CircNet

General Information

circRNA Basic Information

CircID	chr19:43648964\|43649086
Strand	+
CircType	exon
Host Gene	ENSG00000011422.10;
Algorism	CIRI2;
Sequence	ATGCCCACCTGGGTGACGCCTTCAGCATGAACCACATTGATGTCTCCTGCTGTACTAAAAGTGGCTGTAACCACCCAGACCTGGATGTCCAGTACCGCAGTGGGGCTGCTCCTCAGCCTGGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:43648964\|43649086	hsa-miR-214-5p	0	0	1
chr19:43648964\|43649086	hsa-miR-214-3p	0	0	1
chr19:43648964\|43649086	hsa-miR-541-5p	0	0	1
chr19:43648964\|43649086	hsa-miR-541-3p	0	0	1
chr19:43648964\|43649086	hsa-miR-1206	0	0	1
chr19:43648964\|43649086	hsa-miR-1293	0	0	1
chr19:43648964\|43649086	hsa-miR-1243	0	0	1
chr19:43648964\|43649086	hsa-miR-654-5p	0	0	1
chr19:43648964\|43649086	hsa-miR-409-5p	0	0	1
chr19:43648964\|43649086	hsa-miR-876-3p	0	0	1
chr19:43648964\|43649086	hsa-miR-4323	0	1	0
chr19:43648964\|43649086	hsa-miR-4286	0	1	0
chr19:43648964\|43649086	hsa-miR-3929	0	1	0
chr19:43648964\|43649086	hsa-miR-4755-3p	0	1	0
chr19:43648964\|43649086	hsa-miR-3186-5p	0	1	0
chr19:43648964\|43649086	hsa-miR-7156-3p	0	1	0
chr19:43648964\|43649086	hsa-miR-4758-3p	0	1	0
chr19:43648964\|43649086	hsa-miR-1343-5p	1	1	0
chr19:43648964\|43649086	hsa-miR-6722-3p	1	0	0
chr19:43648964\|43649086	hsa-miR-1909-3p	1	0	0
chr19:43648964\|43649086	hsa-miR-324-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:43648964\|43649086
ORF Type	ORF1
Protein Length	29
Nucleotide Length	87
Protein Sequence	MMSPAVLKVAVTTQTWMSSTAVGLLLSLA
Nucleotide Sequence	TTGATGTCTCCTGCTGTACTAAAAGTGGCTGTAACCACCCAGACCTGGATGTCCAGTACCGCAGTGGGGCTGCTCCTCAGCCTGGCC

CircID	chr19:43648964\|43649086
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPG
Nucleotide Sequence	CTGGGTGACGCCTTCAGCATGAACCACATTGATGTCTCCTGCTGTACTAAAAGTGGCTGTAACCACCCAGACCTGGATGTCCAGTACCGCAGTGGGGCTGCTCCTCAGCCTGGC

CircID	chr19:43648964\|43649086
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MRSSPTAVLDIQVWVVTATFSTAGDINVVHAEGVTQVG
Nucleotide Sequence	CTGAGGAGCAGCCCCACTGCGGTACTGGACATCCAGGTCTGGGTGGTTACAGCCACTTTTAGTACAGCAGGAGACATCAATGTGGTTCATGCTGAAGGCGTCACCCAGGTGGGC

CircID	chr19:43648964\|43649086
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MRYWTSRSGWLQPLLVQQETSMWFMLKASPRWA
Nucleotide Sequence	CTGCGGTACTGGACATCCAGGTCTGGGTGGTTACAGCCACTTTTAGTACAGCAGGAGACATCAATGTGGTTCATGCTGAAGGCGTCACCCAGGTGGGCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information