-miR-4728-5p 1 1 0
chr19:43626857|43627235 hsa-miR-5196-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6780b-5p 1 0 0
chr19:43626857|43627235 hsa-miR-10396a-5p 1 0 0
chr19:43626857|43627235 hsa-miR-10396b-5p 1 0 0
chr19:43626857|43627235 hsa-miR-10526-3p 1 1 0
chr19:43626857|43627235 hsa-miR-1237-5p 1 0 0
chr19:43626857|43627235 hsa-miR-1909-3p 1 1 0
chr19:43626857|43627235 hsa-miR-328-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4649-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4685-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4725-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6729-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6735-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6738-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6794-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6795-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6858-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6883-5p 1 1 0
chr19:43626857|43627235 hsa-miR-4723-5p 1 0 0
chr19:43626857|43627235 hsa-miR-939-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4758-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6511a-5p 1 0 0
chr19:43626857|43627235 hsa-miR-30c-1-3p 1 0 0
chr19:43626857|43627235 hsa-miR-6731-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6758-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6856-5p 1 1 0
chr19:43626857|43627235 hsa-miR-1914-3p 1 0 0
chr19:43626857|43627235 hsa-miR-324-3p 0 1 0
chr19:43626857|43627235 hsa-miR-3679-5p 1 0 0
chr19:43626857|43627235 hsa-miR-4646-5p 1 0 0
chr19:43626857|43627235 hsa-miR-6891-5p 1 1 0
chr19:43626857|43627235 hsa-miR-4716-3p 1 1 0
chr19:43626857|43627235 hsa-miR-6750-5p 0 1 0
chr19:43626857|43627235 hsa-miR-6785-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6790-5p 1 1 0
chr19:43626857|43627235 hsa-miR-6762-5p 0 1 0
chr19:43626857|43627235 hsa-miR-6822-5p 0 1 0
chr19:43626857|43627235 hsa-miR-9851-5p 0 1 0
chr19:43626857|43627235 hsa-miR-10401-3p 1 1 0
chr19:43626857|43627235 hsa-miR-4670-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:43626857|43627235
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MGPWFPMVAGNRQLDRFEPTFVPSLTPYFPSPCGSGPRESCGGGPGAGGRGRRGG
Nucleotide Sequence CTGGGACCCTGGTTCCCTATGGTCGCTGGGAACAGGCAGCTCGATCGCTTTGAGCCCACGTTCGTGCCTTCTTTAACCCCTTACTTCCCTTCTCCCTGCGGCAGTGGCCCCAGAGAATCCTGTGGTGGAGGTCCGGGAGCAGGCGGTAGAGGGCGGCGAGGTGGA
CircID chr19:43626857|43627235
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MAIFNILDGHLAPDLSPLTPATWDPGSLWSLGTGSSIALSPRSCLL
Nucleotide Sequence ATGGCTATTTTTAACATCCTGGATGGGCATCTGGCTCCTGACCTCTCCCCTTTGACCCCTGCCACCTGGGACCCTGGTTCCCTATGGTCGCTGGGAACAGGCAGCTCGATCGCTTTGAGCCCACGTTCGTGCCTTCTTTAA
CircID chr19:43626857|43627235
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MLLSSPETFRPWLFLTSWMGIWLLTSPL
Nucleotide Sequence CTGCTTCTCTCTTCTCCTGAGACTTTCAGACCATGGCTATTTTTAACATCCTGGATGGGCATCTGGCTCCTGACCTCTCCCCTTTGA
CircID chr19:43626857|43627235
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MLPDLHHRILWGHCRREKGSKGLKKARTWAQSDRAACSQRP
Nucleotide Sequence CTGCTCCCGGACCTCCACCACAGGATTCTCTGGGGCCACTGCCGCAGGGAGAAGGGAAGTAAGGGGTTAAAGAAGGCACGAACGTGGGCTCAAAGCGATCGAGCTGCCTGTTCCCAGCGACCATAG
CircID chr19:43626857|43627235
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MPIQDVKNSHGLKVSGEERSREERRRGCV
Nucleotide Sequence ATGCCCATCCAGGATGTTAAAAATAGCCATGGTCTGAAAGTCTCAGGAGAAGAGAGAAGCAGAGAAGAAAGGAGGAGAGGATGCGTCTGA
CircID chr19:43626857|43627235
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MPVPSDHREPGSQVAGVKGERSGARCPSRMLKIAMV
Nucleotide Sequence CTGCCTGTTCCCAGCGACCATAGGGAACCAGGGTCCCAGGTGGCAGGGGTCAAAGGGGAGAGGTCAGGAGCCAGATGCCCATCCAGGATGTTAAAAATAGCCATGGTCTGA
CircID chr19:43626857|43627235
ORF Type ORF7
Protein Length 29
Nucleotide Length 90
Protein Sequence MFPATIGNQGPRWQGSKGRGQEPDAHPGC
Nucleotide Sequence CTGTTCCCAGCGACCATAGGGAACCAGGGTCCCAGGTGGCAGGGGTCAAAGGGGAGAGGTCAGGAGCCAGATGCCCATCCAGGATGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab